| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591967
Identifier: 83591967
GI number: 83591967
Start: 746498
End: 747847
Strand: Direct
Name: 83591967
Synonym: Rru_A0628
Alternate gene names: NA
Gene position: 746498-747847 (Clockwise)
Preceding gene: 83591966
Following gene: 83591968
Centisome position: 17.15
GC content: 69.63
Gene sequence:
>1350_bases ATGAGCGCGGTCGTGGCGTCGCCGGGTCTGAGCTGGCTGGGCATCGTTCGCTTAGGGCTGGTCCAGGCGGCGCTGGGCGC CATCGTCGTTCTTGTCACCTCGACCCTGAACCGCATCATGGTGGTCGAGTTGCTGCTGCCCGCCCTGGTTCCCGGGGCCC TGGTCACCTTCCATCAAAGCCTGCAGTTTCTGCGGCCGCGCTGGGGCTGGGGATCGGATCGCCAGGGGCGGCGCACGCCA TGGATCATCGGCGGCATGCTTGTTCTGGCCACCGGCGGCATCCTGGCCGCCGTCGCCACCGCCTGGATCGGCAGCAATCC CACCGCCGGTCTGATCCTTTGCGTTCCCGCCTTCCTGCTGATCGGCATTGGCGTCGGCGCCTGCGGCACCTCGTTGTTGG CGATGGTCGCCGGCGGCGTTGACGATCGTCGGCGCGCTCCGGCGGCGACCATCGTCTGGATGATGATGATCGCCGGTTTC GCCATCACCGCCGGAACCGCCGGGCCTTTCCTTGATCCCTATACGCCGACCCGGCTGGTCGGGCTGACGGCGGTGGTCGC CGGCCTTGCCGTTCTCGTGACCGTGCTTGCCCTTTGGGGGGTGGAGCGCCGCTTGCTGGCCGGAGCCGCCCCGCAGACCG AGCGGGTGAAGGTGCCCTTCCGCGACGCCCTGCGGCTGGTCTGGGGCGAGGGGGAAACCCGCCAGTTCGCCATCTTCATC TTCGTTTCGATGCTGGCCTATAGCGCCCAGGACCTGATTCTTGAACCCTTCGCCGGCGCGGTCTTCGGCCTGACGCCGGG CGAATCGACCAGTCTGGCCGGCATCCAGCATGGCGGGGTGTTCCTGGGCATGTTGATCGTCGGCGTGATGGGGGCCTTGG GCAAGCGATCGATCTTCGGCTCGCTCAAGCTGTGGACCGTCATCGGCTGCCTGACCTCGGCCATGGCCCTGGCGGCCCTG GTGGTGGCGGCGCGGGTTGGCGGCGACTGGCCCCTGCGCGAAACCGTTTTCGCCCTTGGCCTGACCAACGGTCTGTTCGC CATCGCCGCCGTCGGCTCGATGATGGGGCTGGCAGCCAAGGGAACGCCGGGGCGCACCGGCCTGCGCATGGGGTTGTGGG GCGCCGCCCAGGCGATCGCCGGCGGTCTTGGCGGTTTTCTGGGAACGGCGGCGGCCGATCTGGCCCGCGCGCTCTTCGGC TCGCCGGCCGTGGCCTATGCCAGCGTCTTTGGCATCGAGTCGGTGCTGTTCGTCGTTTCGGCGGTGCTGGCGGCGCGGGT TGGCCGGGGGCTGGCGCGGCGCGAGGATGAAAGCGGCGGTCGTCTGCTGCCCCAGTCCGGGCGGCCGTGA
Upstream 100 bases:
>100_bases CCGGCACCACGCTCTATGTCATCGGCATGATGGTCAGCGCCTTTGCTCTCGCCCCGCTGATCGGGGCGGTCGAACTGGCG CCGTTGATCGGGGCGGCCCC
Downstream 100 bases:
>100_bases TGGACGCCGTCGTCGCCACGCAAACGCCGGCCGAGGTCTTCGATGTGGTCGTCGTCGGTGGTGGTCCGGCCGGGGCGACG GCGGCGACCGATCTGGCGCG
Product: PUCC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSAVVASPGLSWLGIVRLGLVQAALGAIVVLVTSTLNRIMVVELLLPALVPGALVTFHQSLQFLRPRWGWGSDRQGRRTP WIIGGMLVLATGGILAAVATAWIGSNPTAGLILCVPAFLLIGIGVGACGTSLLAMVAGGVDDRRRAPAATIVWMMMIAGF AITAGTAGPFLDPYTPTRLVGLTAVVAGLAVLVTVLALWGVERRLLAGAAPQTERVKVPFRDALRLVWGEGETRQFAIFI FVSMLAYSAQDLILEPFAGAVFGLTPGESTSLAGIQHGGVFLGMLIVGVMGALGKRSIFGSLKLWTVIGCLTSAMALAAL VVAARVGGDWPLRETVFALGLTNGLFAIAAVGSMMGLAAKGTPGRTGLRMGLWGAAQAIAGGLGGFLGTAAADLARALFG SPAVAYASVFGIESVLFVVSAVLAARVGRGLARREDESGGRLLPQSGRP
Sequences:
>Translated_449_residues MSAVVASPGLSWLGIVRLGLVQAALGAIVVLVTSTLNRIMVVELLLPALVPGALVTFHQSLQFLRPRWGWGSDRQGRRTP WIIGGMLVLATGGILAAVATAWIGSNPTAGLILCVPAFLLIGIGVGACGTSLLAMVAGGVDDRRRAPAATIVWMMMIAGF AITAGTAGPFLDPYTPTRLVGLTAVVAGLAVLVTVLALWGVERRLLAGAAPQTERVKVPFRDALRLVWGEGETRQFAIFI FVSMLAYSAQDLILEPFAGAVFGLTPGESTSLAGIQHGGVFLGMLIVGVMGALGKRSIFGSLKLWTVIGCLTSAMALAAL VVAARVGGDWPLRETVFALGLTNGLFAIAAVGSMMGLAAKGTPGRTGLRMGLWGAAQAIAGGLGGFLGTAAADLARALFG SPAVAYASVFGIESVLFVVSAVLAARVGRGLARREDESGGRLLPQSGRP >Mature_448_residues SAVVASPGLSWLGIVRLGLVQAALGAIVVLVTSTLNRIMVVELLLPALVPGALVTFHQSLQFLRPRWGWGSDRQGRRTPW IIGGMLVLATGGILAAVATAWIGSNPTAGLILCVPAFLLIGIGVGACGTSLLAMVAGGVDDRRRAPAATIVWMMMIAGFA ITAGTAGPFLDPYTPTRLVGLTAVVAGLAVLVTVLALWGVERRLLAGAAPQTERVKVPFRDALRLVWGEGETRQFAIFIF VSMLAYSAQDLILEPFAGAVFGLTPGESTSLAGIQHGGVFLGMLIVGVMGALGKRSIFGSLKLWTVIGCLTSAMALAALV VAARVGGDWPLRETVFALGLTNGLFAIAAVGSMMGLAAKGTPGRTGLRMGLWGAAQAIAGGLGGFLGTAAADLARALFGS PAVAYASVFGIESVLFVVSAVLAARVGRGLARREDESGGRLLPQSGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 46087; Mature: 45956
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVASPGLSWLGIVRLGLVQAALGAIVVLVTSTLNRIMVVELLLPALVPGALVTFHQS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFLRPRWGWGSDRQGRRTPWIIGGMLVLATGGILAAVATAWIGSNPTAGLILCVPAFLL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHH IGIGVGACGTSLLAMVAGGVDDRRRAPAATIVWMMMIAGFAITAGTAGPFLDPYTPTRLV HHCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH GLTAVVAGLAVLVTVLALWGVERRLLAGAAPQTERVKVPFRDALRLVWGEGETRQFAIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHH FVSMLAYSAQDLILEPFAGAVFGLTPGESTSLAGIQHGGVFLGMLIVGVMGALGKRSIFG HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLKLWTVIGCLTSAMALAALVVAARVGGDWPLRETVFALGLTNGLFAIAAVGSMMGLAAK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTPGRTGLRMGLWGAAQAIAGGLGGFLGTAAADLARALFGSPAVAYASVFGIESVLFVVS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AVLAARVGRGLARREDESGGRLLPQSGRP HHHHHHHHCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SAVVASPGLSWLGIVRLGLVQAALGAIVVLVTSTLNRIMVVELLLPALVPGALVTFHQS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFLRPRWGWGSDRQGRRTPWIIGGMLVLATGGILAAVATAWIGSNPTAGLILCVPAFLL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHH IGIGVGACGTSLLAMVAGGVDDRRRAPAATIVWMMMIAGFAITAGTAGPFLDPYTPTRLV HHCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH GLTAVVAGLAVLVTVLALWGVERRLLAGAAPQTERVKVPFRDALRLVWGEGETRQFAIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHH FVSMLAYSAQDLILEPFAGAVFGLTPGESTSLAGIQHGGVFLGMLIVGVMGALGKRSIFG HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLKLWTVIGCLTSAMALAALVVAARVGGDWPLRETVFALGLTNGLFAIAAVGSMMGLAAK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GTPGRTGLRMGLWGAAQAIAGGLGGFLGTAAADLARALFGSPAVAYASVFGIESVLFVVS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AVLAARVGRGLARREDESGGRLLPQSGRP HHHHHHHHCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA