| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is phoU [H]
Identifier: 83591941
GI number: 83591941
Start: 715656
End: 716387
Strand: Direct
Name: phoU [H]
Synonym: Rru_A0602
Alternate gene names: 83591941
Gene position: 715656-716387 (Clockwise)
Preceding gene: 83591940
Following gene: 83591942
Centisome position: 16.44
GC content: 61.34
Gene sequence:
>732_bases ATGTCGACCGAGCACACCGTCCGGTCCTTCGACGAAGAACTCAAAACACTCGTCAAGACCGTGCTGCGCATGGGCGGGCT GGCCGAAGCCCAGCTTGCCAATGCGGTTCAGGCCCTGGTCCGGCGCGATAGCGATCTCGCCGGGCGGGTGGTTTCCGGCG ATGGCCGCATCGACGCCATCGAACAGGAGATCAATGATTTCGCCATCCGCATGCTGGCCCTGCGCCAGCCGATGGCCGAC GATCTGCGCGGCATCGTCGGCGCCTTGAAGATCTCCAGCGATCTGGAGCGGATCGGCGATTACGCCTCGAACGTTGGGAA GCGCACCCTTGTGCTGAACCAACTGGCGCCGGTCAAACCGGTCACGACCATTCCGACCATGGCCCGTCTGGTCCAGGACA TGGTCAAGGATACGCTTGACGCCTATGTCGAGCGCGATCTCGACAAGGCGGTGATGGCCTGGTCGCGCGATGACGAGGTC GACGAGCTTTACACCTCGCTGTTTCGCGAACTCGTCACCTACATGATGGAGGATCCGCGCACCATCACCGCTTGTACCCA CCTGATGTTCATCGCCAAGAACATCGAACGGATCGGCGATCACGCCACCAATATCGCCGAGACCGTGCATTACCTGGTTT CGGGAAATCCGCTACGCGCCGCCCGCCCCAAAGGAAGCGGTCAGGGCGAGTTCGGGGACACCCTTGATGACATTCAAGAG CTGAACCGATGA
Upstream 100 bases:
>100_bases TGACCCAGGGTTATATCACCGGCCGCTTCGGCTGATCCCCCGCCGGCCCCTCCCTTGCCGGGGAGCGGGTTGTTTTCGGT GGCCGGTAGGAGAAATACGG
Downstream 100 bases:
>100_bases AATCCCATGTGCTGATCGTTGAAGACGAAGTCTCGCTGGTGACCTTGCTGCGCTATAACCTTGAGAAAGAGGGTTACCGG GTGTCCGAGGCGATGGATGG
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSTEHTVRSFDEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAIEQEINDFAIRMLALRQPMAD DLRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKPVTTIPTMARLVQDMVKDTLDAYVERDLDKAVMAWSRDDEV DELYTSLFRELVTYMMEDPRTITACTHLMFIAKNIERIGDHATNIAETVHYLVSGNPLRAARPKGSGQGEFGDTLDDIQE LNR
Sequences:
>Translated_243_residues MSTEHTVRSFDEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAIEQEINDFAIRMLALRQPMAD DLRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKPVTTIPTMARLVQDMVKDTLDAYVERDLDKAVMAWSRDDEV DELYTSLFRELVTYMMEDPRTITACTHLMFIAKNIERIGDHATNIAETVHYLVSGNPLRAARPKGSGQGEFGDTLDDIQE LNR >Mature_242_residues STEHTVRSFDEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAIEQEINDFAIRMLALRQPMADD LRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKPVTTIPTMARLVQDMVKDTLDAYVERDLDKAVMAWSRDDEVD ELYTSLFRELVTYMMEDPRTITACTHLMFIAKNIERIGDHATNIAETVHYLVSGNPLRAARPKGSGQGEFGDTLDDIQEL NR
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=219, Percent_Identity=38.3561643835616, Blast_Score=161, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 27004; Mature: 26873
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEHTVRSFDEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAI CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCEEECCCCCHHHH EQEINDFAIRMLALRQPMADDLRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC VTTIPTMARLVQDMVKDTLDAYVERDLDKAVMAWSRDDEVDELYTSLFRELVTYMMEDPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH TITACTHLMFIAKNIERIGDHATNIAETVHYLVSGNPLRAARPKGSGQGEFGDTLDDIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH LNR HCC >Mature Secondary Structure STEHTVRSFDEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAI CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCEEECCCCCHHHH EQEINDFAIRMLALRQPMADDLRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC VTTIPTMARLVQDMVKDTLDAYVERDLDKAVMAWSRDDEVDELYTSLFRELVTYMMEDPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH TITACTHLMFIAKNIERIGDHATNIAETVHYLVSGNPLRAARPKGSGQGEFGDTLDDIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH LNR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]