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The map label for this gene is glxA [H]

Identifier: 83592097

GI number: 83592097

Start: 890318

End: 891334

Strand: Direct

Name: glxA [H]

Synonym: Rru_A0758

Alternate gene names: 83592097

Gene position: 890318-891334 (Clockwise)

Preceding gene: 83592096

Following gene: 83592098

Centisome position: 20.45

GC content: 70.11

Gene sequence:

>1017_bases
ATGACGGCCGCCGCCGCCGGACCCGAGGAGGTCGCCGTCTATGTCGTGCTGCCGCCGCGCGTGCTGCTGCTCGATGTCGC
CGGGCCGATCGAGGTGTTGCGCAAGGCCAACCTTGAGCAGGACCGGCTACGCTTCGTGGTGCATTACGTCGGTCCGGCGG
CGACGGTCTCGAGTTCCATCGGCTTGGAGGTGGCCGGGGTGGCGCCCTTGCCCGATACCCTGCCCGAGGGCGCCCTGGTG
GTGATCGCCGGAAGCGCCGCGGTGACGCTGGGGGCGGTCCCCGCCAACCAAGCCGACGACGCCGCCAAGGACGCGGCCAT
CGTTGATTGGTTGGCCCAAAGGGTGCGTCCGGGGATCGGCCTGATATCGATCTGTTCGGGCGCCTTGCTGGCGGCGCGGG
CTGGTTTGCTTGATGGCGTCGCCTGCACCACCCATCACGCCTGCTGCGCCGAGCTGGCCCGGCTGGCGCCCAAGGCCCGG
GTCGTGGAAAACCGCCTGTATGTCGAGGATGGCGAGCGGCTGTCGAGCGCCGGCGTCACCGCCGGCATCGATCTGATGCT
TCATCTGGTGGCCCGGCGCATCGGCCCAGCCTGCGCCCTGGCGGTGGCGCGCTATCTGGTGCTCTATCTGCGTCGCGGGC
CGGGCGATCCCCAGCTTTCACCCTGGCTGGAAGGCCGCAATCACCTGCACCGGGCCATCCACCGCGCCCAGGACGCCGTG
GCCGCCGATCCGGCCCGGCCATGGAGCCTGGGCGATCTGGCCGAGGTCGCCGCCATCAGCCCGCGCTCGTTGTCGCGGCT
GTTCAACGACCAGGTCGGAATGAGCGTGACCGATTATGTCAACCGCCTGCGCATCGCCCTTGCCCACGACATCCTGACGG
CGACCCGGCTTGATATGGAAGCCGTGGCCGAACGCGCGGGCTTTTCCTCGACCCGCCAGTTCCGCCGCGCCTGGAGCCGC
CTGCACGCCCTGCCGCCAAGCCGAACCCGCCCCGTTGGTAAAGTGGAGCAGGGGTGA

Upstream 100 bases:

>100_bases
AGGAGATCAAGGCCCGCACCGAGCTGGTTCTGGCCGACCGCTTCGCCCGCATCGCCACCGTCGAGGCGGCTTTGGCCGGT
CCCCTGGTCCCCGCCGCCCG

Downstream 100 bases:

>100_bases
GGGGAAAATTCTCCCGATTGGAAGATCTTCTTTCCATAGTCCGGTTCTTGGCAAGGGAAGGGGGAGAAAGGGGGGCCATA
AGACAAATCAAAGACTCATA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTAAAAGPEEVAVYVVLPPRVLLLDVAGPIEVLRKANLEQDRLRFVVHYVGPAATVSSSIGLEVAGVAPLPDTLPEGALV
VIAGSAAVTLGAVPANQADDAAKDAAIVDWLAQRVRPGIGLISICSGALLAARAGLLDGVACTTHHACCAELARLAPKAR
VVENRLYVEDGERLSSAGVTAGIDLMLHLVARRIGPACALAVARYLVLYLRRGPGDPQLSPWLEGRNHLHRAIHRAQDAV
AADPARPWSLGDLAEVAAISPRSLSRLFNDQVGMSVTDYVNRLRIALAHDILTATRLDMEAVAERAGFSSTRQFRRAWSR
LHALPPSRTRPVGKVEQG

Sequences:

>Translated_338_residues
MTAAAAGPEEVAVYVVLPPRVLLLDVAGPIEVLRKANLEQDRLRFVVHYVGPAATVSSSIGLEVAGVAPLPDTLPEGALV
VIAGSAAVTLGAVPANQADDAAKDAAIVDWLAQRVRPGIGLISICSGALLAARAGLLDGVACTTHHACCAELARLAPKAR
VVENRLYVEDGERLSSAGVTAGIDLMLHLVARRIGPACALAVARYLVLYLRRGPGDPQLSPWLEGRNHLHRAIHRAQDAV
AADPARPWSLGDLAEVAAISPRSLSRLFNDQVGMSVTDYVNRLRIALAHDILTATRLDMEAVAERAGFSSTRQFRRAWSR
LHALPPSRTRPVGKVEQG
>Mature_337_residues
TAAAAGPEEVAVYVVLPPRVLLLDVAGPIEVLRKANLEQDRLRFVVHYVGPAATVSSSIGLEVAGVAPLPDTLPEGALVV
IAGSAAVTLGAVPANQADDAAKDAAIVDWLAQRVRPGIGLISICSGALLAARAGLLDGVACTTHHACCAELARLAPKARV
VENRLYVEDGERLSSAGVTAGIDLMLHLVARRIGPACALAVARYLVLYLRRGPGDPQLSPWLEGRNHLHRAIHRAQDAVA
ADPARPWSLGDLAEVAAISPRSLSRLFNDQVGMSVTDYVNRLRIALAHDILTATRLDMEAVAERAGFSSTRQFRRAWSRL
HALPPSRTRPVGKVEQG

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35826; Mature: 35695

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAAGPEEVAVYVVLPPRVLLLDVAGPIEVLRKANLEQDRLRFVVHYVGPAATVSSSI
CCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCC
GLEVAGVAPLPDTLPEGALVVIAGSAAVTLGAVPANQADDAAKDAAIVDWLAQRVRPGIG
CEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LISICSGALLAARAGLLDGVACTTHHACCAELARLAPKARVVENRLYVEDGERLSSAGVT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHCCCH
AGIDLMLHLVARRIGPACALAVARYLVLYLRRGPGDPQLSPWLEGRNHLHRAIHRAQDAV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AADPARPWSLGDLAEVAAISPRSLSRLFNDQVGMSVTDYVNRLRIALAHDILTATRLDME
HCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVAERAGFSSTRQFRRAWSRLHALPPSRTRPVGKVEQG
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAAAAGPEEVAVYVVLPPRVLLLDVAGPIEVLRKANLEQDRLRFVVHYVGPAATVSSSI
CCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCC
GLEVAGVAPLPDTLPEGALVVIAGSAAVTLGAVPANQADDAAKDAAIVDWLAQRVRPGIG
CEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LISICSGALLAARAGLLDGVACTTHHACCAELARLAPKARVVENRLYVEDGERLSSAGVT
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHCCCH
AGIDLMLHLVARRIGPACALAVARYLVLYLRRGPGDPQLSPWLEGRNHLHRAIHRAQDAV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AADPARPWSLGDLAEVAAISPRSLSRLFNDQVGMSVTDYVNRLRIALAHDILTATRLDME
HCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVAERAGFSSTRQFRRAWSRLHALPPSRTRPVGKVEQG
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]