| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ptsP [H]
Identifier: 83592084
GI number: 83592084
Start: 870988
End: 873255
Strand: Direct
Name: ptsP [H]
Synonym: Rru_A0745
Alternate gene names: 83592084
Gene position: 870988-873255 (Clockwise)
Preceding gene: 83592083
Following gene: 83592085
Centisome position: 20.01
GC content: 66.62
Gene sequence:
>2268_bases ATGCCTGAGCGGGAACGCGACGCACGCAGCCTGCTTGGTCGTCTGCGCGATATCATGGCCGGTGGCGGGTCGCCGCAGGT CCGCCTTGACCTTGTCACGGCCTTGATCGCGCGCGGCCTGGGGACCGATGTCTGTTCGTGCTACGTGCTGCGCGCCGGCG AGGTTCTGGAGCTTTTCGCCACCGAGGGCCTGTCGCAGGCCGCCGTTCACAAGACGCGACTGCGGGTTGGCGAAGGGCTG ATCGGCGAGGTGGCGGCCACCGGCCGCGCCCTGACCGTGGCCGACGCCTGGTCCCACCCCAATTTCGCCTATCGCCCGGA AACCGGGGAAGATCTGTTCCAGTCGCTGATGGGCGTGCCGATGATACGCGGCGGCCGGGTGATCGGCGTTCTGGCCGTGC AAAATCGCGAGTCGCGTGACTACGAGGAGTTCGAGCAGGAAATCCTCGAAACCGTCGCCATGGTTCTGGCCGAGATGCTG GCCGGGGCCGATCTGGTGGGCAAGGACGAACTGGGGCCGGTGGCGGGCAATGCCGTGCTGCCGATGCGCCTGGAGGGCGA TCGCCTGAACGGCGGCATCGGCCTGGGAACCGCCGTCTATCATCGGCCCGAGGTGATGGTCCACCGGCTGGTTGGCGACG ATCCCGAAACCGAAATGGAGCGCCTGCGCACGGCGCTGTCGGAAATGCGCCAGAGCATCGACAGCATGCTGGCCCTGCAC CGCGACGTTCCGGGCGAATATCACGACGTTCTGGAAACCTTCCGCATGTTCGCCGAGGATGCGGGCTGGATCGGTCGTAT CTCCGAGCATATCCAGACCGGGCTGTCGGCCGAGGGCGCGGTGCGCAAGGTCGATGATGACATGCGCCTGCGCATGTCCC AGGTCAGCGATCCCTATATCCGCGAACGCCTTCACGACCTCGAGGATCTGGCCAACCGCCTGCTGCGCCATCTGACCGGC GACGGCTCGACCGCCGCGCTCAGCGACCTGCCCGAGCATGTCGTGCTGATCTGCCGCAGCCTGGGGCCGGCCGAACTCCT TGACTATGACCCCTCGCGCCTGCGCGGGGTGATCATGGAGGAGGGCAGTTCGGGCATGCATGCGGTGATCGTGGCCAAGG CGCTCGATATTCCGGTGATCGGCCGGGTACCCGATGTCTTCCAGCGCGTCGCTCCGCTTGATCAGGTGGTGGTCGATGGC GATCACGGTCATGTTTTCGTCCGCCCCGGCGAAGACGTGCGCGAAGCGTTCCTTAATGGCGTGCTGGCGCGCAAGCAGCG CCGCGCCTTCTATCAAAGCTTCCGCGACCAGCCCGCCGTCAGCCGCGACGGCTATCGCATCAAATTGATGATCAACGCCG GCCTGCTGTTCGATATGGAGGGGCTGGTCGAAAGCGGGGCCGACGGGGTGGGGCTTTATCGCACCGAGATCCCCTTCATG GCCCGGCCGTCGCTGCCCAGCGTCGAGACCCAGACCGAGCTTTACGACAAGGTTCTGGAACTGGCCGGCGACAAGCCGGT CACCTTCCGCACCCTTGATGTCGGCGGCGACAAGCTGCTGCCCTATTGGAACCGCGCGCCCGAAGACAATCCGGCGATGG GCTGGCGCTCGATCCGCATCACCCTTGACCGGCCGGCGATCCTGCGCGAGCAGTTGCGCGCCCTGATCCGCGCCTCGGGA CAGCGGGAATTGCGCGTCATGTTCCCGATGGTCGCCAACGTCGCCGAGTTCCGCGCCGCCCGCAAGGTGCTGATGGCCGA ACTGGCGCGCGAGGCGGCGCGCGGCACGCCGCCGCCCCGGCGGGTGCGCGTTGGAACCATGCTCGAGGTTCCCTCGTTGA TCTGGCAACTGCCGGCCCTGCTCAAGGATGGCGTCGATTTCATCTCGGTGGGCAGCAATGATCTGATGCAGTTCACCTTT GCCGCCGATCGCGCCAATTCGCGGCTGGCCGGGCGCTATGATCCGCTGTCGCCGGCCGCGCTGTCGATCCTGCATCGGGT GGTCACGCTCTGCGACGCCGCCGCCGTGCCGCTGTCGCTGTGTGGCGAGATGGCCTCGCGGCCGCTTGACGCCATGGCCC TGGTGGCCCTGGGCTTCCGCTTCCTGTCGGTGGCGGCGCCGGGGGTCGGGCCGGTCAAGCAGATGCTGCTGTCGACCAAT ATCGATCAGGTCCGTCCCTATGTGGAAACCCTGCTGGATTTGCCCGACGCCTCGGTCCGCGAAAACCTGCGCTCCTTCGC CCTTGACCACGGTATTTCCCTGTCGTAA
Upstream 100 bases:
>100_bases GAAATACTGGCCGAATTGCGGGGACAGGCCGTCGCGGCCCTGACCCGCAGGGCCGCCCGGCAAGCGGGTGGTTGAGCGTA CGAAAGGGGGGCATCGGGAG
Downstream 100 bases:
>100_bases GGCAGCCGGGCGCCGCGATCGTTGCGGAAACGAGCGTTGTTCCCAGAGGGGTTTTTCGCTAGGTTCGTGGCGTCCGCGCC GGATTGCCGCCGGGGGAGAA
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MPERERDARSLLGRLRDIMAGGGSPQVRLDLVTALIARGLGTDVCSCYVLRAGEVLELFATEGLSQAAVHKTRLRVGEGL IGEVAATGRALTVADAWSHPNFAYRPETGEDLFQSLMGVPMIRGGRVIGVLAVQNRESRDYEEFEQEILETVAMVLAEML AGADLVGKDELGPVAGNAVLPMRLEGDRLNGGIGLGTAVYHRPEVMVHRLVGDDPETEMERLRTALSEMRQSIDSMLALH RDVPGEYHDVLETFRMFAEDAGWIGRISEHIQTGLSAEGAVRKVDDDMRLRMSQVSDPYIRERLHDLEDLANRLLRHLTG DGSTAALSDLPEHVVLICRSLGPAELLDYDPSRLRGVIMEEGSSGMHAVIVAKALDIPVIGRVPDVFQRVAPLDQVVVDG DHGHVFVRPGEDVREAFLNGVLARKQRRAFYQSFRDQPAVSRDGYRIKLMINAGLLFDMEGLVESGADGVGLYRTEIPFM ARPSLPSVETQTELYDKVLELAGDKPVTFRTLDVGGDKLLPYWNRAPEDNPAMGWRSIRITLDRPAILREQLRALIRASG QRELRVMFPMVANVAEFRAARKVLMAELAREAARGTPPPRRVRVGTMLEVPSLIWQLPALLKDGVDFISVGSNDLMQFTF AADRANSRLAGRYDPLSPAALSILHRVVTLCDAAAVPLSLCGEMASRPLDAMALVALGFRFLSVAAPGVGPVKQMLLSTN IDQVRPYVETLLDLPDASVRENLRSFALDHGISLS
Sequences:
>Translated_755_residues MPERERDARSLLGRLRDIMAGGGSPQVRLDLVTALIARGLGTDVCSCYVLRAGEVLELFATEGLSQAAVHKTRLRVGEGL IGEVAATGRALTVADAWSHPNFAYRPETGEDLFQSLMGVPMIRGGRVIGVLAVQNRESRDYEEFEQEILETVAMVLAEML AGADLVGKDELGPVAGNAVLPMRLEGDRLNGGIGLGTAVYHRPEVMVHRLVGDDPETEMERLRTALSEMRQSIDSMLALH RDVPGEYHDVLETFRMFAEDAGWIGRISEHIQTGLSAEGAVRKVDDDMRLRMSQVSDPYIRERLHDLEDLANRLLRHLTG DGSTAALSDLPEHVVLICRSLGPAELLDYDPSRLRGVIMEEGSSGMHAVIVAKALDIPVIGRVPDVFQRVAPLDQVVVDG DHGHVFVRPGEDVREAFLNGVLARKQRRAFYQSFRDQPAVSRDGYRIKLMINAGLLFDMEGLVESGADGVGLYRTEIPFM ARPSLPSVETQTELYDKVLELAGDKPVTFRTLDVGGDKLLPYWNRAPEDNPAMGWRSIRITLDRPAILREQLRALIRASG QRELRVMFPMVANVAEFRAARKVLMAELAREAARGTPPPRRVRVGTMLEVPSLIWQLPALLKDGVDFISVGSNDLMQFTF AADRANSRLAGRYDPLSPAALSILHRVVTLCDAAAVPLSLCGEMASRPLDAMALVALGFRFLSVAAPGVGPVKQMLLSTN IDQVRPYVETLLDLPDASVRENLRSFALDHGISLS >Mature_754_residues PERERDARSLLGRLRDIMAGGGSPQVRLDLVTALIARGLGTDVCSCYVLRAGEVLELFATEGLSQAAVHKTRLRVGEGLI GEVAATGRALTVADAWSHPNFAYRPETGEDLFQSLMGVPMIRGGRVIGVLAVQNRESRDYEEFEQEILETVAMVLAEMLA GADLVGKDELGPVAGNAVLPMRLEGDRLNGGIGLGTAVYHRPEVMVHRLVGDDPETEMERLRTALSEMRQSIDSMLALHR DVPGEYHDVLETFRMFAEDAGWIGRISEHIQTGLSAEGAVRKVDDDMRLRMSQVSDPYIRERLHDLEDLANRLLRHLTGD GSTAALSDLPEHVVLICRSLGPAELLDYDPSRLRGVIMEEGSSGMHAVIVAKALDIPVIGRVPDVFQRVAPLDQVVVDGD HGHVFVRPGEDVREAFLNGVLARKQRRAFYQSFRDQPAVSRDGYRIKLMINAGLLFDMEGLVESGADGVGLYRTEIPFMA RPSLPSVETQTELYDKVLELAGDKPVTFRTLDVGGDKLLPYWNRAPEDNPAMGWRSIRITLDRPAILREQLRALIRASGQ RELRVMFPMVANVAEFRAARKVLMAELAREAARGTPPPRRVRVGTMLEVPSLIWQLPALLKDGVDFISVGSNDLMQFTFA ADRANSRLAGRYDPLSPAALSILHRVVTLCDAAAVPLSLCGEMASRPLDAMALVALGFRFLSVAAPGVGPVKQMLLSTNI DQVRPYVETLLDLPDASVRENLRSFALDHGISLS
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=724, Percent_Identity=34.2541436464088, Blast_Score=351, Evalue=8e-98, Organism=Escherichia coli, GI1788756, Length=551, Percent_Identity=31.9419237749546, Blast_Score=290, Evalue=3e-79, Organism=Escherichia coli, GI1788726, Length=543, Percent_Identity=30.7550644567219, Blast_Score=237, Evalue=2e-63, Organism=Escherichia coli, GI48994992, Length=479, Percent_Identity=30.062630480167, Blast_Score=229, Evalue=7e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82925; Mature: 82793
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERERDARSLLGRLRDIMAGGGSPQVRLDLVTALIARGLGTDVCSCYVLRAGEVLELFA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH TEGLSQAAVHKTRLRVGEGLIGEVAATGRALTVADAWSHPNFAYRPETGEDLFQSLMGVP HCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCC MIRGGRVIGVLAVQNRESRDYEEFEQEILETVAMVLAEMLAGADLVGKDELGPVAGNAVL EECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE PMRLEGDRLNGGIGLGTAVYHRPEVMVHRLVGDDPETEMERLRTALSEMRQSIDSMLALH EEEECCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDVPGEYHDVLETFRMFAEDAGWIGRISEHIQTGLSAEGAVRKVDDDMRLRMSQVSDPYI HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCHHH RERLHDLEDLANRLLRHLTGDGSTAALSDLPEHVVLICRSLGPAELLDYDPSRLRGVIME HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHEE EGSSGMHAVIVAKALDIPVIGRVPDVFQRVAPLDQVVVDGDHGHVFVRPGEDVREAFLNG CCCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCHHHEEEECCCCEEEEECCHHHHHHHHHH VLARKQRRAFYQSFRDQPAVSRDGYRIKLMINAGLLFDMEGLVESGADGVGLYRTEIPFM HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEHHHHHHCCCCCCEEEEECCCCC ARPSLPSVETQTELYDKVLELAGDKPVTFRTLDVGGDKLLPYWNRAPEDNPAMGWRSIRI CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE TLDRPAILREQLRALIRASGQRELRVMFPMVANVAEFRAARKVLMAELAREAARGTPPPR EECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVRVGTMLEVPSLIWQLPALLKDGVDFISVGSNDLMQFTFAADRANSRLAGRYDPLSPAA CEEECHHHHHHHHHHHHHHHHHCCCCEEECCCCHHEEEEEHHHCCCCCCCCCCCCCCHHH LSILHRVVTLCDAAAVPLSLCGEMASRPLDAMALVALGFRFLSVAAPGVGPVKQMLLSTN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC IDQVRPYVETLLDLPDASVRENLRSFALDHGISLS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PERERDARSLLGRLRDIMAGGGSPQVRLDLVTALIARGLGTDVCSCYVLRAGEVLELFA CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH TEGLSQAAVHKTRLRVGEGLIGEVAATGRALTVADAWSHPNFAYRPETGEDLFQSLMGVP HCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCC MIRGGRVIGVLAVQNRESRDYEEFEQEILETVAMVLAEMLAGADLVGKDELGPVAGNAVL EECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE PMRLEGDRLNGGIGLGTAVYHRPEVMVHRLVGDDPETEMERLRTALSEMRQSIDSMLALH EEEECCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDVPGEYHDVLETFRMFAEDAGWIGRISEHIQTGLSAEGAVRKVDDDMRLRMSQVSDPYI HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCCCHHH RERLHDLEDLANRLLRHLTGDGSTAALSDLPEHVVLICRSLGPAELLDYDPSRLRGVIME HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHEE EGSSGMHAVIVAKALDIPVIGRVPDVFQRVAPLDQVVVDGDHGHVFVRPGEDVREAFLNG CCCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCHHHEEEECCCCEEEEECCHHHHHHHHHH VLARKQRRAFYQSFRDQPAVSRDGYRIKLMINAGLLFDMEGLVESGADGVGLYRTEIPFM HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEHHHHHHCCCCCCEEEEECCCCC ARPSLPSVETQTELYDKVLELAGDKPVTFRTLDVGGDKLLPYWNRAPEDNPAMGWRSIRI CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE TLDRPAILREQLRALIRASGQRELRVMFPMVANVAEFRAARKVLMAELAREAARGTPPPR EECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVRVGTMLEVPSLIWQLPALLKDGVDFISVGSNDLMQFTFAADRANSRLAGRYDPLSPAA CEEECHHHHHHHHHHHHHHHHHCCCCEEECCCCHHEEEEEHHHCCCCCCCCCCCCCCHHH LSILHRVVTLCDAAAVPLSLCGEMASRPLDAMALVALGFRFLSVAAPGVGPVKQMLLSTN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC IDQVRPYVETLLDLPDASVRENLRSFALDHGISLS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]