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The map label for this gene is mcp4 [H]

Identifier: 83592445

GI number: 83592445

Start: 1303469

End: 1305169

Strand: Reverse

Name: mcp4 [H]

Synonym: Rru_A1109

Alternate gene names: 83592445

Gene position: 1305169-1303469 (Counterclockwise)

Preceding gene: 83592446

Following gene: 83592437

Centisome position: 29.98

GC content: 65.73

Gene sequence:

>1701_bases
ATGCTTCGCAATCTCTCGATCCTTAATCGCCTTCTCGGCCTGGGGGCGCTCGTCCTTCTTACGCTGGCCTTGGTTGTTTT
CATCGGCCTGAGCGCCACCACCCGAGCGCGGATGGACGACAGAAAAGCCACCTTGCACATGCTGTCGGAAACGGCGATCA
GCACCATGGGCCAATACAAGGCCCGGGCGGACGCCGGCGAGCTATCCTTGGCCGAAGCCCGCGATCAGGCGCTCAAGGCC
CTGGGCAAGATCACCTACGACAACGGCAATTACTTTTTCGCCGCCGATGAGAAGGGTGTTCTGTTGGTCCACCCGACCCG
CCCCAAGGAAATCGGCATGAACATGCTCGAAAAGGGCGATCCGGGGCTCAAATCCCTCTACACCCAGCTTATTTCCCTGG
CGACGACCACCGGGGCGACCGGCGGTTTTTTTGAAAGCATGGGGCGGCGACCGGGATCGACGGAGAACAACACGCCCAAG
CTTTTCATCGCCATTCGCGACCCCAGCTTCGGCGCCCTGATGGCGACGGGCCTGTTCATCGACGACATCCGGGCCGAGAA
CGCCCGTCAGGCCTGGACGGTCGGCCTGCTGGCCGCCGCCGCCGCGCTGTGCCTGTTCGCCATCGGCTTCCTGGTCGTGC
GCAGCATCACCCGGCCGTTGGGTACGGTGATCCTCGGCCTGGAGACCCTGACCAAGGGCGACTACGACCACCACCTTGAT
GTGGCGCAGTCGCGGTCGGAAATCGGCCTGCTCGCCCGCTCCTTCGAACACCTGCGCGAGCTTCTGCAAGGGGCCGAACG
GCTGCGCCGCGAGCGCGATCAGGAAGCCGAGCGCATCGCCGGCGAGCGCCGGTCCGAAATGCTGGCCCTGGCCCTGCATT
TCGAAGCCGAAGTCGGCGATCTGGTGACCGGGGTGACCGAAGCCTCGCGGACCCTCAAGGCCTCGGCGGCGCAAATGACC
GACGACGCCTCGCAAACCCTGCAACAATCCTCGGCGGTCGCCCGCTCCTCGCGGCAATCCTCGTCGAACACCCAGACGGT
GGCGGCGGCGACCGAGGAGCTTTCAAGCTCGATCCAGGAAATCAGCCGTCAGGCCGGCCAGTCGAGCGCCTTGGCGCAAT
CGGCGGTCAGCCGGGTCAATGAAACCAGCACCACGGTCGACTCGCTCAACGCCGCCGCCCAACGCGTGGGCGACGTGGTG
CGCTTGATTTCCGATATCGCCAGCCAAACCAATCTGCTGGCGCTCAACGCCACCATCGAGGCGGCGCGGGCGGGAGCGGC
CGGCAAGGGCTTCGCCGTGGTGGCGGGCGAGGTCAAGACCCTGGCCAATCAGACCAGCAAGGCCACCGAGGACATCGCCC
GCCACATCGAGGAAATCCAGTCGGTGACTCGCAGCACCGTCAGCGCCACCGGCGACATTGGCACATCGGTCACCACGCTC
TGCGAGGTCGCCGGGATGATCGCCGCCGCCGTGGAACAGCAAAACGCCGCGACCAAAGAGATTTCCCACAACGTCCATCT
CGCCGAGACCGCCTCTCAGGAGGTCACCTCGGCGATCGGCGCGGTTGAAACGGCGGCCCGCAACAGCGGCCAGACCGCCG
CCGACGTTCTGACCTCGGCCGATGCCCTCTCGGCCCAAAGCGCCCGCCTGCAAGGCGCGGTCAGCGCCTTCCTCAGCCAT
ATCCGCAGCACCCAAGGATAG

Upstream 100 bases:

>100_bases
TCAATAAAAATGGGCTTATTTCGATTTTTTTACCGAATTCTTAAGACCCTTCGCAACTATGAATGGCTTGATGACGCTCG
GTTCCTGGAGTCCAAGCCAG

Downstream 100 bases:

>100_bases
GACGATCCTTGGCGCACGATGAGAGCGGTATGCGTGAAATCTCGTCCGCGCACACCGCTCTAATGTATTGATAGTGAAGA
AGATAATCGTCCCGACATGG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MLRNLSILNRLLGLGALVLLTLALVVFIGLSATTRARMDDRKATLHMLSETAISTMGQYKARADAGELSLAEARDQALKA
LGKITYDNGNYFFAADEKGVLLVHPTRPKEIGMNMLEKGDPGLKSLYTQLISLATTTGATGGFFESMGRRPGSTENNTPK
LFIAIRDPSFGALMATGLFIDDIRAENARQAWTVGLLAAAAALCLFAIGFLVVRSITRPLGTVILGLETLTKGDYDHHLD
VAQSRSEIGLLARSFEHLRELLQGAERLRRERDQEAERIAGERRSEMLALALHFEAEVGDLVTGVTEASRTLKASAAQMT
DDASQTLQQSSAVARSSRQSSSNTQTVAAATEELSSSIQEISRQAGQSSALAQSAVSRVNETSTTVDSLNAAAQRVGDVV
RLISDIASQTNLLALNATIEAARAGAAGKGFAVVAGEVKTLANQTSKATEDIARHIEEIQSVTRSTVSATGDIGTSVTTL
CEVAGMIAAAVEQQNAATKEISHNVHLAETASQEVTSAIGAVETAARNSGQTAADVLTSADALSAQSARLQGAVSAFLSH
IRSTQG

Sequences:

>Translated_566_residues
MLRNLSILNRLLGLGALVLLTLALVVFIGLSATTRARMDDRKATLHMLSETAISTMGQYKARADAGELSLAEARDQALKA
LGKITYDNGNYFFAADEKGVLLVHPTRPKEIGMNMLEKGDPGLKSLYTQLISLATTTGATGGFFESMGRRPGSTENNTPK
LFIAIRDPSFGALMATGLFIDDIRAENARQAWTVGLLAAAAALCLFAIGFLVVRSITRPLGTVILGLETLTKGDYDHHLD
VAQSRSEIGLLARSFEHLRELLQGAERLRRERDQEAERIAGERRSEMLALALHFEAEVGDLVTGVTEASRTLKASAAQMT
DDASQTLQQSSAVARSSRQSSSNTQTVAAATEELSSSIQEISRQAGQSSALAQSAVSRVNETSTTVDSLNAAAQRVGDVV
RLISDIASQTNLLALNATIEAARAGAAGKGFAVVAGEVKTLANQTSKATEDIARHIEEIQSVTRSTVSATGDIGTSVTTL
CEVAGMIAAAVEQQNAATKEISHNVHLAETASQEVTSAIGAVETAARNSGQTAADVLTSADALSAQSARLQGAVSAFLSH
IRSTQG
>Mature_566_residues
MLRNLSILNRLLGLGALVLLTLALVVFIGLSATTRARMDDRKATLHMLSETAISTMGQYKARADAGELSLAEARDQALKA
LGKITYDNGNYFFAADEKGVLLVHPTRPKEIGMNMLEKGDPGLKSLYTQLISLATTTGATGGFFESMGRRPGSTENNTPK
LFIAIRDPSFGALMATGLFIDDIRAENARQAWTVGLLAAAAALCLFAIGFLVVRSITRPLGTVILGLETLTKGDYDHHLD
VAQSRSEIGLLARSFEHLRELLQGAERLRRERDQEAERIAGERRSEMLALALHFEAEVGDLVTGVTEASRTLKASAAQMT
DDASQTLQQSSAVARSSRQSSSNTQTVAAATEELSSSIQEISRQAGQSSALAQSAVSRVNETSTTVDSLNAAAQRVGDVV
RLISDIASQTNLLALNATIEAARAGAAGKGFAVVAGEVKTLANQTSKATEDIARHIEEIQSVTRSTVSATGDIGTSVTTL
CEVAGMIAAAVEQQNAATKEISHNVHLAETASQEVTSAIGAVETAARNSGQTAADVLTSADALSAQSARLQGAVSAFLSH
IRSTQG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=292, Percent_Identity=32.1917808219178, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI2367378, Length=339, Percent_Identity=28.3185840707965, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1788194, Length=224, Percent_Identity=37.0535714285714, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1787690, Length=370, Percent_Identity=26.2162162162162, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1789453, Length=128, Percent_Identity=42.1875, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59665; Mature: 59665

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNLSILNRLLGLGALVLLTLALVVFIGLSATTRARMDDRKATLHMLSETAISTMGQYK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARADAGELSLAEARDQALKALGKITYDNGNYFFAADEKGVLLVHPTRPKEIGMNMLEKGD
HCCCCCCHHHHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEECCCCCHHHCHHHHHCCC
PGLKSLYTQLISLATTTGATGGFFESMGRRPGSTENNTPKLFIAIRDPSFGALMATGLFI
CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
DDIRAENARQAWTVGLLAAAAALCLFAIGFLVVRSITRPLGTVILGLETLTKGDYDHHLD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VAQSRSEIGLLARSFEHLRELLQGAERLRRERDQEAERIAGERRSEMLALALHFEAEVGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTGVTEASRTLKASAAQMTDDASQTLQQSSAVARSSRQSSSNTQTVAAATEELSSSIQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ISRQAGQSSALAQSAVSRVNETSTTVDSLNAAAQRVGDVVRLISDIASQTNLLALNATIE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHH
AARAGAAGKGFAVVAGEVKTLANQTSKATEDIARHIEEIQSVTRSTVSATGDIGTSVTTL
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CEVAGMIAAAVEQQNAATKEISHNVHLAETASQEVTSAIGAVETAARNSGQTAADVLTSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DALSAQSARLQGAVSAFLSHIRSTQG
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRNLSILNRLLGLGALVLLTLALVVFIGLSATTRARMDDRKATLHMLSETAISTMGQYK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARADAGELSLAEARDQALKALGKITYDNGNYFFAADEKGVLLVHPTRPKEIGMNMLEKGD
HCCCCCCHHHHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEECCCCCHHHCHHHHHCCC
PGLKSLYTQLISLATTTGATGGFFESMGRRPGSTENNTPKLFIAIRDPSFGALMATGLFI
CCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
DDIRAENARQAWTVGLLAAAAALCLFAIGFLVVRSITRPLGTVILGLETLTKGDYDHHLD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VAQSRSEIGLLARSFEHLRELLQGAERLRRERDQEAERIAGERRSEMLALALHFEAEVGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTGVTEASRTLKASAAQMTDDASQTLQQSSAVARSSRQSSSNTQTVAAATEELSSSIQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ISRQAGQSSALAQSAVSRVNETSTTVDSLNAAAQRVGDVVRLISDIASQTNLLALNATIE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHH
AARAGAAGKGFAVVAGEVKTLANQTSKATEDIARHIEEIQSVTRSTVSATGDIGTSVTTL
HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CEVAGMIAAAVEQQNAATKEISHNVHLAETASQEVTSAIGAVETAARNSGQTAADVLTSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DALSAQSARLQGAVSAFLSHIRSTQG
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]