| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yhdN [H]
Identifier: 83592098
GI number: 83592098
Start: 891666
End: 892574
Strand: Direct
Name: yhdN [H]
Synonym: Rru_A0759
Alternate gene names: 83592098
Gene position: 891666-892574 (Clockwise)
Preceding gene: 83592097
Following gene: 83592099
Centisome position: 20.48
GC content: 67.66
Gene sequence:
>909_bases ATGCGAACGAGGCGCCTGGGAAAGACCGCGCTGCGCGCGTCGCAGGTTGGTCTGGGCACATGGCCGCTGGCGGGCAATGC CGGCTTGGCGGGCTATGGCGCCGTTGATCCCGAGCGGGCCGAAGCCACCGTTCGCGCCGCCCTGGCGGCGGGCATCACGC TTTTCGATACAGCGGGCATCTATGGCGATGGGTTCGCCGAAAGTCTGTTGGGGCGGCTGCTTCCCGGCGGCGAGGGGGGG GCGGTCGTGTGCACCAAGGGGGGCTTCTCGCATTTCGCCCAGGGCAGGGCGCCCGACCGCCGCGCTTTCAAGGCCGAGGT GGCGGCGAGTCGTGATCGCCTGCGCCGCGAGGTGATCGACATCTATCTGTTGCATAACCCGCCGCCCGTCCTGATCGGCC TGCCCGACGTTTACCGCCCGCTGCAAGACCTGCGCGATCATGGGTGGATCGGCCATATCGGCGTTTCCGTCGCCCGCGCC ATCGATGGCTGGCTGGCCCTCGACCGCCCCGAGGTCGAAGTGGTGCAACTACCCTTTAACCTGCTTAATACCCAGGCCGA TCAAGGGCTTCTAAGCCGGGCCGCCGATCTGGGCAAGGCGGTTCTGGCCCGTGAGGTTCTGGCGAACGGCTGGTTGTCGG GACGCTATGGCCCCGCATCGACCTTCGCCGCCGGGGACTTCCGCCAGCATCTGCCGGCCGAGGTCAAGGCGGCCATCGCC GGCGATCGCGCCGCCCTTGAGCCCTATCGCCGCCCGGGCGAAAGCTGGGTGGATTTTTCGCTGCGCTTCGTTCTCGACCG TCCAGAAATTTCCAGCGCCATCGTCGGGGCGAGACATCCCCAGCAGATCGAGGCGCTTTCAAAAGCCGGTACCCTGTCCC CCTCGCCTTCGTGGCACCCGGCGGACTGA
Upstream 100 bases:
>100_bases GCAATTCCCTTTCAAGGGGAATTGCGCTAGCGTTCTCCTTGTAAGGGTGTTTTGGCGTGAATGACGGTCGGAGTGGGGTT CTGAACAAGGGGGGACTCGG
Downstream 100 bases:
>100_bases AGGGCAGGCTGTTTGCATCCCTGATCTTTGGCAATGGAGGACACCATGGCGGACCCAAGAAATCCTACTGGCCCCTTCGC TTCAAGCCCACGCGGCCCCT
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRTRRLGKTALRASQVGLGTWPLAGNAGLAGYGAVDPERAEATVRAALAAGITLFDTAGIYGDGFAESLLGRLLPGGEGG AVVCTKGGFSHFAQGRAPDRRAFKAEVAASRDRLRREVIDIYLLHNPPPVLIGLPDVYRPLQDLRDHGWIGHIGVSVARA IDGWLALDRPEVEVVQLPFNLLNTQADQGLLSRAADLGKAVLAREVLANGWLSGRYGPASTFAAGDFRQHLPAEVKAAIA GDRAALEPYRRPGESWVDFSLRFVLDRPEISSAIVGARHPQQIEALSKAGTLSPSPSWHPAD
Sequences:
>Translated_302_residues MRTRRLGKTALRASQVGLGTWPLAGNAGLAGYGAVDPERAEATVRAALAAGITLFDTAGIYGDGFAESLLGRLLPGGEGG AVVCTKGGFSHFAQGRAPDRRAFKAEVAASRDRLRREVIDIYLLHNPPPVLIGLPDVYRPLQDLRDHGWIGHIGVSVARA IDGWLALDRPEVEVVQLPFNLLNTQADQGLLSRAADLGKAVLAREVLANGWLSGRYGPASTFAAGDFRQHLPAEVKAAIA GDRAALEPYRRPGESWVDFSLRFVLDRPEISSAIVGARHPQQIEALSKAGTLSPSPSWHPAD >Mature_302_residues MRTRRLGKTALRASQVGLGTWPLAGNAGLAGYGAVDPERAEATVRAALAAGITLFDTAGIYGDGFAESLLGRLLPGGEGG AVVCTKGGFSHFAQGRAPDRRAFKAEVAASRDRLRREVIDIYLLHNPPPVLIGLPDVYRPLQDLRDHGWIGHIGVSVARA IDGWLALDRPEVEVVQLPFNLLNTQADQGLLSRAADLGKAVLAREVLANGWLSGRYGPASTFAAGDFRQHLPAEVKAAIA GDRAALEPYRRPGESWVDFSLRFVLDRPEISSAIVGARHPQQIEALSKAGTLSPSPSWHPAD
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=310, Percent_Identity=26.4516129032258, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=26.3665594855305, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27436966, Length=310, Percent_Identity=26.4516129032258, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI27436969, Length=235, Percent_Identity=28.5106382978723, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504825, Length=232, Percent_Identity=28.448275862069, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1788070, Length=310, Percent_Identity=27.0967741935484, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI24640980, Length=159, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549126, Length=159, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 32241; Mature: 32241
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRLGKTALRASQVGLGTWPLAGNAGLAGYGAVDPERAEATVRAALAAGITLFDTAGI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCC YGDGFAESLLGRLLPGGEGGAVVCTKGGFSHFAQGRAPDRRAFKAEVAASRDRLRREVID CCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHE IYLLHNPPPVLIGLPDVYRPLQDLRDHGWIGHIGVSVARAIDGWLALDRPEVEVVQLPFN EEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHH LLNTQADQGLLSRAADLGKAVLAREVLANGWLSGRYGPASTFAAGDFRQHLPAEVKAAIA HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHC GDRAALEPYRRPGESWVDFSLRFVLDRPEISSAIVGARHPQQIEALSKAGTLSPSPSWHP CCHHHHHHHHCCCCHHHCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC AD CC >Mature Secondary Structure MRTRRLGKTALRASQVGLGTWPLAGNAGLAGYGAVDPERAEATVRAALAAGITLFDTAGI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCC YGDGFAESLLGRLLPGGEGGAVVCTKGGFSHFAQGRAPDRRAFKAEVAASRDRLRREVID CCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHE IYLLHNPPPVLIGLPDVYRPLQDLRDHGWIGHIGVSVARAIDGWLALDRPEVEVVQLPFN EEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHH LLNTQADQGLLSRAADLGKAVLAREVLANGWLSGRYGPASTFAAGDFRQHLPAEVKAAIA HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHC GDRAALEPYRRPGESWVDFSLRFVLDRPEISSAIVGARHPQQIEALSKAGTLSPSPSWHP CCHHHHHHHHCCCCHHHCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC AD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]