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The map label for this gene is yfnD [H]

Identifier: 83592270

GI number: 83592270

Start: 1112304

End: 1114025

Strand: Direct

Name: yfnD [H]

Synonym: Rru_A0934

Alternate gene names: 83592270

Gene position: 1112304-1114025 (Clockwise)

Preceding gene: 83592269

Following gene: 83592271

Centisome position: 25.55

GC content: 60.63

Gene sequence:

>1722_bases
ATGACCGGACGCCATTACTGTACCTATTTCGACCACCGTTATTTGCCCCGTGGCCTTGTGCTGATGGATAGCATCCACAA
ATTCGATCCCGAGGCGATTTTTCATATTTTGGCCTTCGATGACACCTGCGCCGACACGCTTGAGCAAATGGGCGACGAGC
ATATCGATGTGACGACGTTAAAAGATCTGGAGGCTTTTGATCCTGATCTTTATGCGGTAAAGCCCACGCGGTCATTGATC
GAGTATTATTTCACGTCGACCCCTTGTTTCCCGCGCTATGTTTTAAATAAATTTCCAGACTTGGATATGATTACCTATAT
CGACAGCGATACTTTCTTCTATTCCGATCCTGAAATCATTTTCGACGATATCGGCCCGGCCTCGGTGGCGATCACGCCGC
ATCGGTTTTCCCCGGAACGGGAAAATCTGGCGGTCTATGGGCGCTTCAATGTCGGCTGGATCACTTGGCGCAATGATGAC
GAGGGCAGGCGTTGCCTGGAGGATTACCGGCGCGACTGCCTGGAGTGGTGCTATGACCGGCTCGAACCCAGCCGCTTCGC
CGATCAGAAGTATCTCGACAAATGGCCCGCCCTCTATCCCAGCCTGAAAAGCCTGGAGAACCCCGGGGTCAATGCCGCCT
CGTGGAATATCAACGGCTGCGTGCTCTCCGAGGTCGACGGCCTTTTGTTCCTCAATGATCGGCGGCTGGTGTTCTGGCAT
TACCACGGCCTGAAGGAAGGGCCGGACGGCGCCTGGACCCACGCGCTTGATGCCGAGCAACTGGCCCGCCATCCGGCGCT
GATCGACAGGATCTACCGCCCCTATATCAAGCGCCTGCGGCTGGCCGATCAGCTGCTGAAAGTGCGCTACGGTCTGGAAC
GCGAGGTCAAAAGTCATATCCGCTATGGCGCCGACCGCCCTTCGGCGATGGCTGGCAGCGAGGGGACGGCCCCGGCCGCC
CCGCCTTTCCAGGGCTGGCGCACAGTGTCGGCGGGCTGGCCGACCACGCCCCCGGCGGGCTGGATGAACCCGGGCATCGT
CGAGGTGCGTCGCGACCAGTGGCAGGCTTTGATCCGCACCCCGGCCATCGACAGCGCCGGCGCCAGTCCGGCCGAGCAGC
TGAACACCCTGGTCGTTCTCGATGCCTTTGACGAGGCCTTGCGTCGGCGCGGCGCCGACAAGCCCTTGAGGATCCTCGAT
TGGGGCGGCGATGTCGGCATGATGCGCCAGCGCCTGAGCCAACTGCGCCCGCAGGTCGAGATGCTCTATACGGTCAAGGA
AATGCCCCTGCTTTGTGAGCTTGGCCGCGCCTTGAACCCCGCCGTGCGCTTTGTCGACGACGACCAACAGGCCCTGGCGG
AGGGGTATGATTTGGTGATCGCCAGCGCGTCGATGCATTACGACGAGGCTTGGCAAAAAACATTGGCGGGCTTGAGCGCG
GCGACCGAGGGGGTCTTGCTGATCGCCCGTCAGCCGACCCTGAGCACCGAGGCCAGCTTCGTCGCCGAGCAGGGCGCCTA
TGACTCGGTATTCACCTGCTGGATTTTGAATGAGGCCGATCTTCTTGGGCAGTTCGACGCCTGCGGTCTGGTGGTCGCCC
GGCGTCTGTTCTCCGGCGATGGGGCGGGGATCGATCAGGCGGCCGAGCAACCCGTCTTCCGCAGCTATCTTTTACGCAAG
CGCTCATCACGAAAGGACGAGGGCGATGACGGCGAGGTTTAG

Upstream 100 bases:

>100_bases
GAGCTTGCCGATGTATCCCCACCTGCCGCCCGACGACGCGGCGCGGGTGACGGATCTGGTGAAAGCCTTCTTTTCGCGCT
CTCCTTAGGGTGATCCCCCC

Downstream 100 bases:

>100_bases
CGATCTGTCGGGACGAAACGCCCTCATCATTGGCGGCCTGGGCTTCATCGGCTCCAATCTGGCGCGGCGTCTGGTTGATC
TGGGGGCTTATGTCACCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTGRHYCTYFDHRYLPRGLVLMDSIHKFDPEAIFHILAFDDTCADTLEQMGDEHIDVTTLKDLEAFDPDLYAVKPTRSLI
EYYFTSTPCFPRYVLNKFPDLDMITYIDSDTFFYSDPEIIFDDIGPASVAITPHRFSPERENLAVYGRFNVGWITWRNDD
EGRRCLEDYRRDCLEWCYDRLEPSRFADQKYLDKWPALYPSLKSLENPGVNAASWNINGCVLSEVDGLLFLNDRRLVFWH
YHGLKEGPDGAWTHALDAEQLARHPALIDRIYRPYIKRLRLADQLLKVRYGLEREVKSHIRYGADRPSAMAGSEGTAPAA
PPFQGWRTVSAGWPTTPPAGWMNPGIVEVRRDQWQALIRTPAIDSAGASPAEQLNTLVVLDAFDEALRRRGADKPLRILD
WGGDVGMMRQRLSQLRPQVEMLYTVKEMPLLCELGRALNPAVRFVDDDQQALAEGYDLVIASASMHYDEAWQKTLAGLSA
ATEGVLLIARQPTLSTEASFVAEQGAYDSVFTCWILNEADLLGQFDACGLVVARRLFSGDGAGIDQAAEQPVFRSYLLRK
RSSRKDEGDDGEV

Sequences:

>Translated_573_residues
MTGRHYCTYFDHRYLPRGLVLMDSIHKFDPEAIFHILAFDDTCADTLEQMGDEHIDVTTLKDLEAFDPDLYAVKPTRSLI
EYYFTSTPCFPRYVLNKFPDLDMITYIDSDTFFYSDPEIIFDDIGPASVAITPHRFSPERENLAVYGRFNVGWITWRNDD
EGRRCLEDYRRDCLEWCYDRLEPSRFADQKYLDKWPALYPSLKSLENPGVNAASWNINGCVLSEVDGLLFLNDRRLVFWH
YHGLKEGPDGAWTHALDAEQLARHPALIDRIYRPYIKRLRLADQLLKVRYGLEREVKSHIRYGADRPSAMAGSEGTAPAA
PPFQGWRTVSAGWPTTPPAGWMNPGIVEVRRDQWQALIRTPAIDSAGASPAEQLNTLVVLDAFDEALRRRGADKPLRILD
WGGDVGMMRQRLSQLRPQVEMLYTVKEMPLLCELGRALNPAVRFVDDDQQALAEGYDLVIASASMHYDEAWQKTLAGLSA
ATEGVLLIARQPTLSTEASFVAEQGAYDSVFTCWILNEADLLGQFDACGLVVARRLFSGDGAGIDQAAEQPVFRSYLLRK
RSSRKDEGDDGEV
>Mature_572_residues
TGRHYCTYFDHRYLPRGLVLMDSIHKFDPEAIFHILAFDDTCADTLEQMGDEHIDVTTLKDLEAFDPDLYAVKPTRSLIE
YYFTSTPCFPRYVLNKFPDLDMITYIDSDTFFYSDPEIIFDDIGPASVAITPHRFSPERENLAVYGRFNVGWITWRNDDE
GRRCLEDYRRDCLEWCYDRLEPSRFADQKYLDKWPALYPSLKSLENPGVNAASWNINGCVLSEVDGLLFLNDRRLVFWHY
HGLKEGPDGAWTHALDAEQLARHPALIDRIYRPYIKRLRLADQLLKVRYGLEREVKSHIRYGADRPSAMAGSEGTAPAAP
PFQGWRTVSAGWPTTPPAGWMNPGIVEVRRDQWQALIRTPAIDSAGASPAEQLNTLVVLDAFDEALRRRGADKPLRILDW
GGDVGMMRQRLSQLRPQVEMLYTVKEMPLLCELGRALNPAVRFVDDDQQALAEGYDLVIASASMHYDEAWQKTLAGLSAA
TEGVLLIARQPTLSTEASFVAEQGAYDSVFTCWILNEADLLGQFDACGLVVARRLFSGDGAGIDQAAEQPVFRSYLLRKR
SSRKDEGDDGEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 64989; Mature: 64858

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRHYCTYFDHRYLPRGLVLMDSIHKFDPEAIFHILAFDDTCADTLEQMGDEHIDVTTL
CCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHCCCCCEEEEEE
KDLEAFDPDLYAVKPTRSLIEYYFTSTPCFPRYVLNKFPDLDMITYIDSDTFFYSDPEII
HHHHHCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCEEECCCCEE
FDDIGPASVAITPHRFSPERENLAVYGRFNVGWITWRNDDEGRRCLEDYRRDCLEWCYDR
EECCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LEPSRFADQKYLDKWPALYPSLKSLENPGVNAASWNINGCVLSEVDGLLFLNDRRLVFWH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCEEEECCCEEEEEE
YHGLKEGPDGAWTHALDAEQLARHPALIDRIYRPYIKRLRLADQLLKVRYGLEREVKSHI
ECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RYGADRPSAMAGSEGTAPAAPPFQGWRTVSAGWPTTPPAGWMNPGIVEVRRDQWQALIRT
HCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHC
PAIDSAGASPAEQLNTLVVLDAFDEALRRRGADKPLRILDWGGDVGMMRQRLSQLRPQVE
CCCCCCCCCCHHHCCEEEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHH
MLYTVKEMPLLCELGRALNPAVRFVDDDQQALAEGYDLVIASASMHYDEAWQKTLAGLSA
HHHHHHHCHHHHHHHHHCCCHHEEECCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
ATEGVLLIARQPTLSTEASFVAEQGAYDSVFTCWILNEADLLGQFDACGLVVARRLFSGD
CCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHCCC
GAGIDQAAEQPVFRSYLLRKRSSRKDEGDDGEV
CCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TGRHYCTYFDHRYLPRGLVLMDSIHKFDPEAIFHILAFDDTCADTLEQMGDEHIDVTTL
CCCEEEEECCCCCCCCCHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHCCCCCEEEEEE
KDLEAFDPDLYAVKPTRSLIEYYFTSTPCFPRYVLNKFPDLDMITYIDSDTFFYSDPEII
HHHHHCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCEEECCCCEE
FDDIGPASVAITPHRFSPERENLAVYGRFNVGWITWRNDDEGRRCLEDYRRDCLEWCYDR
EECCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LEPSRFADQKYLDKWPALYPSLKSLENPGVNAASWNINGCVLSEVDGLLFLNDRRLVFWH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCEEEECCCEEEEEE
YHGLKEGPDGAWTHALDAEQLARHPALIDRIYRPYIKRLRLADQLLKVRYGLEREVKSHI
ECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RYGADRPSAMAGSEGTAPAAPPFQGWRTVSAGWPTTPPAGWMNPGIVEVRRDQWQALIRT
HCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHC
PAIDSAGASPAEQLNTLVVLDAFDEALRRRGADKPLRILDWGGDVGMMRQRLSQLRPQVE
CCCCCCCCCCHHHCCEEEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHH
MLYTVKEMPLLCELGRALNPAVRFVDDDQQALAEGYDLVIASASMHYDEAWQKTLAGLSA
HHHHHHHCHHHHHHHHHCCCHHEEECCHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
ATEGVLLIARQPTLSTEASFVAEQGAYDSVFTCWILNEADLLGQFDACGLVVARRLFSGD
CCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHCCC
GAGIDQAAEQPVFRSYLLRKRSSRKDEGDDGEV
CCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]