| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is crp [C]
Identifier: 83591836
GI number: 83591836
Start: 581834
End: 582223
Strand: Direct
Name: crp [C]
Synonym: Rru_A0496
Alternate gene names: 83591836
Gene position: 581834-582223 (Clockwise)
Preceding gene: 83591835
Following gene: 83591842
Centisome position: 13.37
GC content: 66.67
Gene sequence:
>390_bases TTGTCCCAATCCGAAGGGGTCCAGGTTCCCGGGCCCAATCGCGCCGAATTTCCCGAAGGCGCCGTGGTGTTTCGCGAAGG CGACGCCGCCGATGGCGTCTATCTGGTTGAATCGGGCCTTGTCGACATGATCGTCCGCCGCCCCGACGGTAGCGAAGCGG TGATCGGAACCGTCGGCGCCGGAGAGGTCTTTGGCGAAATGGCGCTGATCGATGGTCATCCGCGCATGGCGACGGCGCGG GTGGCGATGGAGGCGACCCTGGTGCGCGTCTCCAACGAGGCCTTCCGCGCCCAGTTGAAATCGGCCAGCCCGGTGATCGC CCGCGTCATGCGCCAGATGGCCCATCGCTTGCGCACCCTGGCCCAGGACATGGCCAACCGCGCCGAATAG
Upstream 100 bases:
>100_bases GGGCCCCTTTAACCCGGAGGCCTTATTTTAGAGCGGCGATGGCGCGGAAAACCGCTATCCTCTTTTCGCCTGCCGCTCCC GCAAGCCCGGAGGTCGAGTC
Downstream 100 bases:
>100_bases GCGCCCAAAGCCAGAACGCGACGACGATGTGCTGGCCTCTCAGGTCTATGCCTCGTCGGCGAGCACTAGAACATCATCGG GACCGAACCACAGAGTCAGC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Crp Family Transcriptional Regulator; Cyclic AMP Receptor Protein; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Alpha-Beta Hydrolase Family Esterase; MscS Mechanosensitive Ion Channel; CheY-Like Receiver; Catabolite Gene Activator; Signal Transduction Protein; Diguanylate Phosphodiesterase
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSQSEGVQVPGPNRAEFPEGAVVFREGDAADGVYLVESGLVDMIVRRPDGSEAVIGTVGAGEVFGEMALIDGHPRMATAR VAMEATLVRVSNEAFRAQLKSASPVIARVMRQMAHRLRTLAQDMANRAE
Sequences:
>Translated_129_residues MSQSEGVQVPGPNRAEFPEGAVVFREGDAADGVYLVESGLVDMIVRRPDGSEAVIGTVGAGEVFGEMALIDGHPRMATAR VAMEATLVRVSNEAFRAQLKSASPVIARVMRQMAHRLRTLAQDMANRAE >Mature_128_residues SQSEGVQVPGPNRAEFPEGAVVFREGDAADGVYLVESGLVDMIVRRPDGSEAVIGTVGAGEVFGEMALIDGHPRMATARV AMEATLVRVSNEAFRAQLKSASPVIARVMRQMAHRLRTLAQDMANRAE
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13809; Mature: 13678
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSEGVQVPGPNRAEFPEGAVVFREGDAADGVYLVESGLVDMIVRRPDGSEAVIGTVGA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHEEECCCCCCEEEEECCC GEVFGEMALIDGHPRMATARVAMEATLVRVSNEAFRAQLKSASPVIARVMRQMAHRLRTL HHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH AQDMANRAE HHHHHHCCC >Mature Secondary Structure SQSEGVQVPGPNRAEFPEGAVVFREGDAADGVYLVESGLVDMIVRRPDGSEAVIGTVGA CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHEEECCCCCCEEEEECCC GEVFGEMALIDGHPRMATARVAMEATLVRVSNEAFRAQLKSASPVIARVMRQMAHRLRTL HHHHHCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH AQDMANRAE HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA