| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is osmC [H]
Identifier: 83591919
GI number: 83591919
Start: 689394
End: 689828
Strand: Direct
Name: osmC [H]
Synonym: Rru_A0580
Alternate gene names: 83591919
Gene position: 689394-689828 (Clockwise)
Preceding gene: 83591918
Following gene: 83591920
Centisome position: 15.84
GC content: 63.22
Gene sequence:
>435_bases ATGATCAAGAAGACCGCCAGCGTTCATTGGGAAGGCCAGGGCAAGCACGGCCAGGGTCAGATCAGCACGGAAACCGGGGC GCTGACGAATTATCCCTATGGCTTCGCCAGCCGCTTCGAGGACGATCGCCAGGGCACCAACCCCGAGGAGATCCTGGGCG CCGCCCATGCCGCCTGTTTCACCATGGCGTTTTCCTTCGCCTGCGATAAGGCCGGTCTGGCCACCACCCATGTCGATACC ACCGCCAGTGTCGCCCTGGCCAAACAGGGCGAGGGTTTCGTCATCGAGCGTATCGATCTGACGCTGTCGGCCAGCGTGCC GGGCATCGACGACGCGACCTTCCAGGCGATCGCGGCGACCGCCAAGGCCGAATGCCCGCTGTCGAAGGCTTTGGCCGCCG TCCCCGAGATCACTTTGAAGGCGACATTGATCTAA
Upstream 100 bases:
>100_bases GCCCCTTAAGCGGTTCTTATAGGAGCCGAAGGGCCTTGACCGGCGGCCGCCCCCCTGGTGTCCGCCCCCTGTCAAGGTCC GATCACCGAGGAGCGAGACC
Downstream 100 bases:
>100_bases GCGACCCCCAGGTCCATTTTTTGACGGGCACACCGTGGTCGGCCATCGTGCCACCACAGTGTGCCCGAATGCTTTTGCCG GTGGGGTGGGAAAGGCCGCT
Product: OsmC-like protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIKKTASVHWEGQGKHGQGQISTETGALTNYPYGFASRFEDDRQGTNPEEILGAAHAACFTMAFSFACDKAGLATTHVDT TASVALAKQGEGFVIERIDLTLSASVPGIDDATFQAIAATAKAECPLSKALAAVPEITLKATLI
Sequences:
>Translated_144_residues MIKKTASVHWEGQGKHGQGQISTETGALTNYPYGFASRFEDDRQGTNPEEILGAAHAACFTMAFSFACDKAGLATTHVDT TASVALAKQGEGFVIERIDLTLSASVPGIDDATFQAIAATAKAECPLSKALAAVPEITLKATLI >Mature_144_residues MIKKTASVHWEGQGKHGQGQISTETGALTNYPYGFASRFEDDRQGTNPEEILGAAHAACFTMAFSFACDKAGLATTHVDT TASVALAKQGEGFVIERIDLTLSASVPGIDDATFQAIAATAKAECPLSKALAAVPEITLKATLI
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=142, Percent_Identity=52.112676056338, Blast_Score=142, Evalue=7e-36,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 15045; Mature: 15045
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKTASVHWEGQGKHGQGQISTETGALTNYPYGFASRFEDDRQGTNPEEILGAAHAACF CCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH TMAFSFACDKAGLATTHVDTTASVALAKQGEGFVIERIDLTLSASVPGIDDATFQAIAAT HHHHHHHCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHHHH AKAECPLSKALAAVPEITLKATLI CCCCCCHHHHHHHCCCEEEEEEEC >Mature Secondary Structure MIKKTASVHWEGQGKHGQGQISTETGALTNYPYGFASRFEDDRQGTNPEEILGAAHAACF CCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH TMAFSFACDKAGLATTHVDTTASVALAKQGEGFVIERIDLTLSASVPGIDDATFQAIAAT HHHHHHHCCCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHHHH AKAECPLSKALAAVPEITLKATLI CCCCCCHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]