| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yufN [H]
Identifier: 83592325
GI number: 83592325
Start: 1175483
End: 1176532
Strand: Reverse
Name: yufN [H]
Synonym: Rru_A0989
Alternate gene names: 83592325
Gene position: 1176532-1175483 (Counterclockwise)
Preceding gene: 83592326
Following gene: 83592324
Centisome position: 27.03
GC content: 69.62
Gene sequence:
>1050_bases ATGATCGACCGCCGTCGCTTGATGACCGGCCTTGCCGGCCTGCCGCTTGTCGCCGCCTTGGCCGCGCTCGGAGGCCGGGC GCAAGCGGGCGACGAGGAAGCGGCGCCCGCCTCGGCCGAAGGCGGCGCACACAAGGCCGGCCCTCCCCGTATCGCCGTGG TCTATTCCTCTTCGGTGGCCGGCAAGCTTGACAAAAGCTTCAACCAATCCGCTTCCGAGGGCGTCGAGGCGGCGCGTGGG GTTCTCGAGGCGACCATCCGCGAGTACCTGCCGACGGAGCCCCAGGAAGAACCCGAGATGATCGAGCGCGCCGCCGGCGA AGCCGATCTGGTCATCACCATCGGCTATGGCCTGCACGGCTTCGCCCTCGCCAGCGCGCCGCGCCACCCGGCGGCGCGCT TCACCGTGATCGATGCCGAGGTCGACCGCCCGGCCTTCCAGTCGGTCACCTTTCGCGAACAAGAGGGGGCGTTTCTGGCC GGACTCCTGGCCGCCGGGGTCAGCCGCACCGGACGGCTGGGGTTCTTGGGCGGCATGCCGACGCCGGGGATCGAGCGCTT CCGCAAAGGATACACCGCCGGCGCGCGCCATGGCGGCGCCGGCGGCACGATCGTTTTGGAAAAGATGATCGGGACCACCC AGGCCGGCTTCCAAAACCCCTTCGCCGGCATGCTCGAAGCCGAAGCGCTGATCGCGGCGGGGGCCGATGTGATCTTCGCC GCCGCCGGACGCTCGGGCCTGGGGGCCTATCAGGCGGCCTGTGACAGCGGCGTTCTGGCCATCGGCGTCGACAGCAATCA GAATTACCTGTTCCCCGGCACGATGTTGACCAGCGTCATCAAGCGGGTCGACACCGCGGTGCTTCAGGCCGCCGCCTCCT TCGCCTCGGGGCAATGGCTGCCCGGTCCGCTCTCGCTCGGCCTGCGCGAGGAGGGCATGGGATTGGCCCTGGACCATCAC AATCGCCCGCTGATCCCCACCGACCTCTGGCAACGGGTCGATGCGGCGCGCGAGGCCATCGTCACCGGCCGGCTGGTGGT GGAAACCTGA
Upstream 100 bases:
>100_bases GTGATTTCGGCCAGGGTTACTATTTCGCCAAGCCGCTCGAGGCCCAAGATTTCGCCAAGGTGCTGCGTGACCAGCCCTGG CTGACCGGGGATGCCGCCCA
Downstream 100 bases:
>100_bases CGGTAAGGCACCTTCCAATACCGCAACCCTTTTCCCGATCGCGCGTTCTTTCGCCGTCCGCCCTCACGGCGGATAGCGAT AGATCCCCGGCGTCGCAGAC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIDRRRLMTGLAGLPLVAALAALGGRAQAGDEEAAPASAEGGAHKAGPPRIAVVYSSSVAGKLDKSFNQSASEGVEAARG VLEATIREYLPTEPQEEPEMIERAAGEADLVITIGYGLHGFALASAPRHPAARFTVIDAEVDRPAFQSVTFREQEGAFLA GLLAAGVSRTGRLGFLGGMPTPGIERFRKGYTAGARHGGAGGTIVLEKMIGTTQAGFQNPFAGMLEAEALIAAGADVIFA AAGRSGLGAYQAACDSGVLAIGVDSNQNYLFPGTMLTSVIKRVDTAVLQAAASFASGQWLPGPLSLGLREEGMGLALDHH NRPLIPTDLWQRVDAAREAIVTGRLVVET
Sequences:
>Translated_349_residues MIDRRRLMTGLAGLPLVAALAALGGRAQAGDEEAAPASAEGGAHKAGPPRIAVVYSSSVAGKLDKSFNQSASEGVEAARG VLEATIREYLPTEPQEEPEMIERAAGEADLVITIGYGLHGFALASAPRHPAARFTVIDAEVDRPAFQSVTFREQEGAFLA GLLAAGVSRTGRLGFLGGMPTPGIERFRKGYTAGARHGGAGGTIVLEKMIGTTQAGFQNPFAGMLEAEALIAAGADVIFA AAGRSGLGAYQAACDSGVLAIGVDSNQNYLFPGTMLTSVIKRVDTAVLQAAASFASGQWLPGPLSLGLREEGMGLALDHH NRPLIPTDLWQRVDAAREAIVTGRLVVET >Mature_349_residues MIDRRRLMTGLAGLPLVAALAALGGRAQAGDEEAAPASAEGGAHKAGPPRIAVVYSSSVAGKLDKSFNQSASEGVEAARG VLEATIREYLPTEPQEEPEMIERAAGEADLVITIGYGLHGFALASAPRHPAARFTVIDAEVDRPAFQSVTFREQEGAFLA GLLAAGVSRTGRLGFLGGMPTPGIERFRKGYTAGARHGGAGGTIVLEKMIGTTQAGFQNPFAGMLEAEALIAAGADVIFA AAGRSGLGAYQAACDSGVLAIGVDSNQNYLFPGTMLTSVIKRVDTAVLQAAASFASGQWLPGPLSLGLREEGMGLALDHH NRPLIPTDLWQRVDAAREAIVTGRLVVET
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 36127; Mature: 36127
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRRRLMTGLAGLPLVAALAALGGRAQAGDEEAAPASAEGGAHKAGPPRIAVVYSSSVA CCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH GKLDKSFNQSASEGVEAARGVLEATIREYLPTEPQEEPEMIERAAGEADLVITIGYGLHG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCCCH FALASAPRHPAARFTVIDAEVDRPAFQSVTFREQEGAFLAGLLAAGVSRTGRLGFLGGMP HHHCCCCCCCCCEEEEEECCCCCCHHHCCCEECCCCHHHHHHHHHHCCCCCCEEEECCCC TPGIERFRKGYTAGARHGGAGGTIVLEKMIGTTQAGFQNPFAGMLEAEALIAAGADVIFA CHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCEEEE AAGRSGLGAYQAACDSGVLAIGVDSNQNYLFPGTMLTSVIKRVDTAVLQAAASFASGQWL ECCCCCCHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC PGPLSLGLREEGMGLALDHHNRPLIPTDLWQRVDAAREAIVTGRLVVET CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEEC >Mature Secondary Structure MIDRRRLMTGLAGLPLVAALAALGGRAQAGDEEAAPASAEGGAHKAGPPRIAVVYSSSVA CCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH GKLDKSFNQSASEGVEAARGVLEATIREYLPTEPQEEPEMIERAAGEADLVITIGYGLHG HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCCCH FALASAPRHPAARFTVIDAEVDRPAFQSVTFREQEGAFLAGLLAAGVSRTGRLGFLGGMP HHHCCCCCCCCCEEEEEECCCCCCHHHCCCEECCCCHHHHHHHHHHCCCCCCEEEECCCC TPGIERFRKGYTAGARHGGAGGTIVLEKMIGTTQAGFQNPFAGMLEAEALIAAGADVIFA CHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCEEEE AAGRSGLGAYQAACDSGVLAIGVDSNQNYLFPGTMLTSVIKRVDTAVLQAAASFASGQWL ECCCCCCHHHHHHCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC PGPLSLGLREEGMGLALDHHNRPLIPTDLWQRVDAAREAIVTGRLVVET CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]