| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fecR [C]
Identifier: 83592220
GI number: 83592220
Start: 1057291
End: 1058247
Strand: Direct
Name: fecR [C]
Synonym: Rru_A0884
Alternate gene names: 83592220
Gene position: 1057291-1058247 (Clockwise)
Preceding gene: 83592219
Following gene: 83592221
Centisome position: 24.29
GC content: 69.8
Gene sequence:
>957_bases ATGATCCCCGCCGATCATTCGCTTCCCGCCAGCGTTCTTGAACAGGCCTCCGACTGGGTCTTTCGCCAGCAAGGAGCCCT GGGGGAGCCGCCCCCCCGCGCCGATTTCGAGGCTTGGCTGGCCGCTGATCCCCGCCATGGCGAGGCTTGGCGTTTGGCCT GCGCGACCTGGGGCGCCACCGGGGCCCTTGCTCCCGTCTTCGCCGCGCCGCCCCGGCCGCTGTGCCGACCGCCGCGCCGC AAGCGGCCGTCCAAACCCCTTGTCGCCCTGGCCCTGGCCGCCTGCTTGGCCGCCTTCGTCGTGCTGTCGCCGCTGCGTCT GCTTTGGCAAGCCGATCATCTGACCGGCAGCGGCGAAAGCGCGACGGTGTCGTTGCGCGATGGATCACGGGTCGCCCTTG CCGCCGACAGCGCGCTCAGCACCCGGATTTCCGAGGCCGGACGGGCGGTCACCTTGCTGAAGGGGCAGGCGTTTTTTCAG GTCGCCCCCGACCGGACCCGTCCCTTCGTGGTCAGCGGCGGCGGGGTGTCGGTCACCGTCACCGGAACCGCCTTCGATGT CGCCCTTGATGACGGTCGGGTGACGGTGGCGGTGGCCGAGGGCGGGGTGAGGGTTGATTACCAGGGGCGGAGCGAGCGCC TTGTTCCCGGCGAGAAGGTGAGCGTCGATCCGGCGATGGGCGAAATCCGCCGCGCCGCCGTTGATCCGGCCGATGTGGCG GCGTGGCGCCAGGGGCGGCTGGTCAGCGACAACCAGCGGCTTTCGGCGGTGATCGAGGCCCTTCGCCGCCAGTATTCCGG GGTGATCGTGCTGACCGATGCCGCCCTCGGCGAGACCCCGGTGACCGGTGTCTATGATCTCGAGGATCCCGAACGGGCCT TGCGCGCCTTGGTTAGCCCCTTTGGCGGAACGGTGCGGCGGTTGACCCCCTATTTGCTGGTGGTTTCCCCGCCTTAA
Upstream 100 bases:
>100_bases CCAGCACCTGGAGGTTTCCCCGGCCACCGCCCACCGTTTGGCCCGCGACGCCATGGTCCACGTGATGGGGCGCCTGCAGG GCGCGCAAGGGTAAGGCGCC
Downstream 100 bases:
>100_bases AAAAAAATTGCCGAAGCGTGAGAGGATACCCCGCCCAGCTTCGTCTCCTTTCCAGGGTGCGAGTAACACGCATTAGCGTG TGATGTGTTGGAAAGAGGGA
Product: putative FecR
Products: NA
Alternate protein names: FecR Protein; Transmembrane Sensor; Sigma Factor Regulatory Protein FecR/PupR Family; Fe2+-Dicitrate Sensor Membrane Component; Regulatory Protein; FecR-Like Transmembrane Sensor; Anti-Feci Sigma Factor Fecr; Transmembrane Sensor Protein; FecR Family Protein; Two Component Sensor Histidine Kinase FecR/PupR; Anti-Sigma Factor FecR Family; Two Component Sensor Kinase; Ferric Citrate Sensor FecR; FecR Iron Siderophore Sensor Protein; Transcriptional Regulator; Iron Siderophore Sensor Protein; FecR Family; Anti-Sigma Factor; Iron(III) Dicitrate Sensor Protein; Anti-Sigma Factor FecR-Like Protein; Protein FecR; Anti Sigma Factor; FecR Family Transmembrane Sensor Protein; IRON Transport Regulator Transmembrane Protein; Iron Acquisition-Like Protein; Anti-Sigma Factor Protein FecR Family; Iron-Dicitrate Sensor Membrane Component; Regulator Of Iron Dicitrate Transport; FecR Iron Sensor Protein; Iron Uptake Transcriptional Regulator Protein; Two-Component System Sensor Protein; Iron Dicitrate Transmembrane Sensor FecR
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGATGALAPVFAAPPRPLCRPPRR KRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGESATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQ VAPDRTRPFVVSGGGVSVTVTGTAFDVALDDGRVTVAVAEGGVRVDYQGRSERLVPGEKVSVDPAMGEIRRAAVDPADVA AWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRALVSPFGGTVRRLTPYLLVVSPP
Sequences:
>Translated_318_residues MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGATGALAPVFAAPPRPLCRPPRR KRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGESATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQ VAPDRTRPFVVSGGGVSVTVTGTAFDVALDDGRVTVAVAEGGVRVDYQGRSERLVPGEKVSVDPAMGEIRRAAVDPADVA AWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRALVSPFGGTVRRLTPYLLVVSPP >Mature_318_residues MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGATGALAPVFAAPPRPLCRPPRR KRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGESATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQ VAPDRTRPFVVSGGGVSVTVTGTAFDVALDDGRVTVAVAEGGVRVDYQGRSERLVPGEKVSVDPAMGEIRRAAVDPADVA AWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRALVSPFGGTVRRLTPYLLVVSPP
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33689; Mature: 33689
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGAT CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCCCC GALAPVFAAPPRPLCRPPRRKRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGES CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE ATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQVAPDRTRPFVVSGGGVSVTV EEEEECCCCEEEEEECHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCEEEECCCEEEEE TGTAFDVALDDGRVTVAVAEGGVRVDYQGRSERLVPGEKVSVDPAMGEIRRAAVDPADVA ECCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCHHHHHHHHHHCCHHHHH AWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRALVSP HHHCCCEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHH FGGTVRRLTPYLLVVSPP CCCHHHCCCCEEEEECCC >Mature Secondary Structure MIPADHSLPASVLEQASDWVFRQQGALGEPPPRADFEAWLAADPRHGEAWRLACATWGAT CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCCCC GALAPVFAAPPRPLCRPPRRKRPSKPLVALALAACLAAFVVLSPLRLLWQADHLTGSGES CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE ATVSLRDGSRVALAADSALSTRISEAGRAVTLLKGQAFFQVAPDRTRPFVVSGGGVSVTV EEEEECCCCEEEEEECHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCEEEECCCEEEEE TGTAFDVALDDGRVTVAVAEGGVRVDYQGRSERLVPGEKVSVDPAMGEIRRAAVDPADVA ECCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCHHHHHHHHHHCCHHHHH AWRQGRLVSDNQRLSAVIEALRRQYSGVIVLTDAALGETPVTGVYDLEDPERALRALVSP HHHCCCEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHH FGGTVRRLTPYLLVVSPP CCCHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA