| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yfaO [C]
Identifier: 83591795
GI number: 83591795
Start: 536043
End: 536558
Strand: Direct
Name: yfaO [C]
Synonym: Rru_A0455
Alternate gene names: 83591795
Gene position: 536043-536558 (Clockwise)
Preceding gene: 83591794
Following gene: 83591798
Centisome position: 12.31
GC content: 69.96
Gene sequence:
>516_bases ATGATTTCCCAACCCGCCGGGCCGGCCGCCTCACGTATCGGCCCGGCGATCCGCTCGCGCTTCATCGCCGTCTATCCCTT CGCGCGGATCGACGGCGAGCCGCGCATGCTGATGCTGCACCGGGCGCGCGGGGTGTTCCAGGGCCATTGGTACATGGTGA CGGGCACCATCGAGCCCGGCGAGCGGGCATGGCGGGCGGCCGAGCGCGAATTGGCCGAGGAAACCGGCCTGATCGCCCGC GCCCTCTATTCCGCCGATTTCACCGACAGCTTCTATAATCCGGCCGATGAATGCATCGAACTGGTGCCGGCCTTCCTGGC CGTGGTCGATGACGATCCGCCGATCACCCTGAACCACGAGGCCGACGCCTTCCAATGGTGCGACCGCGCCGGGGTGCTGG CCCTGATGCCCTTCGCCGGCCACCGCCGCGCCCTGGCCGACCTGTGGCCAACGGCCCTCGATACCCCCCCGGCCCCCTGG CTCCGCCTGCTTCCCAAGCCCGCCCCCGGGTTGTGA
Upstream 100 bases:
>100_bases GGTTTTGGCGTGCGCCTGCTTGACGCCTATGTCGCCGAGACCTTTGAGGAGGCGGGCAAGTAAGCGCGCCCGCGCAACCC GATAAGACCGGGGTCATCGC
Downstream 100 bases:
>100_bases GGGGGGCGGCTCAGGCCTGGGGTTTCACCGTCAATTCGATGCCGAGCGATTTCATGACGGCGAGCGTCGTTTTCAGCGTT GGATTGCCATTTTCGCTGAA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NTP Pyrophosphohydrolase Including Oxidative Damage Repair; NUDIX Hydrolase Protein; MutT Family NTP Pyrophosphatase; MutT/Nudix Family Protein; NTP Pyrophosphohydrolase MutT Family; NUDIX Domain-Containing Protein; Nucleoside Polyphosphate Hydrolase Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MISQPAGPAASRIGPAIRSRFIAVYPFARIDGEPRMLMLHRARGVFQGHWYMVTGTIEPGERAWRAAERELAEETGLIAR ALYSADFTDSFYNPADECIELVPAFLAVVDDDPPITLNHEADAFQWCDRAGVLALMPFAGHRRALADLWPTALDTPPAPW LRLLPKPAPGL
Sequences:
>Translated_171_residues MISQPAGPAASRIGPAIRSRFIAVYPFARIDGEPRMLMLHRARGVFQGHWYMVTGTIEPGERAWRAAERELAEETGLIAR ALYSADFTDSFYNPADECIELVPAFLAVVDDDPPITLNHEADAFQWCDRAGVLALMPFAGHRRALADLWPTALDTPPAPW LRLLPKPAPGL >Mature_171_residues MISQPAGPAASRIGPAIRSRFIAVYPFARIDGEPRMLMLHRARGVFQGHWYMVTGTIEPGERAWRAAERELAEETGLIAR ALYSADFTDSFYNPADECIELVPAFLAVVDDDPPITLNHEADAFQWCDRAGVLALMPFAGHRRALADLWPTALDTPPAPW LRLLPKPAPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 18905; Mature: 18905
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQPAGPAASRIGPAIRSRFIAVYPFARIDGEPRMLMLHRARGVFQGHWYMVTGTIEPG CCCCCCCCCHHHHCHHHHHCEEEEECHHHCCCCCCEEEEEHHCCEECCCEEEEEEECCCC ERAWRAAERELAEETGLIARALYSADFTDSFYNPADECIELVPAFLAVVDDDPPITLNHE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCC ADAFQWCDRAGVLALMPFAGHRRALADLWPTALDTPPAPWLRLLPKPAPGL CHHHHHHHHCCEEEEECCCCCHHHHHHHCCHHCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MISQPAGPAASRIGPAIRSRFIAVYPFARIDGEPRMLMLHRARGVFQGHWYMVTGTIEPG CCCCCCCCCHHHHCHHHHHCEEEEECHHHCCCCCCEEEEEHHCCEECCCEEEEEEECCCC ERAWRAAERELAEETGLIARALYSADFTDSFYNPADECIELVPAFLAVVDDDPPITLNHE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCC ADAFQWCDRAGVLALMPFAGHRRALADLWPTALDTPPAPWLRLLPKPAPGL CHHHHHHHHCCEEEEECCCCCHHHHHHHCCHHCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA