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The map label for this gene is ymdB [H]

Identifier: 83592421

GI number: 83592421

Start: 1275623

End: 1276441

Strand: Direct

Name: ymdB [H]

Synonym: Rru_A1085

Alternate gene names: 83592421

Gene position: 1275623-1276441 (Clockwise)

Preceding gene: 83592420

Following gene: 161777627

Centisome position: 29.31

GC content: 66.54

Gene sequence:

>819_bases
ATGAACATCCTTTATTGTGGCGATGTCGTCGGCCGTTCGGGGCGAACGGCGCTGCTCGACGCGCTGCCCGGCCTGAAAAA
GGATCTGGCCCTGGATCTGGTGGTGGTCTGCGGGGAAAACTCCGCCCACGGCTTTGGCATTTCGACCAAGATCTGCGACG
AGTTCCTGGCGGCGGGTATCGATGTGGTCACCACCGGCAATCACGTGTGGGACCAGCGCGAGATCCTGCCCTATCTCGAT
CGCCAGCACCGGCTGATCCGCCCGGCCAATTTCCCCCCCGGCACCCCCGGCGTCGGTCATGTCGTCGTCGATCTGGCGCG
CGGCCGCAAGGCGCTGGTCATCCAGGTGATGGGCCGTTTGTTCATGGATCCGCTTGATTGCCCCTTCCGCGCCGTCGACG
AGGTGCTGACGCGCTATCGCCTGGGGGCGACGGTGCAGGCGGTGATCGTCGATATCCACGCCGAGGCGACCAGCGAAAAG
ATGGCGATGGGCCACCATTGCGACGGCCGGGTCTCGCTGGTGGTCGGCAGCCATTCCCATGTGCCGACCGCCGATGCCCG
GGTGCTCAAGGGCGGCAGCGGGTATATGAGCGATGCCGGCATGTGCGGCGATTATCAATCGGTGATCGGCATGGTTCCCG
GCCCGGCCGTCCATCGCTTCACCCGCAAGACGCCCACCGATCGCCTGACGCCGGCCGATGGTCCGGGCACGGTTTGCGGG
GTTTTCGTCCAGACCGATGATCGCAGCGGTTTGGCCCTGCGCTGCGAGCCGGTCCGCCTGGGCGGCGATCTCGCCCCGGC
GATGCCGATCGCGCGCTAG

Upstream 100 bases:

>100_bases
TGCCCGTCGAACCCCACGACCGTCCCCTTGACGGGGTAATCACCGAAGCCGGCGTCCGCTGGTTTGGCGAGTGGCCGAGG
CCCGATATGGAGCGGAAGCG

Downstream 100 bases:

>100_bases
AATCTTGATATCGAAGCAAATCATCGTCGCACTCGGGGCCGGAGCGCCCGGGATTTTCTCCCGGCCGGCCCGCTAAGGCC
CAGCCCCGGCAGGGGAACCC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNILYCGDVVGRSGRTALLDALPGLKKDLALDLVVVCGENSAHGFGISTKICDEFLAAGIDVVTTGNHVWDQREILPYLD
RQHRLIRPANFPPGTPGVGHVVVDLARGRKALVIQVMGRLFMDPLDCPFRAVDEVLTRYRLGATVQAVIVDIHAEATSEK
MAMGHHCDGRVSLVVGSHSHVPTADARVLKGGSGYMSDAGMCGDYQSVIGMVPGPAVHRFTRKTPTDRLTPADGPGTVCG
VFVQTDDRSGLALRCEPVRLGGDLAPAMPIAR

Sequences:

>Translated_272_residues
MNILYCGDVVGRSGRTALLDALPGLKKDLALDLVVVCGENSAHGFGISTKICDEFLAAGIDVVTTGNHVWDQREILPYLD
RQHRLIRPANFPPGTPGVGHVVVDLARGRKALVIQVMGRLFMDPLDCPFRAVDEVLTRYRLGATVQAVIVDIHAEATSEK
MAMGHHCDGRVSLVVGSHSHVPTADARVLKGGSGYMSDAGMCGDYQSVIGMVPGPAVHRFTRKTPTDRLTPADGPGTVCG
VFVQTDDRSGLALRCEPVRLGGDLAPAMPIAR
>Mature_272_residues
MNILYCGDVVGRSGRTALLDALPGLKKDLALDLVVVCGENSAHGFGISTKICDEFLAAGIDVVTTGNHVWDQREILPYLD
RQHRLIRPANFPPGTPGVGHVVVDLARGRKALVIQVMGRLFMDPLDCPFRAVDEVLTRYRLGATVQAVIVDIHAEATSEK
MAMGHHCDGRVSLVVGSHSHVPTADARVLKGGSGYMSDAGMCGDYQSVIGMVPGPAVHRFTRKTPTDRLTPADGPGTVCG
VFVQTDDRSGLALRCEPVRLGGDLAPAMPIAR

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29013; Mature: 29013

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILYCGDVVGRSGRTALLDALPGLKKDLALDLVVVCGENSAHGFGISTKICDEFLAAGI
CCEEEECHHHCCCCCHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVTTGNHVWDQREILPYLDRQHRLIRPANFPPGTPGVGHVVVDLARGRKALVIQVMGRL
EEEECCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCHHEEEHHCCCHHHHHHHHHHH
FMDPLDCPFRAVDEVLTRYRLGATVQAVIVDIHAEATSEKMAMGHHCDGRVSLVVGSHSH
HCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCC
VPTADARVLKGGSGYMSDAGMCGDYQSVIGMVPGPAVHRFTRKTPTDRLTPADGPGTVCG
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEE
VFVQTDDRSGLALRCEPVRLGGDLAPAMPIAR
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNILYCGDVVGRSGRTALLDALPGLKKDLALDLVVVCGENSAHGFGISTKICDEFLAAGI
CCEEEECHHHCCCCCHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVTTGNHVWDQREILPYLDRQHRLIRPANFPPGTPGVGHVVVDLARGRKALVIQVMGRL
EEEECCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCHHEEEHHCCCHHHHHHHHHHH
FMDPLDCPFRAVDEVLTRYRLGATVQAVIVDIHAEATSEKMAMGHHCDGRVSLVVGSHSH
HCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCC
VPTADARVLKGGSGYMSDAGMCGDYQSVIGMVPGPAVHRFTRKTPTDRLTPADGPGTVCG
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEE
VFVQTDDRSGLALRCEPVRLGGDLAPAMPIAR
EEEEECCCCCEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]