| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592083
Identifier: 83592083
GI number: 83592083
Start: 869898
End: 870962
Strand: Direct
Name: 83592083
Synonym: Rru_A0744
Alternate gene names: NA
Gene position: 869898-870962 (Clockwise)
Preceding gene: 83592082
Following gene: 83592084
Centisome position: 19.98
GC content: 67.42
Gene sequence:
>1065_bases ATGAAGGACGCGGCGATGAACGGGTGGGCGGAAGAACGGCTGGACGAGCTTTGGGCCCGTGGCCGCGCCTTCCTGGGCTG CGATACGGCGATTCTCGGCGGCGCCATGGCCTGGGTCTCGGAACGTCATCTGGTTTCGGCGATTTCGGGGGCCGGCGGCT TCGGGGTCATCGCCTGCGGTTCGATGCCGTCCGATCTGTTGTCCAAGGAGATCGCCGCCACCCGCGCCCTTTTGGAGGGG ATGGGCGGCGAGCGCCCTTTCGGCGTCAATCTGATCACCATGCATCCCGAACTCGATCGTTTGATCGATTTGTGCGGCGA GCACCGGGTTAGCCATGTGGTTCTGGCCGGCGGCCTGCCGAGTGCCGCGTCGATCAAGCGCGTCAAGGATCTGGGGGCGC GCTGCATCTGCTTCGCCCCCGCCCTGGCCCTGGCGCGCAAGCTGGTGCGATCGGGGGCCGATGCCCTGGTGATCGAAGGG GCCGAGGCCGGGGGGCATATCGGCCCGGTTTCGACCAGCGTCCTCGCCCAGGAGATCCTGCCCGAGGTCCCCGAGATTCC GATCTTCGTCGCCGGCGGCATCGGCCGGGGCGAGGCGATCTTGTCCTATCTGGAGATGGGCGCCGCCGGGGTGCAGATCG GCACGCGCTTCGTGTGCGCCACCGAATGCATCGCCCATCCCAACTTCAAGAAGGCCTTCATCCGCGCCAGCGCCCGCGAC GCGGTGCCGACCATCCAGATCGACCCCCAGTTTCCGGTGATCCCGGTGCGGGCCCTGGCCAATAAGGGAACCGCCCGCTT CATGGAAATGCAGCGGACCGTCATCGACCGCTTTCACAACGGCGAGATCGATCAGAAGTCCGCCCAGCTTGAAATCGAGC ACTTCTGGGCCGGCGCCCTGCGTCGCGCCGTGATCGAAGGCGATGTGGACTCGGGTTCGCTGATGGCCGGCCAGAGCGTG GGCATGGTCAAGCGCGAGGAGCCCGTCGCCGAAATACTGGCCGAATTGCGGGGACAGGCCGTCGCGGCCCTGACCCGCAG GGCCGCCCGGCAAGCGGGTGGTTGA
Upstream 100 bases:
>100_bases TCAAGGTGTCGGTGCTGATCGCCGAGGAATACATGGAACTCGCGGTACGCGCGCTGCACTCCGCCTATGGGCTGGATGCG GCCTGAGGCGGAGCGGAACG
Downstream 100 bases:
>100_bases GCGTACGAAAGGGGGGCATCGGGAGATGCCTGAGCGGGAACGCGACGCACGCAGCCTGCTTGGTCGTCTGCGCGATATCA TGGCCGGTGGCGGGTCGCCG
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKDAAMNGWAEERLDELWARGRAFLGCDTAILGGAMAWVSERHLVSAISGAGGFGVIACGSMPSDLLSKEIAATRALLEG MGGERPFGVNLITMHPELDRLIDLCGEHRVSHVVLAGGLPSAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEG AEAGGHIGPVSTSVLAQEILPEVPEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVCATECIAHPNFKKAFIRASARD AVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVIDRFHNGEIDQKSAQLEIEHFWAGALRRAVIEGDVDSGSLMAGQSV GMVKREEPVAEILAELRGQAVAALTRRAARQAGG
Sequences:
>Translated_354_residues MKDAAMNGWAEERLDELWARGRAFLGCDTAILGGAMAWVSERHLVSAISGAGGFGVIACGSMPSDLLSKEIAATRALLEG MGGERPFGVNLITMHPELDRLIDLCGEHRVSHVVLAGGLPSAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEG AEAGGHIGPVSTSVLAQEILPEVPEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVCATECIAHPNFKKAFIRASARD AVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVIDRFHNGEIDQKSAQLEIEHFWAGALRRAVIEGDVDSGSLMAGQSV GMVKREEPVAEILAELRGQAVAALTRRAARQAGG >Mature_354_residues MKDAAMNGWAEERLDELWARGRAFLGCDTAILGGAMAWVSERHLVSAISGAGGFGVIACGSMPSDLLSKEIAATRALLEG MGGERPFGVNLITMHPELDRLIDLCGEHRVSHVVLAGGLPSAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEG AEAGGHIGPVSTSVLAQEILPEVPEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVCATECIAHPNFKKAFIRASARD AVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVIDRFHNGEIDQKSAQLEIEHFWAGALRRAVIEGDVDSGSLMAGQSV GMVKREEPVAEILAELRGQAVAALTRRAARQAGG
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37386; Mature: 37386
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDAAMNGWAEERLDELWARGRAFLGCDTAILGGAMAWVSERHLVSAISGAGGFGVIACG CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC SMPSDLLSKEIAATRALLEGMGGERPFGVNLITMHPELDRLIDLCGEHRVSHVVLAGGLP CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCC SAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEGAEAGGHIGPVSTSVLAQEIL CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHC PEVPEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVCATECIAHPNFKKAFIRASARD CCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVIDRFHNGEIDQKSAQLEIEHFWAGAL CCCEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RRAVIEGDVDSGSLMAGQSVGMVKREEPVAEILAELRGQAVAALTRRAARQAGG HHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDAAMNGWAEERLDELWARGRAFLGCDTAILGGAMAWVSERHLVSAISGAGGFGVIACG CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC SMPSDLLSKEIAATRALLEGMGGERPFGVNLITMHPELDRLIDLCGEHRVSHVVLAGGLP CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCC SAASIKRVKDLGARCICFAPALALARKLVRSGADALVIEGAEAGGHIGPVSTSVLAQEIL CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHC PEVPEIPIFVAGGIGRGEAILSYLEMGAAGVQIGTRFVCATECIAHPNFKKAFIRASARD CCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AVPTIQIDPQFPVIPVRALANKGTARFMEMQRTVIDRFHNGEIDQKSAQLEIEHFWAGAL CCCEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RRAVIEGDVDSGSLMAGQSVGMVKREEPVAEILAELRGQAVAALTRRAARQAGG HHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA