| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is terZ [H]
Identifier: 83592229
GI number: 83592229
Start: 1069623
End: 1070207
Strand: Reverse
Name: terZ [H]
Synonym: Rru_A0893
Alternate gene names: 83592229
Gene position: 1070207-1069623 (Counterclockwise)
Preceding gene: 83592230
Following gene: 83592228
Centisome position: 24.59
GC content: 60.85
Gene sequence:
>585_bases ATGGGCGTATCGCTGACCAAAGGCCAGAAGGTAAGTCTTTCCAAGGACGGCGCCGGCCTGACCCGTATTTTCATGGGCCT GGGCTGGGACGCCGCCAAGAAGGGCGGCTTGCTTGGCGGCCTGTTTGGCGGCGGCGGTGGGGACATCGATCTCGATGCCT CCTGCCTTGTTTTCGATGACGCCGGCCAGCCCGTCGACCAGATCTGGTTCCGCCAGCTTAGCGGCGTGAACGGCGCGATC GTCCATACCGGCGATAACGTCACCGGGGCGGGCGACGGCGATGACGAAACGATCAAGGTCGATCTGTCCAGGCTTCCCGC CAGCGTCAAATCCCTGGTTTTCGTCGTCAATTCCTTCCGCGGCCAGACCTTCGACAAGGTCGCCAACGCCAAATGCCGGG TGGTCGATGACACCTCCGGGGTTGAATTGGCGTCGTTCACCCTCAGCGAGGCCGGGTCCCATACCGGTCTTGTGATGGCC AAAATCTACCGCCACAATGACGAGTGGAAAATCCATGCCATCGGTGAAAAGACCGTCGGCAAGACCTTCCACGACATGAT GCCGGCGATTCAGGGCACGCTTTAA
Upstream 100 bases:
>100_bases CTAAGGCCGGCAAGGCCGGATTTCCGATCGTCGAGAAAACGGCAAATCCCTTGTGCGACACGAGGATCGGGCGGGGATTT GCCTTCAAAGGAGGATTGTC
Downstream 100 bases:
>100_bases GCGGCCATCGAACCGGGACGCGCTTCAGGCGTCCAGCGAAAAGGGGGACGGATGACCGTCGTCACATTGACTCCGGGGGC GAATACCACCATCGCCGACT
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MGVSLTKGQKVSLSKDGAGLTRIFMGLGWDAAKKGGLLGGLFGGGGGDIDLDASCLVFDDAGQPVDQIWFRQLSGVNGAI VHTGDNVTGAGDGDDETIKVDLSRLPASVKSLVFVVNSFRGQTFDKVANAKCRVVDDTSGVELASFTLSEAGSHTGLVMA KIYRHNDEWKIHAIGEKTVGKTFHDMMPAIQGTL
Sequences:
>Translated_194_residues MGVSLTKGQKVSLSKDGAGLTRIFMGLGWDAAKKGGLLGGLFGGGGGDIDLDASCLVFDDAGQPVDQIWFRQLSGVNGAI VHTGDNVTGAGDGDDETIKVDLSRLPASVKSLVFVVNSFRGQTFDKVANAKCRVVDDTSGVELASFTLSEAGSHTGLVMA KIYRHNDEWKIHAIGEKTVGKTFHDMMPAIQGTL >Mature_193_residues GVSLTKGQKVSLSKDGAGLTRIFMGLGWDAAKKGGLLGGLFGGGGGDIDLDASCLVFDDAGQPVDQIWFRQLSGVNGAIV HTGDNVTGAGDGDDETIKVDLSRLPASVKSLVFVVNSFRGQTFDKVANAKCRVVDDTSGVELASFTLSEAGSHTGLVMAK IYRHNDEWKIHAIGEKTVGKTFHDMMPAIQGTL
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20356; Mature: 20225
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSLTKGQKVSLSKDGAGLTRIFMGLGWDAAKKGGLLGGLFGGGGGDIDLDASCLVFDD CCCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCCCEEEEECC AGQPVDQIWFRQLSGVNGAIVHTGDNVTGAGDGDDETIKVDLSRLPASVKSLVFVVNSFR CCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHC GQTFDKVANAKCRVVDDTSGVELASFTLSEAGSHTGLVMAKIYRHNDEWKIHAIGEKTVG CCHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCEEEEEECCHHHH KTFHDMMPAIQGTL HHHHHHHHHHHCCC >Mature Secondary Structure GVSLTKGQKVSLSKDGAGLTRIFMGLGWDAAKKGGLLGGLFGGGGGDIDLDASCLVFDD CCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCCCEEEEECC AGQPVDQIWFRQLSGVNGAIVHTGDNVTGAGDGDDETIKVDLSRLPASVKSLVFVVNSFR CCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHC GQTFDKVANAKCRVVDDTSGVELASFTLSEAGSHTGLVMAKIYRHNDEWKIHAIGEKTVG CCHHHHHCCCEEEEEECCCCCEEEEEEHHHCCCCCCEEEEEEEECCCCEEEEEECCHHHH KTFHDMMPAIQGTL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665479 [H]