| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591873
Identifier: 83591873
GI number: 83591873
Start: 629431
End: 629958
Strand: Direct
Name: 83591873
Synonym: Rru_A0534
Alternate gene names: NA
Gene position: 629431-629958 (Clockwise)
Preceding gene: 83591866
Following gene: 83591875
Centisome position: 14.46
GC content: 66.1
Gene sequence:
>528_bases ATGACTTTACGCGATCTGCCTCGCCTCGTGCGGCGCGATTTGTTAACGCCCGTTACCGCCATCTTGTTCCTGGTGATCGC CATCAGCGGAATAATGTTGTTTTGGCATCAGGGCGAACACCTCGTGAAGGATGCCCACGAATGGCTGGGTATGGGGTTTA TCGGTGTAGCCTGCTGGCATCTCTGGACCCATCGCAAGTCCGTCGCCGCCGCCCTCAAGCGCCCTTTGCCGCGCTGGGGA TTCGCCGGGGCCACGGCTTTGGCCGTGGTCGTGGTGATGGCCACGGCCTCGACCGATGGCAAACAGGGCTCGCCCAAGGC GCTGATCGGCTCGCTGATGGCCGCCCCCCTGCCGGTGGTCGCCCAGGTGGTGGGCGCCGATCCGCAGGTTCTGGTCAATG CCCTGGAGGCGCGCGGCTGGCGACTGCCGTCGTCCCAGGCCACCGCCTTGGAGATCGCCAGCTTGTCGGGGGGCTCGCCG ATGGCGGTGCTGGCGGTCGCCCAGGGCTTGGTTCAGCCCACTCCCTGA
Upstream 100 bases:
>100_bases GAATCATGACGGATTGGTAAATTGAGATATATCCGCCATGGACTTAAGGTCTTTTTACGGCGGCGATGAGCAGCCCTCCC CAAGATAAGGACCCGGTCCG
Downstream 100 bases:
>100_bases GGTTACGGGCTGAGGTTACGGGCCCTGAGGCGGTGGGCGGCCCACCCCCCCGCCTTTACGGTGTCCTCTTTCTGTCGTTT CCTTTACGCCGCCAAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTLRDLPRLVRRDLLTPVTAILFLVIAISGIMLFWHQGEHLVKDAHEWLGMGFIGVACWHLWTHRKSVAAALKRPLPRWG FAGATALAVVVVMATASTDGKQGSPKALIGSLMAAPLPVVAQVVGADPQVLVNALEARGWRLPSSQATALEIASLSGGSP MAVLAVAQGLVQPTP
Sequences:
>Translated_175_residues MTLRDLPRLVRRDLLTPVTAILFLVIAISGIMLFWHQGEHLVKDAHEWLGMGFIGVACWHLWTHRKSVAAALKRPLPRWG FAGATALAVVVVMATASTDGKQGSPKALIGSLMAAPLPVVAQVVGADPQVLVNALEARGWRLPSSQATALEIASLSGGSP MAVLAVAQGLVQPTP >Mature_174_residues TLRDLPRLVRRDLLTPVTAILFLVIAISGIMLFWHQGEHLVKDAHEWLGMGFIGVACWHLWTHRKSVAAALKRPLPRWGF AGATALAVVVVMATASTDGKQGSPKALIGSLMAAPLPVVAQVVGADPQVLVNALEARGWRLPSSQATALEIASLSGGSPM AVLAVAQGLVQPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18491; Mature: 18360
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRDLPRLVRRDLLTPVTAILFLVIAISGIMLFWHQGEHLVKDAHEWLGMGFIGVACWH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH LWTHRKSVAAALKRPLPRWGFAGATALAVVVVMATASTDGKQGSPKALIGSLMAAPLPVV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH AQVVGADPQVLVNALEARGWRLPSSQATALEIASLSGGSPMAVLAVAQGLVQPTP HHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TLRDLPRLVRRDLLTPVTAILFLVIAISGIMLFWHQGEHLVKDAHEWLGMGFIGVACWH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH LWTHRKSVAAALKRPLPRWGFAGATALAVVVVMATASTDGKQGSPKALIGSLMAAPLPVV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH AQVVGADPQVLVNALEARGWRLPSSQATALEIASLSGGSPMAVLAVAQGLVQPTP HHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA