Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83592437

Identifier: 83592437

GI number: 83592437

Start: 1292422

End: 1294488

Strand: Reverse

Name: 83592437

Synonym: Rru_A1101

Alternate gene names: NA

Gene position: 1294488-1292422 (Counterclockwise)

Preceding gene: 83592445

Following gene: 83592417

Centisome position: 29.74

GC content: 68.89

Gene sequence:

>2067_bases
ATGTCCTTCCCCCGTTCCCGCCCGGCCTTCGCCGCCGTCCTGCTGGCCGCCACGGCGCTGGCCTCGCCGGCTTTGGCCGA
CGGGCCGCTGACCTTGAAGCGGGTGCTGCTGTCCACCGGTGGCGTCGGCCTGTTCGAATACGAAGCCAAGGTCGACGGAT
CAACCGCCCTGCCTTTGACCGTTCGCCTTGATCAGGTCGATGACGTTTTGAAAAGCCTGAGCGTCGACGATCCCTCGGGC
CGGCCGGCCAGCGTCCGTCTGGCGGTGCGCGAGCCGTTGTCCGAGGTGTTTCGCGATCTGCCCTTCGCCGAAGACGCCTT
CCAGTCGCCCGCCGCCCTGTTCGAGGCCCTCAAGGGCGAACCGGTGACGATCAGCGGCCCGCAGGTGATGAGCGGACGGA
TCGTTTCCGTTACCCCCGAAGTCACCACCCGCCCCGATGGCTCCGCGCAAACCCGCCATCGCCTGGGGCTGATGACCAAC
GACGGCCTGCGCCAAGTCATTTTGGAAGACGCCCAGGGCGTGGCCTTCAGCGATTCGGCGCTGACCGCGCGCATCGAACG
CGCCCTGGCCGCCATGGCCCATCTGCGCGAAAAGGACAGCCGCACCCTTGATATCGCCGTGGACGGCACGGGATCGCGGG
CGGTCCGCGCCAGCTTCATCGCCGAGGTGCCGCTGTGGAAAGCCGGCTATCGCCTGACTTTGCCGGCGGAGGGTGCCAAC
GCCAAGGAGAAGGCCAAGCTCGCCGGTTGGGCGGTGCTTGAAAACCTCAGCGGCCAGGACTGGAAGGACGTGAGCCTGAC
CGTGGTCTCGGGCAATCCGGTGACTTTCCGCCAGGATCTGTTCACCCCCTATCGCATCGACCGGCCGACCGTTCCCGTCG
AGGTTCAGGGCCGGGTGCTGCCCACCCCCGATAGCGGCGCCCAGCCCCAGGCCGACGCGGCGGCGGGGATGATGCGCAGC
TTCGCCAAAAGCGCAACGCCGATGGCGATGGCCGCCGCCCCCGCCGCGCCCGACGAGGCGATGGCTGAATCCGGCCAATT
GGCCTCCCCGGGCCTGGGTGGCGGACAGGCCGCCGCCCTGCCGTTGCCCAGCGAAGGCACGGCCCAGGTGCTGTTCACCC
TGCCCCAGCCGGTCACCCTGGCCAATGGTCAGACGCTGATGGTACCGATTACCGAATCGGCGATCCCCTTGCGGCGGATC
GCCCATTACCGCCCGGGCGAAAGCGGCCGCCATCCCTTGGCCGCCGTCGATCTTACCAACGCCACCGGCACCGCCCTGCC
GCCGGGCGCGGTCAGCCTGACCCAGGCGACGAGCGGTGGTCTGGCCTATCTGGGCGATGCCCGCCTGGGCCCGGTCGCCA
AGGGCGATCACCGCATTCTGGCCTTCGCCGTCGATCAGGATATCACGGTTGGCGAGGAGACCGGCGAGGACCGCACGGTG
TCCGGGCTGACGGCTTCGGCGGGGGTTCTGACCCTGCGTCAGGTGGCGCGCAGCCAGACCACCTATACCCTGACCAATAA
CGCCGGCGTCGAGCGTCGTCTGGTGATCGACCACCCCCGGCGCCCGGGCTGGATCCTGACCCCGCCCCAGGGTACCGATA
CGGTCGAGGAAATCGGCGATGCCCACCGCCTGTCCGTCACCCTGGAGGCCGGACAAACCCGTGCGCTGACCATCGTTCTC
GAACGGCCGATCGAAGAACGGCTGTCCGCCGGCGCCCTGACCGCGCCGCTGCTCGCCGGCCTCAGCGCGACGGGCAAACT
TTCGGGCCCCGAGAAGCTGACGGTCGAACGCTTGGCCACCTTGTCGGCCCGGGCCTCGCAGATCGACGACCGCCTCGGCG
CCATCCACACCGAAAGCGCCCAGGTGGTCGAGGATCAGGGGCGGCTGCGCGAAAACATCAAGGCGGTGCCGGCCGACAGC
GACCTGCATCAGCGCTTTATGGAGCGTCTGGGCCAGCTTGAAGATCGCCTGGGCAGCCTTGAGCAGCAGGGCAAGGAGAT
GGAGGCCGAGGCCCGCAAGGCCCGCGCCGATCTCGACGCCTATATCGCCGGCCTCACCCTGCCTTAA

Upstream 100 bases:

>100_bases
CTAGCTTTCCTTGCGGGGCGGCCTTTTCCAAGCCCCATCCGCGGCGCGCTTGTTTTTACGCGATTTCCTTTTTCCGCCCA
AGCCAACCGGAGACCCGACG

Downstream 100 bases:

>100_bases
GCGCACCCCCTGGAGGGAGGCGGTACACCCCGCATCCCTCCAGGGCGCCTTGCTTACTGGCTGGCGGTTTCGATCACGGC
GCAGATATCGCCGACCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSG
RPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTN
DGLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN
AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRS
FAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRI
AHYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV
SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVL
ERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADS
DLHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP

Sequences:

>Translated_688_residues
MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSG
RPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTN
DGLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN
AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRS
FAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRI
AHYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV
SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVL
ERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADS
DLHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP
>Mature_687_residues
SFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLTVRLDQVDDVLKSLSVDDPSGR
PASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGEPVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTND
GLRQVILEDAQGVAFSDSALTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGANA
KEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVLPTPDSGAQPQADAAAGMMRSF
AKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAALPLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIA
HYRPGESGRHPLAAVDLTNATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTVS
GLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGDAHRLSVTLEAGQTRALTIVLE
RPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLATLSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSD
LHQRFMERLGQLEDRLGSLEQQGKEMEAEARKARADLDAYIAGLTLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72548; Mature: 72417

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLT
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE
VRLDQVDDVLKSLSVDDPSGRPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGE
EEHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCC
PVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTNDGLRQVILEDAQGVAFSDSA
CEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCEECCHH
LTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC
AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCCCCCCEEECCEEE
PTPDSGAQPQADAAAGMMRSFAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAAL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEE
PLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIAHYRPGESGRHPLAAVDLTN
CCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECC
ATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV
CCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE
SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGD
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCC
AHRLSVTLEAGQTRALTIVLERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLAT
CEEEEEEEECCCCEEEEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSDLHQRFMERLGQLEDRLGSL
HHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EQQGKEMEAEARKARADLDAYIAGLTLP
HHHCHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
SFPRSRPAFAAVLLAATALASPALADGPLTLKRVLLSTGGVGLFEYEAKVDGSTALPLT
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEE
VRLDQVDDVLKSLSVDDPSGRPASVRLAVREPLSEVFRDLPFAEDAFQSPAALFEALKGE
EEHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCC
PVTISGPQVMSGRIVSVTPEVTTRPDGSAQTRHRLGLMTNDGLRQVILEDAQGVAFSDSA
CEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCEECCHH
LTARIERALAAMAHLREKDSRTLDIAVDGTGSRAVRASFIAEVPLWKAGYRLTLPAEGAN
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCC
AKEKAKLAGWAVLENLSGQDWKDVSLTVVSGNPVTFRQDLFTPYRIDRPTVPVEVQGRVL
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEHHHCCCCEECCCCCCCEEECCEEE
PTPDSGAQPQADAAAGMMRSFAKSATPMAMAAAPAAPDEAMAESGQLASPGLGGGQAAAL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEE
PLPSEGTAQVLFTLPQPVTLANGQTLMVPITESAIPLRRIAHYRPGESGRHPLAAVDLTN
CCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECC
ATGTALPPGAVSLTQATSGGLAYLGDARLGPVAKGDHRILAFAVDQDITVGEETGEDRTV
CCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE
SGLTASAGVLTLRQVARSQTTYTLTNNAGVERRLVIDHPRRPGWILTPPQGTDTVEEIGD
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCHHHHCCC
AHRLSVTLEAGQTRALTIVLERPIEERLSAGALTAPLLAGLSATGKLSGPEKLTVERLAT
CEEEEEEEECCCCEEEEEEEECCHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LSARASQIDDRLGAIHTESAQVVEDQGRLRENIKAVPADSDLHQRFMERLGQLEDRLGSL
HHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EQQGKEMEAEARKARADLDAYIAGLTLP
HHHCHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA