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The map label for this gene is ygfA [C]

Identifier: 83592420

GI number: 83592420

Start: 1274874

End: 1275626

Strand: Direct

Name: ygfA [C]

Synonym: Rru_A1084

Alternate gene names: 83592420

Gene position: 1274874-1275626 (Clockwise)

Preceding gene: 83592419

Following gene: 83592421

Centisome position: 29.29

GC content: 73.31

Gene sequence:

>753_bases
ATGGTGCCCCCGACCGATCCCTTCCCGGACAGCGAGCCGGAAGGTACCGACCCGCCGTCTTCCGGGGGCGCCTCCGCCCC
GTCCTCGCCCCCCTCCTTCGCCACCGTCAAGGCCGGCTTGCGGGCCCAGGCGCGGCGGACGCGCAAGGGGTTGGCCGATG
CCGCCGGCGCCGCTGGCGACAAGGCTCCCGGCGCTCCGCTTTCGCGGGCCACGCCGGCCGGCGCCGCCGCCTTTCACGGC
GCGGCCGATCTGCTGTCGCGGCTGACCACTCCCCACGAGACGATTATCGCCGGTTACTGGCCGATGGCGGGCGAGCTTGA
TCCGCGGCCGCTGATGGCCGCCCTTCATGCCCATGGTTGCCGGCTCGCCCTGCCGGTGGTCGTCGGCCCGGCCTCGGCCC
TGGCCTTTCGCGCCTGGGCGCCGGGCGAACCGGTGGACCAGGGCGCCCTCGGCACCTTCCAGCCGCTGAGCCTCGCCCCA
CTGGTCACCCCCAGCTGGCTGCTGGTGCCGTTGCTGGCTTTTGACGACGCCGGCCATCGTCTGGGGCAGGGCGGCGGGTT
TTATGATCGCACCCTGGCCGGCCTGGGCGCCGCCGGTTCGCCGGTGGTGGCCATCGGCGTCGCCTATGCCGCCCAACAGG
TCGAGGCCTTGCCCGTCGAACCCCACGACCGTCCCCTTGACGGGGTAATCACCGAAGCCGGCGTCCGCTGGTTTGGCGAG
TGGCCGAGGCCCGATATGGAGCGGAAGCGATGA

Upstream 100 bases:

>100_bases
CGGCCGGTATGGCCCCGCACCTTTCCCCGTTCCCATCCCGGCCGATCCTGGCCGGGGGGCGGGGAAAAGTTGTAAGTGCG
TCCCGCCCGAAAGGTTCTCC

Downstream 100 bases:

>100_bases
ACATCCTTTATTGTGGCGATGTCGTCGGCCGTTCGGGGCGAACGGCGCTGCTCGACGCGCTGCCCGGCCTGAAAAAGGAT
CTGGCCCTGGATCTGGTGGT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVPPTDPFPDSEPEGTDPPSSGGASAPSSPPSFATVKAGLRAQARRTRKGLADAAGAAGDKAPGAPLSRATPAGAAAFHG
AADLLSRLTTPHETIIAGYWPMAGELDPRPLMAALHAHGCRLALPVVVGPASALAFRAWAPGEPVDQGALGTFQPLSLAP
LVTPSWLLVPLLAFDDAGHRLGQGGGFYDRTLAGLGAAGSPVVAIGVAYAAQQVEALPVEPHDRPLDGVITEAGVRWFGE
WPRPDMERKR

Sequences:

>Translated_250_residues
MVPPTDPFPDSEPEGTDPPSSGGASAPSSPPSFATVKAGLRAQARRTRKGLADAAGAAGDKAPGAPLSRATPAGAAAFHG
AADLLSRLTTPHETIIAGYWPMAGELDPRPLMAALHAHGCRLALPVVVGPASALAFRAWAPGEPVDQGALGTFQPLSLAP
LVTPSWLLVPLLAFDDAGHRLGQGGGFYDRTLAGLGAAGSPVVAIGVAYAAQQVEALPVEPHDRPLDGVITEAGVRWFGE
WPRPDMERKR
>Mature_250_residues
MVPPTDPFPDSEPEGTDPPSSGGASAPSSPPSFATVKAGLRAQARRTRKGLADAAGAAGDKAPGAPLSRATPAGAAAFHG
AADLLSRLTTPHETIIAGYWPMAGELDPRPLMAALHAHGCRLALPVVVGPASALAFRAWAPGEPVDQGALGTFQPLSLAP
LVTPSWLLVPLLAFDDAGHRLGQGGGFYDRTLAGLGAAGSPVVAIGVAYAAQQVEALPVEPHDRPLDGVITEAGVRWFGE
WPRPDMERKR

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=152, Percent_Identity=39.4736842105263, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 25656; Mature: 25656

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPPTDPFPDSEPEGTDPPSSGGASAPSSPPSFATVKAGLRAQARRTRKGLADAAGAAGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAPGAPLSRATPAGAAAFHGAADLLSRLTTPHETIIAGYWPMAGELDPRPLMAALHAHGC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCC
RLALPVVVGPASALAFRAWAPGEPVDQGALGTFQPLSLAPLVTPSWLLVPLLAFDDAGHR
EEEEEEEECCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
LGQGGGFYDRTLAGLGAAGSPVVAIGVAYAAQQVEALPVEPHDRPLDGVITEAGVRWFGE
HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
WPRPDMERKR
CCCCCCCCCC
>Mature Secondary Structure
MVPPTDPFPDSEPEGTDPPSSGGASAPSSPPSFATVKAGLRAQARRTRKGLADAAGAAGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAPGAPLSRATPAGAAAFHGAADLLSRLTTPHETIIAGYWPMAGELDPRPLMAALHAHGC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCC
RLALPVVVGPASALAFRAWAPGEPVDQGALGTFQPLSLAPLVTPSWLLVPLLAFDDAGHR
EEEEEEEECCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
LGQGGGFYDRTLAGLGAAGSPVVAIGVAYAAQQVEALPVEPHDRPLDGVITEAGVRWFGE
HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
WPRPDMERKR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]