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The map label for this gene is lumQ [H]

Identifier: 83591875

GI number: 83591875

Start: 631118

End: 632032

Strand: Direct

Name: lumQ [H]

Synonym: Rru_A0536

Alternate gene names: 83591875

Gene position: 631118-632032 (Clockwise)

Preceding gene: 83591873

Following gene: 83591876

Centisome position: 14.5

GC content: 67.21

Gene sequence:

>915_bases
ATGGCCGATCTGGACGACTTCAAGATTTTTGAGCATCTGCACAGCGCCGGCGTTCCGCTGCGGGCTTCGGCGCGCTTTGG
CGACGGCGTGGCCGCCGCCTTATGGGAGCGCGACGAGCATGTGTTTCAGCGCTACGAAACCCCCGACCACCATACGCTGA
GCCTTTATGTCGACGGTGGAACCGGGATTCGCCGCTTGGCGGGCGAGCGCTTGCGCATTGGCGATCACGCCGGCCCGGGC
AGCCTGTGCGTCATGCCCGCCGAGGTGACGTCGGACTGGTCGGTCGACGGTCCGGTCCGCCTGTTTCATTTTTATATCCC
GCGCGTCGTCTTCAACCGGGCGGTGGTTGAAACCCTGGATCTCGATCCCGCCCGGGTCAGCCTGCGCGATGAAAGCTTCC
TGCGCGACCCGGTGCTTGAAGGCATGATCCGCTCGGCGATGCTGGCGCTGTCGTGGAACGATCCGGCCGAGCGGGTGGCG
CTGACCCATGCCGGGCGGGCGCTGATCGCCTATATGGCGGCGCGGCTGACCGATCGCGGGGCGCGGGCCTTGCCGGCGAT
GGGCGGGCTGACGCCCCGGGTGGTCGCCCGCCTGCGCGCCTTCATCGAAGCCAATCTCGAGCGGGCGCTGAGCATCGACG
ATCTGGCCGCGGTGGCCGATCTCAGCCCCTTCCACTTCGCCCGCGCCTTCAAGGCCACCCTGGGCGAGCCGCCCCATGCC
TATGTGCAAAGCCGGCGGATCGAGCGCGCCAAGACCCTTCTGCGCGCCGATCGCCTGCCTTTGGCCGAAATCGCCCTGCT
TTGCGGCTTTGCCAGCCAAAGCCACTTCACCGCCCGCTTCCGCCAAGCCACCGGCCAGACGCCCGGGCGTTACGCCCGGG
AGGGCGGTGGTCTGGTTTCTGATGTATTTCTTTAA

Upstream 100 bases:

>100_bases
CGCCCTGGTCTGTCACCGCCTTGCTTGGCGTATCGCGGCCTTGCGGCAAGGCGATCCAAAGTGCTTAGCTGGGTTTTCGT
TCGAGCCTGAGGCGCGGGTC

Downstream 100 bases:

>100_bases
AATCAAGGGATTAGAGAGAGGGTGGCGCGGAAAACCGGTATCTGCTTTTCTAAGAACCCGATCTTTGGGCCCTTCGTCAT
GATACCATGGCGCCTGTAGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MADLDDFKIFEHLHSAGVPLRASARFGDGVAAALWERDEHVFQRYETPDHHTLSLYVDGGTGIRRLAGERLRIGDHAGPG
SLCVMPAEVTSDWSVDGPVRLFHFYIPRVVFNRAVVETLDLDPARVSLRDESFLRDPVLEGMIRSAMLALSWNDPAERVA
LTHAGRALIAYMAARLTDRGARALPAMGGLTPRVVARLRAFIEANLERALSIDDLAAVADLSPFHFARAFKATLGEPPHA
YVQSRRIERAKTLLRADRLPLAEIALLCGFASQSHFTARFRQATGQTPGRYAREGGGLVSDVFL

Sequences:

>Translated_304_residues
MADLDDFKIFEHLHSAGVPLRASARFGDGVAAALWERDEHVFQRYETPDHHTLSLYVDGGTGIRRLAGERLRIGDHAGPG
SLCVMPAEVTSDWSVDGPVRLFHFYIPRVVFNRAVVETLDLDPARVSLRDESFLRDPVLEGMIRSAMLALSWNDPAERVA
LTHAGRALIAYMAARLTDRGARALPAMGGLTPRVVARLRAFIEANLERALSIDDLAAVADLSPFHFARAFKATLGEPPHA
YVQSRRIERAKTLLRADRLPLAEIALLCGFASQSHFTARFRQATGQTPGRYAREGGGLVSDVFL
>Mature_303_residues
ADLDDFKIFEHLHSAGVPLRASARFGDGVAAALWERDEHVFQRYETPDHHTLSLYVDGGTGIRRLAGERLRIGDHAGPGS
LCVMPAEVTSDWSVDGPVRLFHFYIPRVVFNRAVVETLDLDPARVSLRDESFLRDPVLEGMIRSAMLALSWNDPAERVAL
THAGRALIAYMAARLTDRGARALPAMGGLTPRVVARLRAFIEANLERALSIDDLAAVADLSPFHFARAFKATLGEPPHAY
VQSRRIERAKTLLRADRLPLAEIALLCGFASQSHFTARFRQATGQTPGRYAREGGGLVSDVFL

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790857, Length=100, Percent_Identity=36, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 33491; Mature: 33359

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLDDFKIFEHLHSAGVPLRASARFGDGVAAALWERDEHVFQRYETPDHHTLSLYVDGG
CCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
TGIRRLAGERLRIGDHAGPGSLCVMPAEVTSDWSVDGPVRLFHFYIPRVVFNRAVVETLD
CHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
LDPARVSLRDESFLRDPVLEGMIRSAMLALSWNDPAERVALTHAGRALIAYMAARLTDRG
CCCCEEEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARALPAMGGLTPRVVARLRAFIEANLERALSIDDLAAVADLSPFHFARAFKATLGEPPHA
CHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
YVQSRRIERAKTLLRADRLPLAEIALLCGFASQSHFTARFRQATGQTPGRYAREGGGLVS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHH
DVFL
HHCC
>Mature Secondary Structure 
ADLDDFKIFEHLHSAGVPLRASARFGDGVAAALWERDEHVFQRYETPDHHTLSLYVDGG
CCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
TGIRRLAGERLRIGDHAGPGSLCVMPAEVTSDWSVDGPVRLFHFYIPRVVFNRAVVETLD
CHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
LDPARVSLRDESFLRDPVLEGMIRSAMLALSWNDPAERVALTHAGRALIAYMAARLTDRG
CCCCEEEECCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ARALPAMGGLTPRVVARLRAFIEANLERALSIDDLAAVADLSPFHFARAFKATLGEPPHA
CHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
YVQSRRIERAKTLLRADRLPLAEIALLCGFASQSHFTARFRQATGQTPGRYAREGGGLVS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCHH
DVFL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]