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The map label for this gene is ycaL [C]

Identifier: 83591598

GI number: 83591598

Start: 319389

End: 320447

Strand: Direct

Name: ycaL [C]

Synonym: Rru_A0258

Alternate gene names: 83591598

Gene position: 319389-320447 (Clockwise)

Preceding gene: 83591597

Following gene: 83591599

Centisome position: 7.34

GC content: 72.05

Gene sequence:

>1059_bases
GTGACCCCCGGGGCGGCCCCGGTCGTTCACGGCACCCTGATCGAGGCCGGACGCTCGCGCGGCGCGGCGGCCACCTTGGA
ACCTGTGGCGGGGATGGCGCCGGCGGCCGGTCTGCTGCGCCTGTGCCGGGACGGGGTGGTGGAAACCATCGCCGCCCACA
GCCTGACGGCCAGCCCGCCCTTGGCCGGGGTTCCCCGGCGGCTGGTGCTTGAGGATGGGCGGGTGTTCATCAGCCCCGAT
AACGCGGCGGTCACGGCGCTGCTGCGCGCCGTGGGCGTCCGGCCGCCGGGGGGCTGGATCGCCGCCCTCGAACGGCTTCA
CCCCCGGCTGATCGGCCTTCTCGCCGTCGTGCTGGTGGTCGTGGTCCTGTCGCTGCGCTGGGGGGTGCCGCTGGCCGCCG
ATGCCGCGGCGTCTTTGGTTCCCGCTTCGGTCGAGCGCCTGATCGGCGCCCAGGCCTTCGCCGTGCTTGATGGCTCCGTC
TTGGAGCCGACCACGGTGGCGGCGGTCCGTCAGGACCGCCTGCGCGCCCGCTTCGCCGATCTGACCAAAGCGGCCGGCCT
GTCCGCCGGCGTCGCCCTGGAATTCCGCCAGGGAGGACCCTTTGGCGCCAACGCCATCGCCCTGCCCGGGGGGCCGGTGG
TGGTGACCGACGAACTTCTGGCGCTGGCCGGCGAGGGCGACGACGAGGCGGTGGTCGGTGTCCTCGCCCATGAAATCGGC
CATCTGGTCGGCCGTCACGGGGTGAAGCGCCTGATCCGGGCCGCCGGATTGACGATGATCGCGACGCTTGCCGTTGGCGA
TATGGGCGATCTGGTCAGCGAAGCCGCGGCCTATCCGGTCTTGCTGCTTGATCGCGGTTATAGCCGGAGCTTCGAGCGCG
AAGCCGATTCCTACGCCATCGCCCTGCTGACCCGCAGCGGCGGCGACCCCGCCTCCCTGGCCCGTGCTTTGGCTCGTCTT
GCCGACTTGTGCGGCGCGACTTGCACGCGCGGCGGCTGGTTGGCCAGCCATCCCCCGCTCAACGAGCGCATCCGCGACAT
TAACGAACCCACCCGCTGA

Upstream 100 bases:

>100_bases
TCCCGGCCGGACCGCTGGACGCCTTCATCGAGGCCCGTCAGGCCGAGGGGAATGTCATCGCCTCGGAATTCTCCGATCTT
GAAGGCTTCGAGGTCGGGCT

Downstream 100 bases:

>100_bases
GAGTCCTTGTCGTGGCGTTGGACTTTTATTAAGGCTTGTGGCGTTCTTGTGTTTATTGGGACGAATAAAAACCACATCGG
AGGACGTTTCAATGGGGAAG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: Zn-Dependent Protease With Chaperone Function; M48 Family Peptidase; Zinc Metalloprotease With Chaperone Function; Metalloprotease Protein; Zinc Metalloendopeptidase; Peptidase Lipoprotein; M48 Peptidase Family Protein; Zn-Dependent Protease; TPR Repeat-Containing Zn-Dependent Protease

