| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is eutB [H]
Identifier: 83592368
GI number: 83592368
Start: 1221288
End: 1222679
Strand: Reverse
Name: eutB [H]
Synonym: Rru_A1032
Alternate gene names: 83592368
Gene position: 1222679-1221288 (Counterclockwise)
Preceding gene: 83592369
Following gene: 83592367
Centisome position: 28.09
GC content: 67.1
Gene sequence:
>1392_bases ATGGGATTGTATCGGGCGACGGTGGGGGGAACACGCTACGACTTCGCCGATTTGCGAACGGTGATGGCCTGCGCCTCGCC GCGCCGCTCGGGCGACGAACTGGCCGGACTGGCCGCCGAGAGCGACGCCCAGCGCATGGCGGCCCGCCTCGTTCTCGCCG ATCTGCCCCTGCGCGCCTTCCTTGACACGCCGCTTGTTCCCTATGAGAGCGACGAAGTCACCCGGCTGATCATCGATACC CACGATGGCGCCGCCTTCGCCCCGGTCGCCAGCCTGACCGTTGGCGGCTTTCGCGACTGGCTGCTGTCCTATGCCGCCGA TAGCGCCGCCCTTGCCGCCCTCGCCCCCGGACTGACCCCGGAAATGGTCGCCGCCGTCAGCAAGCTGATGCGCAACGCCG ATCTGATCGCCGTGGCGGCGAAATGCCAGGTGATCACCGGCTTTCGCACGACGCTGGGCTTGCCCGGCCGTCTGGCCAGC CGCCTTCAGCCCAACCACCCCACCGATGATCCCGCCGGTATCGCCGCCTCGACCCTTGACGGTCTGCTGTTTGGCATGGG CGACGCGGTGATCGGCATCAATCCGGCGACCGATAACGTCGGCGCCTGCGTCACCTTGCTTGAGATGCTGGACGCCGTGC GCCAGCGCTTCGACATCCCCAGCCAATCTTGCGTGCTGACCCATGTCACCAACAGCATCGAGGCGATCAACCGCGGCGCC CCCCTCGACCTTGTCTTCCAGTCGGTCGCCGGCACCGAGGCGGCCAATGCCGGCTTTGGCATCAGCTTGTCGCTGCTGGG CGAAGCCCGCGAGGCGGCCTTGTCGCTGCGGCGCGGCACGGTGGGCGACAACGTCATGTATTTCGAGACCGGCCAGGGCG CGGCGCTGTCGGCCGACGCCCACCACGGCGTCGATCAGCAAACCGTCGAGGTCCGCGCCTATGCGGTCTGCCGGGCCTTC AAGCCGCTGATCGTCAATACGGTCGTCGGCTTTATCGGCCCGGAATATCTGTATGATTCCAAGCAGATCATCCGCGCCGG CCTGGAAGATCACTGCTGCGGCAAGCTGCTTGGCCTGCCGATGGGGGTGGATGTCTGCTACACCAACCACGCCGAGGCCG ATCAGGACGATATGGATACCCTGATGACCCTGCTTGGCGTCGCCGGGGTCACCTTCCTGATCGGCGTGCCCGGCGCCGAT GACGTGATGCTCAATTATCAGAGCCTGTCCTATCACGACATCCTTGGCCTGCGTCATCTGCTTGACCGCCGCCCCGCCCC CGAATTCGCCGACTGGCTCGCGCGCATGGGCATGAGCGACGCCGGCGGACGCCTGCCGCCGCTCGATGCCAGCGCCCCGG CCCTGCGTCGCCTTCTGGCTTCGGGAGGCTGA
Upstream 100 bases:
>100_bases ATGTCAAGTCGCTCTGGTCCGACCCGGACCAGAATAAGCGCGGTCGCACCGTCTGGCCCCAGGCTTGGGACGGTCCGCCA AGGCAGGGGGGACGGGAACG
Downstream 100 bases:
>100_bases GACGGCCATGACCCTTCCCCCCGTCGTCGATCCCTTCGCCCGCTTCCGCGCCGCCACCCGCGCCCGGGTCGGCCTGGGGC GCAGCGGTGACGCCCTGCCG
Product: ethanolamine ammonia-lyase heavy chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MGLYRATVGGTRYDFADLRTVMACASPRRSGDELAGLAAESDAQRMAARLVLADLPLRAFLDTPLVPYESDEVTRLIIDT HDGAAFAPVASLTVGGFRDWLLSYAADSAALAALAPGLTPEMVAAVSKLMRNADLIAVAAKCQVITGFRTTLGLPGRLAS RLQPNHPTDDPAGIAASTLDGLLFGMGDAVIGINPATDNVGACVTLLEMLDAVRQRFDIPSQSCVLTHVTNSIEAINRGA PLDLVFQSVAGTEAANAGFGISLSLLGEAREAALSLRRGTVGDNVMYFETGQGAALSADAHHGVDQQTVEVRAYAVCRAF KPLIVNTVVGFIGPEYLYDSKQIIRAGLEDHCCGKLLGLPMGVDVCYTNHAEADQDDMDTLMTLLGVAGVTFLIGVPGAD DVMLNYQSLSYHDILGLRHLLDRRPAPEFADWLARMGMSDAGGRLPPLDASAPALRRLLASGG
Sequences:
>Translated_463_residues MGLYRATVGGTRYDFADLRTVMACASPRRSGDELAGLAAESDAQRMAARLVLADLPLRAFLDTPLVPYESDEVTRLIIDT HDGAAFAPVASLTVGGFRDWLLSYAADSAALAALAPGLTPEMVAAVSKLMRNADLIAVAAKCQVITGFRTTLGLPGRLAS RLQPNHPTDDPAGIAASTLDGLLFGMGDAVIGINPATDNVGACVTLLEMLDAVRQRFDIPSQSCVLTHVTNSIEAINRGA PLDLVFQSVAGTEAANAGFGISLSLLGEAREAALSLRRGTVGDNVMYFETGQGAALSADAHHGVDQQTVEVRAYAVCRAF KPLIVNTVVGFIGPEYLYDSKQIIRAGLEDHCCGKLLGLPMGVDVCYTNHAEADQDDMDTLMTLLGVAGVTFLIGVPGAD DVMLNYQSLSYHDILGLRHLLDRRPAPEFADWLARMGMSDAGGRLPPLDASAPALRRLLASGG >Mature_462_residues GLYRATVGGTRYDFADLRTVMACASPRRSGDELAGLAAESDAQRMAARLVLADLPLRAFLDTPLVPYESDEVTRLIIDTH DGAAFAPVASLTVGGFRDWLLSYAADSAALAALAPGLTPEMVAAVSKLMRNADLIAVAAKCQVITGFRTTLGLPGRLASR LQPNHPTDDPAGIAASTLDGLLFGMGDAVIGINPATDNVGACVTLLEMLDAVRQRFDIPSQSCVLTHVTNSIEAINRGAP LDLVFQSVAGTEAANAGFGISLSLLGEAREAALSLRRGTVGDNVMYFETGQGAALSADAHHGVDQQTVEVRAYAVCRAFK PLIVNTVVGFIGPEYLYDSKQIIRAGLEDHCCGKLLGLPMGVDVCYTNHAEADQDDMDTLMTLLGVAGVTFLIGVPGADD VMLNYQSLSYHDILGLRHLLDRRPAPEFADWLARMGMSDAGGRLPPLDASAPALRRLLASGG
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=441, Percent_Identity=49.2063492063492, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 48823; Mature: 48692
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLYRATVGGTRYDFADLRTVMACASPRRSGDELAGLAAESDAQRMAARLVLADLPLRAF CCCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHH LDTPLVPYESDEVTRLIIDTHDGAAFAPVASLTVGGFRDWLLSYAADSAALAALAPGLTP HCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCH EMVAAVSKLMRNADLIAVAAKCQVITGFRTTLGLPGRLASRLQPNHPTDDPAGIAASTLD HHHHHHHHHHHCCCEEEEEEHHEEEECHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHH GLLFGMGDAVIGINPATDNVGACVTLLEMLDAVRQRFDIPSQSCVLTHVTNSIEAINRGA HHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCC PLDLVFQSVAGTEAANAGFGISLSLLGEAREAALSLRRGTVGDNVMYFETGQGAALSADA CHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCC HHGVDQQTVEVRAYAVCRAFKPLIVNTVVGFIGPEYLYDSKQIIRAGLEDHCCGKLLGLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCHHHHHHHHCCC MGVDVCYTNHAEADQDDMDTLMTLLGVAGVTFLIGVPGADDVMLNYQSLSYHDILGLRHL CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHH LDRRPAPEFADWLARMGMSDAGGRLPPLDASAPALRRLLASGG HHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure GLYRATVGGTRYDFADLRTVMACASPRRSGDELAGLAAESDAQRMAARLVLADLPLRAF CCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHH LDTPLVPYESDEVTRLIIDTHDGAAFAPVASLTVGGFRDWLLSYAADSAALAALAPGLTP HCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCH EMVAAVSKLMRNADLIAVAAKCQVITGFRTTLGLPGRLASRLQPNHPTDDPAGIAASTLD HHHHHHHHHHHCCCEEEEEEHHEEEECHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHH GLLFGMGDAVIGINPATDNVGACVTLLEMLDAVRQRFDIPSQSCVLTHVTNSIEAINRGA HHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCC PLDLVFQSVAGTEAANAGFGISLSLLGEAREAALSLRRGTVGDNVMYFETGQGAALSADA CHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECCCC HHGVDQQTVEVRAYAVCRAFKPLIVNTVVGFIGPEYLYDSKQIIRAGLEDHCCGKLLGLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCHHHHHHHHCCC MGVDVCYTNHAEADQDDMDTLMTLLGVAGVTFLIGVPGADDVMLNYQSLSYHDILGLRHL CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHH LDRRPAPEFADWLARMGMSDAGGRLPPLDASAPALRRLLASGG HHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]