| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is terA [H]
Identifier: 83592228
GI number: 83592228
Start: 1068315
End: 1069571
Strand: Reverse
Name: terA [H]
Synonym: Rru_A0892
Alternate gene names: 83592228
Gene position: 1069571-1068315 (Counterclockwise)
Preceding gene: 83592229
Following gene: 83592227
Centisome position: 24.57
GC content: 65.16
Gene sequence:
>1257_bases ATGACCGTCGTCACATTGACTCCGGGGGCGAATACCACCATCGCCGACTGCGCTCAGATCATGGTCGCCGTCGGCTGGGA TCCCAAATCACCGCCCGGCATGGAAATCGACGCCTCGGCCTTCATCATCAAGGCCGATGGCAAGGTGGTGAACGACGAAC ACTTCGTGTTCTATGGCGCCCAGGCCTCGCCCGATGGCTCGGTGCGCTTCGTCGCCTCGCCGATGGCCGGCAATCCGGGC GATGTCCAGGCTTTCGGCATCGATCTCGCCAAGCTTGCCGGCACAATCGACGCCATCGACATCTGCGTCACCATCCACGA GGGGCAGGCGCGGCGCCAAAGCTTCGCCAGCCTGAAGGGGGTTTTCGCCCGCATCCTGGATCTGGCGACCAACCGGGAAA TCGCCCGCTTCGATCTCCAAACCGCCGGAATGGCCGAAACCGCCATCACCCTTGGCAAGGTCTATCGGCGCAACGACCAG TGGAAGGTCCGCGCCGTGGGTCAGGGCTTCGCCGGTGGTCTGGCGCCGCTCGCCCGTCAATACGGCGTCGATGTCGCCGA GGATCCGCCCGCCCCCGCCCCAAGCAAGCCGGCCGCTCCCCCTCCGCCGCCCCCTCCTCCGGCGGCCAAGCCGATCAGCC TGTCGAAGGTGACGCTGGAAAAGCGCGGGCAATCGATCTCGCTGGAAAAAAAGGCCGATGCCGGGTTCGGCGAGATCATC TTCAATCTGAACTGGAACCAGCGCCCCCCGCAAAAAAGCGGCGGGTTCTTCGGCGGATTGTTGGGCGCCAACAAGGCGAC CGACCTTGACCTCGGCTGCTTGTGGGAGATGGAGGGCAGCGGCCAGAAGGGGGTGATCCAGGCCCTGGGCGAAGCCTGGG GCGATTACGCCCGCGAACCGTTCATCCGCCATGCCGGCGACGACCGCACCGGCGCCATGGCCCAGGGCGAGAACATCAAG ATCAACGGCGACCGGCTGTCGCAGATCAAACGCATCCTGGTCTTCGCCTTCATCTATGACGGCGCCCCCAACTGGGCGGC GGCCGATGGCGTGGCGACCGTGAAGATCCCCGGCCAGCCCGACATTGAGGTGCGGCTCGACAACCCGGCCTCCGGCCAGG GGATGTGCGCCATCGCCCTGATCGAAAAGGACGGGGGCAAGTTGAAGGTGACCAAGGAAGAGCGCTATTTCCGCGGTCAC AAGGACATGGACGAAACCTATCGCTGGGGCCTCCGCTGGGTCTCCGGCTCGAAATAG
Upstream 100 bases:
>100_bases CGGCAAGACCTTCCACGACATGATGCCGGCGATTCAGGGCACGCTTTAAGCGGCCATCGAACCGGGACGCGCTTCAGGCG TCCAGCGAAAAGGGGGACGG
Downstream 100 bases:
>100_bases CGCCCCATTCAAAATAGCTAAGGGAACAAAAAATGGCTTTCACCGACTGGCTGAAGAAAAACGTCACGGATGCCAGAGAC ACGATCAACACCGAGATCAC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTVVTLTPGANTTIADCAQIMVAVGWDPKSPPGMEIDASAFIIKADGKVVNDEHFVFYGAQASPDGSVRFVASPMAGNPG DVQAFGIDLAKLAGTIDAIDICVTIHEGQARRQSFASLKGVFARILDLATNREIARFDLQTAGMAETAITLGKVYRRNDQ WKVRAVGQGFAGGLAPLARQYGVDVAEDPPAPAPSKPAAPPPPPPPPAAKPISLSKVTLEKRGQSISLEKKADAGFGEII FNLNWNQRPPQKSGGFFGGLLGANKATDLDLGCLWEMEGSGQKGVIQALGEAWGDYAREPFIRHAGDDRTGAMAQGENIK INGDRLSQIKRILVFAFIYDGAPNWAAADGVATVKIPGQPDIEVRLDNPASGQGMCAIALIEKDGGKLKVTKEERYFRGH KDMDETYRWGLRWVSGSK
Sequences:
>Translated_418_residues MTVVTLTPGANTTIADCAQIMVAVGWDPKSPPGMEIDASAFIIKADGKVVNDEHFVFYGAQASPDGSVRFVASPMAGNPG DVQAFGIDLAKLAGTIDAIDICVTIHEGQARRQSFASLKGVFARILDLATNREIARFDLQTAGMAETAITLGKVYRRNDQ WKVRAVGQGFAGGLAPLARQYGVDVAEDPPAPAPSKPAAPPPPPPPPAAKPISLSKVTLEKRGQSISLEKKADAGFGEII FNLNWNQRPPQKSGGFFGGLLGANKATDLDLGCLWEMEGSGQKGVIQALGEAWGDYAREPFIRHAGDDRTGAMAQGENIK INGDRLSQIKRILVFAFIYDGAPNWAAADGVATVKIPGQPDIEVRLDNPASGQGMCAIALIEKDGGKLKVTKEERYFRGH KDMDETYRWGLRWVSGSK >Mature_417_residues TVVTLTPGANTTIADCAQIMVAVGWDPKSPPGMEIDASAFIIKADGKVVNDEHFVFYGAQASPDGSVRFVASPMAGNPGD VQAFGIDLAKLAGTIDAIDICVTIHEGQARRQSFASLKGVFARILDLATNREIARFDLQTAGMAETAITLGKVYRRNDQW KVRAVGQGFAGGLAPLARQYGVDVAEDPPAPAPSKPAAPPPPPPPPAAKPISLSKVTLEKRGQSISLEKKADAGFGEIIF NLNWNQRPPQKSGGFFGGLLGANKATDLDLGCLWEMEGSGQKGVIQALGEAWGDYAREPFIRHAGDDRTGAMAQGENIKI NGDRLSQIKRILVFAFIYDGAPNWAAADGVATVKIPGQPDIEVRLDNPASGQGMCAIALIEKDGGKLKVTKEERYFRGHK DMDETYRWGLRWVSGSK
Specific function: Not yet known [H]
COG id: COG4110
COG function: function code R; Uncharacterized protein involved in stress response
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017115 - InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 44655; Mature: 44524
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVTLTPGANTTIADCAQIMVAVGWDPKSPPGMEIDASAFIIKADGKVVNDEHFVFYGA CEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCEEECCEEEEEECCEEECCCEEEEEEC QASPDGSVRFVASPMAGNPGDVQAFGIDLAKLAGTIDAIDICVTIHEGQARRQSFASLKG CCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHH VFARILDLATNREIARFDLQTAGMAETAITLGKVYRRNDQWKVRAVGQGFAGGLAPLARQ HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH YGVDVAEDPPAPAPSKPAAPPPPPPPPAAKPISLSKVTLEKRGQSISLEKKADAGFGEII HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCEEEE FNLNWNQRPPQKSGGFFGGLLGANKATDLDLGCLWEMEGSGQKGVIQALGEAWGDYAREP EEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC FIRHAGDDRTGAMAQGENIKINGDRLSQIKRILVFAFIYDGAPNWAAADGVATVKIPGQP HHHCCCCCCCCCEECCCEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCC DIEVRLDNPASGQGMCAIALIEKDGGKLKVTKEERYFRGHKDMDETYRWGLRWVSGSK CEEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHCCCCCHHHHHHHCEEEECCCC >Mature Secondary Structure TVVTLTPGANTTIADCAQIMVAVGWDPKSPPGMEIDASAFIIKADGKVVNDEHFVFYGA EEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCEEECCEEEEEECCEEECCCEEEEEEC QASPDGSVRFVASPMAGNPGDVQAFGIDLAKLAGTIDAIDICVTIHEGQARRQSFASLKG CCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHH VFARILDLATNREIARFDLQTAGMAETAITLGKVYRRNDQWKVRAVGQGFAGGLAPLARQ HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH YGVDVAEDPPAPAPSKPAAPPPPPPPPAAKPISLSKVTLEKRGQSISLEKKADAGFGEII HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCEEEE FNLNWNQRPPQKSGGFFGGLLGANKATDLDLGCLWEMEGSGQKGVIQALGEAWGDYAREP EEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC FIRHAGDDRTGAMAQGENIKINGDRLSQIKRILVFAFIYDGAPNWAAADGVATVKIPGQP HHHCCCCCCCCCEECCCEEEECCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCC DIEVRLDNPASGQGMCAIALIEKDGGKLKVTKEERYFRGHKDMDETYRWGLRWVSGSK CEEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHCCCCCHHHHHHHCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]