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTPGAAPVVHGTLIEAGRSRGAAATLEPVAGMAPAAGLLRLCRDGVVETIAAHSLTASPPLAGVPRRLVLEDGRVFISPD
NAAVTALLRAVGVRPPGGWIAALERLHPRLIGLLAVVLVVVVLSLRWGVPLAADAAASLVPASVERLIGAQAFAVLDGSV
LEPTTVAAVRQDRLRARFADLTKAAGLSAGVALEFRQGGPFGANAIALPGGPVVVTDELLALAGEGDDEAVVGVLAHEIG
HLVGRHGVKRLIRAAGLTMIATLAVGDMGDLVSEAAAYPVLLLDRGYSRSFEREADSYAIALLTRSGGDPASLARALARL
ADLCGATCTRGGWLASHPPLNERIRDINEPTR

Sequences:

>Translated_352_residues
MTPGAAPVVHGTLIEAGRSRGAAATLEPVAGMAPAAGLLRLCRDGVVETIAAHSLTASPPLAGVPRRLVLEDGRVFISPD
NAAVTALLRAVGVRPPGGWIAALERLHPRLIGLLAVVLVVVVLSLRWGVPLAADAAASLVPASVERLIGAQAFAVLDGSV
LEPTTVAAVRQDRLRARFADLTKAAGLSAGVALEFRQGGPFGANAIALPGGPVVVTDELLALAGEGDDEAVVGVLAHEIG
HLVGRHGVKRLIRAAGLTMIATLAVGDMGDLVSEAAAYPVLLLDRGYSRSFEREADSYAIALLTRSGGDPASLARALARL
ADLCGATCTRGGWLASHPPLNERIRDINEPTR
>Mature_351_residues
TPGAAPVVHGTLIEAGRSRGAAATLEPVAGMAPAAGLLRLCRDGVVETIAAHSLTASPPLAGVPRRLVLEDGRVFISPDN
AAVTALLRAVGVRPPGGWIAALERLHPRLIGLLAVVLVVVVLSLRWGVPLAADAAASLVPASVERLIGAQAFAVLDGSVL
EPTTVAAVRQDRLRARFADLTKAAGLSAGVALEFRQGGPFGANAIALPGGPVVVTDELLALAGEGDDEAVVGVLAHEIGH
LVGRHGVKRLIRAAGLTMIATLAVGDMGDLVSEAAAYPVLLLDRGYSRSFEREADSYAIALLTRSGGDPASLARALARLA
DLCGATCTRGGWLASHPPLNERIRDINEPTR

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36141; Mature: 36010

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGAAPVVHGTLIEAGRSRGAAATLEPVAGMAPAAGLLRLCRDGVVETIAAHSLTASPP
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LAGVPRRLVLEDGRVFISPDNAAVTALLRAVGVRPPGGWIAALERLHPRLIGLLAVVLVV
CCCCCHHEEEECCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVLSLRWGVPLAADAAASLVPASVERLIGAQAFAVLDGSVLEPTTVAAVRQDRLRARFAD
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTKAAGLSAGVALEFRQGGPFGANAIALPGGPVVVTDELLALAGEGDDEAVVGVLAHEIG
HHHHCCCCCCEEEEEECCCCCCCCEEECCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHH
HLVGRHGVKRLIRAAGLTMIATLAVGDMGDLVSEAAAYPVLLLDRGYSRSFEREADSYAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEE
ALLTRSGGDPASLARALARLADLCGATCTRGGWLASHPPLNERIRDINEPTR
EEEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
TPGAAPVVHGTLIEAGRSRGAAATLEPVAGMAPAAGLLRLCRDGVVETIAAHSLTASPP
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LAGVPRRLVLEDGRVFISPDNAAVTALLRAVGVRPPGGWIAALERLHPRLIGLLAVVLVV
CCCCCHHEEEECCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVLSLRWGVPLAADAAASLVPASVERLIGAQAFAVLDGSVLEPTTVAAVRQDRLRARFAD
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTKAAGLSAGVALEFRQGGPFGANAIALPGGPVVVTDELLALAGEGDDEAVVGVLAHEIG
HHHHCCCCCCEEEEEECCCCCCCCEEECCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHH
HLVGRHGVKRLIRAAGLTMIATLAVGDMGDLVSEAAAYPVLLLDRGYSRSFEREADSYAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCEEE
ALLTRSGGDPASLARALARLADLCGATCTRGGWLASHPPLNERIRDINEPTR
EEEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA