| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bchP [H]
Identifier: 83591968
GI number: 83591968
Start: 747847
End: 749088
Strand: Direct
Name: bchP [H]
Synonym: Rru_A0629
Alternate gene names: 83591968
Gene position: 747847-749088 (Clockwise)
Preceding gene: 83591967
Following gene: 83591969
Centisome position: 17.18
GC content: 69.65
Gene sequence:
>1242_bases ATGGACGCCGTCGTCGCCACGCAAACGCCGGCCGAGGTCTTCGATGTGGTCGTCGTCGGTGGTGGTCCGGCCGGGGCGAC GGCGGCGACCGATCTGGCGCGGGCCGGTCGGCGTGTCGCCCTGCTTGATCCCGAAGGCCGGCCCAAGCCCTGTGGCGGCG CCATTCCCCCCCGGCTGATGAGCGAATTCGCCATCCCCGATGATCTGCCCTGCGCCCAGGTCAGCGGTGCCCGCGCCCTG GCGCCCTCGGGCCGGGTGGTCGATATGCCGATCACCGGCGCGGTGGTGTCGATGGTCGATCGCGCCGTTTTCGATCCCTG GCTGCGCGCCCGCGCCCATCAGGCCGGCGCCTGCCGCCTGCATGGCCGCTTCGAGGGCTTTGATCGCCAGGAGGACGGCG CGCTGGTGGTGCTTTGGCGCCCCGAGGGGGCGGCGGTGGCCAATAGGATCGTGGCGCGCTATGTGGTTGGCGCCGATGGC GCGCGCTCGAAAGTCGCTGCCCTCGCCGTTGCCGGCGCCGCGCCGCCCTGCGTCGCCGCCTATCACGAAATCATCCGCGC CCCGGCCGCGCCCGCGGCCAGTGCTCCGACACCCGCGACGGCGGCGGGGCCGGCCTATGACCCGGCGCGCTGCGATGTGA TTTATCGCGGCGACATCTCGCCCGATTTCTACGGCTGGATCTTTCCCCATGGCGAGACGTTAAGCATCGGGTCGGGAACG GCGGTCAAAGGCTTCTCGTTGCGCGAGGCTGTCGCCCTGCTGCGCCGGGAAGCCGGATTGGACGGACTGGAGGTGGTGCG GCGCGAAGGCGCTCCCATTCCGTTGCGGCCGCGCAAGCGCTGGGATAACGGCCGCGATGTCGTGCTGATCGGCGATGCCG CCGGGGTGGTCGCCCCGGCTTCGGGCGAGGGGATCTATTACGCCATGGCCAGCGGCAAGATGGCGGCCGAGGCGCTTGGC GAGGCTTTGGCCGGCGCCGGTCCCGCCGCCCTGGCCCAGGTTCGCCGCCGGTTTCTCAAGGCCCATGGCAAGACGTTTTG GTCGCTTGGCCTGCTCCAGCGCTTCTGGTACCGCAGCGACCGCTGGCGCGAGAGTTTCGTTGCCATCTGCGCCGATCGCG ACGTCCAGCGTCTGGTCTGGCAATCCTATCTGACCAAGGATCTGGCGCGCGGCAACATGGGGGCTTACATGCGGATTTTC TTCAAGGATGTCGCCCATCTGATCGGCATCGCCAAGTCTTGA
Upstream 100 bases:
>100_bases TCGTCGTTTCGGCGGTGCTGGCGGCGCGGGTTGGCCGGGGGCTGGCGCGGCGCGAGGATGAAAGCGGCGGTCGTCTGCTG CCCCAGTCCGGGCGGCCGTG
Downstream 100 bases:
>100_bases GGGGACCGCTTCGCGCGGTGTGATGGGACGCGGCGCCCGCTGGGCCGTCGCCCGGGTCCTGGTCTTCGTCCGGCAGCAAG GGAGCGCCGCTGTGGAAAGC
Product: geranylgeranyl reductase
Products: NA
Alternate protein names: Geranylgeranyl reductase [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDAVVATQTPAEVFDVVVVGGGPAGATAATDLARAGRRVALLDPEGRPKPCGGAIPPRLMSEFAIPDDLPCAQVSGARAL APSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGACRLHGRFEGFDRQEDGALVVLWRPEGAAVANRIVARYVVGADG ARSKVAALAVAGAAPPCVAAYHEIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGT AVKGFSLREAVALLRREAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPASGEGIYYAMASGKMAAEALG EALAGAGPAALAQVRRRFLKAHGKTFWSLGLLQRFWYRSDRWRESFVAICADRDVQRLVWQSYLTKDLARGNMGAYMRIF FKDVAHLIGIAKS
Sequences:
>Translated_413_residues MDAVVATQTPAEVFDVVVVGGGPAGATAATDLARAGRRVALLDPEGRPKPCGGAIPPRLMSEFAIPDDLPCAQVSGARAL APSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGACRLHGRFEGFDRQEDGALVVLWRPEGAAVANRIVARYVVGADG ARSKVAALAVAGAAPPCVAAYHEIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGT AVKGFSLREAVALLRREAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPASGEGIYYAMASGKMAAEALG EALAGAGPAALAQVRRRFLKAHGKTFWSLGLLQRFWYRSDRWRESFVAICADRDVQRLVWQSYLTKDLARGNMGAYMRIF FKDVAHLIGIAKS >Mature_413_residues MDAVVATQTPAEVFDVVVVGGGPAGATAATDLARAGRRVALLDPEGRPKPCGGAIPPRLMSEFAIPDDLPCAQVSGARAL APSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGACRLHGRFEGFDRQEDGALVVLWRPEGAAVANRIVARYVVGADG ARSKVAALAVAGAAPPCVAAYHEIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGT AVKGFSLREAVALLRREAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPASGEGIYYAMASGKMAAEALG EALAGAGPAALAQVRRRFLKAHGKTFWSLGLLQRFWYRSDRWRESFVAICADRDVQRLVWQSYLTKDLARGNMGAYMRIF FKDVAHLIGIAKS
Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during bacteriochlorophyll A (BchlA) biosynthesis [H]
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010253 - InterPro: IPR013027 - InterPro: IPR011777 - InterPro: IPR003042 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.3.1.83 [H]
Molecular weight: Translated: 43713; Mature: 43713
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVVATQTPAEVFDVVVVGGGPAGATAATDLARAGRRVALLDPEGRPKPCGGAIPPRLM CCCEECCCCCHHEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH SEFAIPDDLPCAQVSGARALAPSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGACRL HHHCCCCCCCCHHCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HGRFEGFDRQEDGALVVLWRPEGAAVANRIVARYVVGADGARSKVAALAVAGAAPPCVAA ECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCHHHHH YHEIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEECCCCC AVKGFSLREAVALLRREAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPA EECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC SGEGIYYAMASGKMAAEALGEALAGAGPAALAQVRRRFLKAHGKTFWSLGLLQRFWYRSD CCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC RWRESFVAICADRDVQRLVWQSYLTKDLARGNMGAYMRIFFKDVAHLIGIAKS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAVVATQTPAEVFDVVVVGGGPAGATAATDLARAGRRVALLDPEGRPKPCGGAIPPRLM CCCEECCCCCHHEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHH SEFAIPDDLPCAQVSGARALAPSGRVVDMPITGAVVSMVDRAVFDPWLRARAHQAGACRL HHHCCCCCCCCHHCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE HGRFEGFDRQEDGALVVLWRPEGAAVANRIVARYVVGADGARSKVAALAVAGAAPPCVAA ECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCHHHHH YHEIIRAPAAPAASAPTPATAAGPAYDPARCDVIYRGDISPDFYGWIFPHGETLSIGSGT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEECCCCC AVKGFSLREAVALLRREAGLDGLEVVRREGAPIPLRPRKRWDNGRDVVLIGDAAGVVAPA EECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC SGEGIYYAMASGKMAAEALGEALAGAGPAALAQVRRRFLKAHGKTFWSLGLLQRFWYRSD CCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC RWRESFVAICADRDVQRLVWQSYLTKDLARGNMGAYMRIFFKDVAHLIGIAKS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA