| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is eutC [H]
Identifier: 83592367
GI number: 83592367
Start: 1220465
End: 1221280
Strand: Reverse
Name: eutC [H]
Synonym: Rru_A1031
Alternate gene names: 83592367
Gene position: 1221280-1220465 (Counterclockwise)
Preceding gene: 83592368
Following gene: 83592366
Centisome position: 28.06
GC content: 72.18
Gene sequence:
>816_bases ATGACCCTTCCCCCCGTCGTCGATCCCTTCGCCCGCTTCCGCGCCGCCACCCGCGCCCGGGTCGGCCTGGGGCGCAGCGG TGACGCCCTGCCGACCACCGCCCTGCTCGAGTTCCAGATCGCCCATGCCCGGGCCCGCGACGCCGTTCATGGCGCGATCG ACGCCGAGGCCCTGGCCCGCGCCTTCGCCCCCTTGCCCACAGCAACGGTCCACAGCGCCGCCAGCGACCGCGCCGTTTAT CTGCGCCGCCCCGATCTCGGCCGCAGGCTCGACGACGAGAGCGCCGCCCGCCTTGACGCCCTGGGCGAAGGCGGACAGGG CTGGGATGTGGTGTTCGTGATCGCCGATGGCCTGTCGGCCGCCGCCGTCGCCGCCCATGCCCAAGCCACCGTGCGCGCCG CCCTTGAAACCCTGGGCGGCCGGCTTTCGGTCGGCCCGCTGGTCATCGCCAGCCAGTCGCGGGTGGCGCTGGGCGATGAC ATCGGCGCCCGGTTGAAGGCGCGCATGGTCGCCGTGCTGATCGGCGAGCGCCCGGGTTTGTCGGTCGCCGATTCGCTGGG CGCCTACATCACCTTCGATCCCCGCCCCGGTCGGCGGGATTCGGAGCGCAACTGCATTTCCAACATTCACGCCGACGGCC TCCACGCCGATCAGGCCGCCCGCACCCTGTGCTGGCTGGTCGAGGAAGGCCTGCGCCGCCGGATCACCGGCATCGGGCTC AAGGAAGAGGCTCAGCCCCGCCTCGGGGCCGGTGAGGGGGGAAACCTACCGCCTGTCCTCGACCCGTCCGACCGCTTAGG AGAGTTATCGTCATGA
Upstream 100 bases:
>100_bases GCGCGCATGGGCATGAGCGACGCCGGCGGACGCCTGCCGCCGCTCGATGCCAGCGCCCCGGCCCTGCGTCGCCTTCTGGC TTCGGGAGGCTGAGACGGCC
Downstream 100 bases:
>100_bases CCTTGTCGATCAAACCCACGCTCAAGAAAAGCCTGAGCGGGCTCCACCTGTGGGGCATCGCCGTCGGGCTGGTGATTTCA GGGGAATACTTCGGCTGGAG
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTLPPVVDPFARFRAATRARVGLGRSGDALPTTALLEFQIAHARARDAVHGAIDAEALARAFAPLPTATVHSAASDRAVY LRRPDLGRRLDDESAARLDALGEGGQGWDVVFVIADGLSAAAVAAHAQATVRAALETLGGRLSVGPLVIASQSRVALGDD IGARLKARMVAVLIGERPGLSVADSLGAYITFDPRPGRRDSERNCISNIHADGLHADQAARTLCWLVEEGLRRRITGIGL KEEAQPRLGAGEGGNLPPVLDPSDRLGELSS
Sequences:
>Translated_271_residues MTLPPVVDPFARFRAATRARVGLGRSGDALPTTALLEFQIAHARARDAVHGAIDAEALARAFAPLPTATVHSAASDRAVY LRRPDLGRRLDDESAARLDALGEGGQGWDVVFVIADGLSAAAVAAHAQATVRAALETLGGRLSVGPLVIASQSRVALGDD IGARLKARMVAVLIGERPGLSVADSLGAYITFDPRPGRRDSERNCISNIHADGLHADQAARTLCWLVEEGLRRRITGIGL KEEAQPRLGAGEGGNLPPVLDPSDRLGELSS >Mature_270_residues TLPPVVDPFARFRAATRARVGLGRSGDALPTTALLEFQIAHARARDAVHGAIDAEALARAFAPLPTATVHSAASDRAVYL RRPDLGRRLDDESAARLDALGEGGQGWDVVFVIADGLSAAAVAAHAQATVRAALETLGGRLSVGPLVIASQSRVALGDDI GARLKARMVAVLIGERPGLSVADSLGAYITFDPRPGRRDSERNCISNIHADGLHADQAARTLCWLVEEGLRRRITGIGLK EEAQPRLGAGEGGNLPPVLDPSDRLGELSS
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=237, Percent_Identity=36.2869198312236, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 28417; Mature: 28285
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPPVVDPFARFRAATRARVGLGRSGDALPTTALLEFQIAHARARDAVHGAIDAEALAR CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AFAPLPTATVHSAASDRAVYLRRPDLGRRLDDESAARLDALGEGGQGWDVVFVIADGLSA HHCCCCCHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCH AAVAAHAQATVRAALETLGGRLSVGPLVIASQSRVALGDDIGARLKARMVAVLIGERPGL HHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCEECCCCHHHHHHHHHHHHEECCCCCC SVADSLGAYITFDPRPGRRDSERNCISNIHADGLHADQAARTLCWLVEEGLRRRITGIGL CHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC KEEAQPRLGAGEGGNLPPVLDPSDRLGELSS CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure TLPPVVDPFARFRAATRARVGLGRSGDALPTTALLEFQIAHARARDAVHGAIDAEALAR CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AFAPLPTATVHSAASDRAVYLRRPDLGRRLDDESAARLDALGEGGQGWDVVFVIADGLSA HHCCCCCHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCH AAVAAHAQATVRAALETLGGRLSVGPLVIASQSRVALGDDIGARLKARMVAVLIGERPGL HHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCEECCCCHHHHHHHHHHHHEECCCCCC SVADSLGAYITFDPRPGRRDSERNCISNIHADGLHADQAARTLCWLVEEGLRRRITGIGL CHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC KEEAQPRLGAGEGGNLPPVLDPSDRLGELSS CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA