Click here to switch to the map view.

The map label for this gene is cbbT [H]

Identifier: 83591934

GI number: 83591934

Start: 706239

End: 708221

Strand: Direct

Name: cbbT [H]

Synonym: Rru_A0595

Alternate gene names: 83591934

Gene position: 706239-708221 (Clockwise)

Preceding gene: 83591933

Following gene: 83591935

Centisome position: 16.22

GC content: 69.99

Gene sequence:

>1983_bases
ATGTCCGCCGTCCCCCACGCCGATCTCGCCAACGCCATCCGCTTTCTGTCCGCCGATGCGGTTCAAAAGGCCAAATCCGG
CCACCCCGGCATGCCCATGGGCATGGCCGATGTGGCGACGGTTCTGTTCACCCGGTTCCTGACCTTTGATCCGGCGGCGC
CGCGCTGGCCCGACCGCGACCGCTTCGTGCTGTCGGCCGGCCATGGCTCGATGCTGCTCTACAGCCTGCTTTACCTCACC
GGCTATGCCGATATCGATCTTGATCAGATCAAGTCGTTCCGCCAGCTTGGCGCGCGTACCGCCGGCCACCCGGAATACGG
CCATGTGGCCGGCGCCGAGACCACCACCGGGCCGCTGGGCCAGGGGCTGGCCAACGCCGTGGGCATGGCCCTGGCCGAGC
GCATGACCGCCGCCCGCTTCGGCGAGGCCGTGGTCAACCACCGCACCTATGTGATCGCCGGCGACGGCTGCCTGATGGAA
GGCATCAGCCAGGAGGCCATCTCGCTGGCCGGGCACATGAAGCTCGAACGGCTGATCGTGTTGTGGGACGACAACCGCAT
CTGCATCGACGGCGATGTCGGTCTGGCGTCGAGCGACGACGTTCCCGCCCGCTTCCAGGCCAGCGGCTGGCGCACCCTGG
CCTGCGACGGCCATGACCCCCAGGATATTACCCGGGCCCTGACCGAGGCCCAGACCTCGGACCGGCCGACGCTGATCGCC
TGCCGCACCATCATCGGCAAGGGCGCGCCCACCCTTCAGGGCACCGCCAAGACCCATGGCTCGCCGCTGGGCGATGCCGA
GATCGCCGGCGCCCGCGCCGCGCTCGGCTGGCCCCATGCCCCCTTCGAGGTGCCCGAGCCCATCTTGTCGGCTTGGCGGA
CCGCCGGCGCCCGCGGCGGGGTTGCCCGCGTTGCCTGGGAAGACCGTCTGGCCTCGCTGCCCGGCGACGAGCGCGCCACC
CTCATCCGCGCCCTGGCCGGTGATCTGCCGGCGGGCTGGGAAGACGCCGTCCTCGCCGCCAAGCGCGCCCTGATCGAGAC
CCGGCCCAAGGTCGCCTCGCGCAAGGCCTCGCAGATGGCGCTCGAGGTTCTGGTGCCGCAGATCCCCGAACTGGTCGGCG
GCTCGGCCGACTTGACGGGCTCCAACCTCACCCAGGTCAAGGGTCAGGCCGATATCCTGCCCGGCTCCTATGGCGGCCAT
TACATCCACTATGGCGTGCGCGAGCATGGCATGGGCTCGCTGATGAACGGTTTGGCCCTGCATGGCGGGGTCATCCCCTA
TGGCGGCACCTTCCTGGTCTTCGCCGATTACATGCGCCCGGCCATCCGCATGGCCGCCCTGATGGGCCTGCGCGCCATTT
ATGTGCTGACCCATGATTCCATCGGTCTGGGCGAAGACGGCCCGACCCATCAGCCGGTCGAGCATCTGGCCTCGTTGCGC
GCCATTCCCAACCTGTGGACCTTCCGCCCGGCCGATGCGGTGGAAACCCTGGAATGCTGGGCCCTGGCCGTCGGTCGCAG
CGATGGCCCGAGCCTGCTCGCCCTGTCGCGTCAGGATCTGCCGACCCTGCGCGAGGCCTATGGCGAGGAAAACCTCTCGG
CCAAGGGCGCCTATGTCGTGGCCGGCGAGGGGCCGCGCGACGTCACCCTGATCGCCACCGGCTCGGAAGTGACCATCGCC
ATGGCGGCGCGCGAGCTGCTGGCCGCCGATGGCCTGGCCGCCGCCGTCGTCTCCATGCCGAGTTGGGAGCTGTTCGAGGC
CCAGTCGGCCGAGTACCGCGAGGCGGTGCTGGGCCCGCGCGCCCGCCGGGTGGCGGTCGAAGCCGCCTCGGCCTTCGGCT
GGGAGCGGTGGGTTGAAGACAAGACCGCCGTGGTCGGCATGCCGGGCTTCGGTGCCTCGGGTCCGATCGGCGATCTTTAT
GAGCACTTCGGCATCACCGCCGAAGCCGTCGCCCGCGTCGCCAAGGCCCGGGCCGAGGGCTGA

Upstream 100 bases:

>100_bases
TTGCTTTTACGGGCGTTTTGGCTCACAACCCGCTTAAGCCGCGCGCGGCCGGAATGTCCTCTCGAACGCGGTGCCCCTGA
TCGATATGAGGTTTCCGCCC

Downstream 100 bases:

>100_bases
CATCGCGATGGTGGCGCGGCCGGGCTTTCGTTTTAAGGGCTCGGTCGCGCCGCGCGGACGCTGTATCGTTCGGCAGAGTG
CCGGGAACCGGTTTCATAGG

Product: transketolase

Products: NA

Alternate protein names: TK [H]

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MSAVPHADLANAIRFLSADAVQKAKSGHPGMPMGMADVATVLFTRFLTFDPAAPRWPDRDRFVLSAGHGSMLLYSLLYLT
GYADIDLDQIKSFRQLGARTAGHPEYGHVAGAETTTGPLGQGLANAVGMALAERMTAARFGEAVVNHRTYVIAGDGCLME
GISQEAISLAGHMKLERLIVLWDDNRICIDGDVGLASSDDVPARFQASGWRTLACDGHDPQDITRALTEAQTSDRPTLIA
CRTIIGKGAPTLQGTAKTHGSPLGDAEIAGARAALGWPHAPFEVPEPILSAWRTAGARGGVARVAWEDRLASLPGDERAT
LIRALAGDLPAGWEDAVLAAKRALIETRPKVASRKASQMALEVLVPQIPELVGGSADLTGSNLTQVKGQADILPGSYGGH
YIHYGVREHGMGSLMNGLALHGGVIPYGGTFLVFADYMRPAIRMAALMGLRAIYVLTHDSIGLGEDGPTHQPVEHLASLR
AIPNLWTFRPADAVETLECWALAVGRSDGPSLLALSRQDLPTLREAYGEENLSAKGAYVVAGEGPRDVTLIATGSEVTIA
MAARELLAADGLAAAVVSMPSWELFEAQSAEYREAVLGPRARRVAVEAASAFGWERWVEDKTAVVGMPGFGASGPIGDLY
EHFGITAEAVARVAKARAEG

Sequences:

>Translated_660_residues
MSAVPHADLANAIRFLSADAVQKAKSGHPGMPMGMADVATVLFTRFLTFDPAAPRWPDRDRFVLSAGHGSMLLYSLLYLT
GYADIDLDQIKSFRQLGARTAGHPEYGHVAGAETTTGPLGQGLANAVGMALAERMTAARFGEAVVNHRTYVIAGDGCLME
GISQEAISLAGHMKLERLIVLWDDNRICIDGDVGLASSDDVPARFQASGWRTLACDGHDPQDITRALTEAQTSDRPTLIA
CRTIIGKGAPTLQGTAKTHGSPLGDAEIAGARAALGWPHAPFEVPEPILSAWRTAGARGGVARVAWEDRLASLPGDERAT
LIRALAGDLPAGWEDAVLAAKRALIETRPKVASRKASQMALEVLVPQIPELVGGSADLTGSNLTQVKGQADILPGSYGGH
YIHYGVREHGMGSLMNGLALHGGVIPYGGTFLVFADYMRPAIRMAALMGLRAIYVLTHDSIGLGEDGPTHQPVEHLASLR
AIPNLWTFRPADAVETLECWALAVGRSDGPSLLALSRQDLPTLREAYGEENLSAKGAYVVAGEGPRDVTLIATGSEVTIA
MAARELLAADGLAAAVVSMPSWELFEAQSAEYREAVLGPRARRVAVEAASAFGWERWVEDKTAVVGMPGFGASGPIGDLY
EHFGITAEAVARVAKARAEG
>Mature_659_residues
SAVPHADLANAIRFLSADAVQKAKSGHPGMPMGMADVATVLFTRFLTFDPAAPRWPDRDRFVLSAGHGSMLLYSLLYLTG
YADIDLDQIKSFRQLGARTAGHPEYGHVAGAETTTGPLGQGLANAVGMALAERMTAARFGEAVVNHRTYVIAGDGCLMEG
ISQEAISLAGHMKLERLIVLWDDNRICIDGDVGLASSDDVPARFQASGWRTLACDGHDPQDITRALTEAQTSDRPTLIAC
RTIIGKGAPTLQGTAKTHGSPLGDAEIAGARAALGWPHAPFEVPEPILSAWRTAGARGGVARVAWEDRLASLPGDERATL
IRALAGDLPAGWEDAVLAAKRALIETRPKVASRKASQMALEVLVPQIPELVGGSADLTGSNLTQVKGQADILPGSYGGHY
IHYGVREHGMGSLMNGLALHGGVIPYGGTFLVFADYMRPAIRMAALMGLRAIYVLTHDSIGLGEDGPTHQPVEHLASLRA
IPNLWTFRPADAVETLECWALAVGRSDGPSLLALSRQDLPTLREAYGEENLSAKGAYVVAGEGPRDVTLIATGSEVTIAM
AARELLAADGLAAAVVSMPSWELFEAQSAEYREAVLGPRARRVAVEAASAFGWERWVEDKTAVVGMPGFGASGPIGDLYE
HFGITAEAVARVAKARAEG

Specific function: Unknown

COG id: COG0021

COG function: function code G; Transketolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transketolase family [H]

Homologues:

Organism=Homo sapiens, GI205277463, Length=661, Percent_Identity=26.1724659606657, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI4507521, Length=661, Percent_Identity=26.1724659606657, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI133778974, Length=573, Percent_Identity=26.1780104712042, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI225637459, Length=584, Percent_Identity=24.3150684931507, Blast_Score=126, Evalue=8e-29,
Organism=Homo sapiens, GI225637461, Length=555, Percent_Identity=23.7837837837838, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI225637463, Length=552, Percent_Identity=24.0942028985507, Blast_Score=111, Evalue=2e-24,
Organism=Escherichia coli, GI48994911, Length=664, Percent_Identity=53.1626506024096, Blast_Score=641, Evalue=0.0,
Organism=Escherichia coli, GI1788808, Length=660, Percent_Identity=52.4242424242424, Blast_Score=634, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17539652, Length=575, Percent_Identity=27.6521739130435, Blast_Score=171, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6325331, Length=664, Percent_Identity=43.3734939759036, Blast_Score=503, Evalue=1e-143,
Organism=Saccharomyces cerevisiae, GI6319593, Length=667, Percent_Identity=43.1784107946027, Blast_Score=489, Evalue=1e-139,
Organism=Drosophila melanogaster, GI45551847, Length=662, Percent_Identity=27.9456193353474, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI45550715, Length=662, Percent_Identity=27.9456193353474, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24666278, Length=574, Percent_Identity=27.0034843205575, Blast_Score=179, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24645119, Length=630, Percent_Identity=27.3015873015873, Blast_Score=156, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005475
- InterPro:   IPR005478
- InterPro:   IPR020826
- InterPro:   IPR005476
- InterPro:   IPR005474 [H]

Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]

EC number: =2.2.1.1 [H]

Molecular weight: Translated: 69774; Mature: 69643

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVPHADLANAIRFLSADAVQKAKSGHPGMPMGMADVATVLFTRFLTFDPAAPRWPDRD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
RFVLSAGHGSMLLYSLLYLTGYADIDLDQIKSFRQLGARTAGHPEYGHVAGAETTTGPLG
CEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
QGLANAVGMALAERMTAARFGEAVVNHRTYVIAGDGCLMEGISQEAISLAGHMKLERLIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEEE
LWDDNRICIDGDVGLASSDDVPARFQASGWRTLACDGHDPQDITRALTEAQTSDRPTLIA
EECCCEEEEECCCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
CRTIIGKGAPTLQGTAKTHGSPLGDAEIAGARAALGWPHAPFEVPEPILSAWRTAGARGG
HHHHHCCCCCCCCCCHHCCCCCCCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
VARVAWEDRLASLPGDERATLIRALAGDLPAGWEDAVLAAKRALIETRPKVASRKASQMA
EEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LEVLVPQIPELVGGSADLTGSNLTQVKGQADILPGSYGGHYIHYGVREHGMGSLMNGLAL
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEECHHHCCHHHHHHHHHH
HGGVIPYGGTFLVFADYMRPAIRMAALMGLRAIYVLTHDSIGLGEDGPTHQPVEHLASLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHH
AIPNLWTFRPADAVETLECWALAVGRSDGPSLLALSRQDLPTLREAYGEENLSAKGAYVV
HCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCEEE
AGEGPRDVTLIATGSEVTIAMAARELLAADGLAAAVVSMPSWELFEAQSAEYREAVLGPR
ECCCCCCEEEEEECCCEEHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCHHHHHHHHCCH
ARRVAVEAASAFGWERWVEDKTAVVGMPGFGASGPIGDLYEHFGITAEAVARVAKARAEG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAVPHADLANAIRFLSADAVQKAKSGHPGMPMGMADVATVLFTRFLTFDPAAPRWPDRD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
RFVLSAGHGSMLLYSLLYLTGYADIDLDQIKSFRQLGARTAGHPEYGHVAGAETTTGPLG
CEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
QGLANAVGMALAERMTAARFGEAVVNHRTYVIAGDGCLMEGISQEAISLAGHMKLERLIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEEE
LWDDNRICIDGDVGLASSDDVPARFQASGWRTLACDGHDPQDITRALTEAQTSDRPTLIA
EECCCEEEEECCCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
CRTIIGKGAPTLQGTAKTHGSPLGDAEIAGARAALGWPHAPFEVPEPILSAWRTAGARGG
HHHHHCCCCCCCCCCHHCCCCCCCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
VARVAWEDRLASLPGDERATLIRALAGDLPAGWEDAVLAAKRALIETRPKVASRKASQMA
EEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LEVLVPQIPELVGGSADLTGSNLTQVKGQADILPGSYGGHYIHYGVREHGMGSLMNGLAL
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEECHHHCCHHHHHHHHHH
HGGVIPYGGTFLVFADYMRPAIRMAALMGLRAIYVLTHDSIGLGEDGPTHQPVEHLASLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHH
AIPNLWTFRPADAVETLECWALAVGRSDGPSLLALSRQDLPTLREAYGEENLSAKGAYVV
HCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCEEE
AGEGPRDVTLIATGSEVTIAMAARELLAADGLAAAVVSMPSWELFEAQSAEYREAVLGPR
ECCCCCCEEEEEECCCEEHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCHHHHHHHHCCH
ARRVAVEAASAFGWERWVEDKTAVVGMPGFGASGPIGDLYEHFGITAEAVARVAKARAEG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA