| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yjgN [H]
Identifier: 83591597
GI number: 83591597
Start: 318316
End: 319392
Strand: Direct
Name: yjgN [H]
Synonym: Rru_A0257
Alternate gene names: 83591597
Gene position: 318316-319392 (Clockwise)
Preceding gene: 83591596
Following gene: 83591598
Centisome position: 7.31
GC content: 67.97
Gene sequence:
>1077_bases ATGAAGGATTTCGCCGGACCCGGCCCGGTCCCTCCCGCTCCGTCCGGCGCGCCGCTTCCGGTGGTTTTCACCGGCACGGC GCGCGCTTATTTTCGCATCTGGTTGGTCAATCTGCTGCTGAGCCTAGCGACGATCGGCATCTGGTCGGCCTGGGCCAAGG TGCGGCGGCGGCGCTATTTCCTGGGCAACACCCAGGTTGGCGGCGCGACCTTCGAGTATCTGGCCACCGGGCTGACCCTA CTCAAGGGGCGCTTGATCGTGGTCGCCGCCCTGGCGCTTTACGCCGGGCTCCAGGCCATCGAGCCGCGCGTTTCGTGGCT GCTTGGTCTTGGCTACGTCGTCGTCCTGCCCTGGCTGATCGTGCGCTCCCTGGCCTTCAACGCCCGCAACACCCAATGGT GCGCCGTGCGCTTCGGCTTTCGGGCGCGCTGGTGGGATGGCTTCGTCGCCGCCATCGCCATGCCGTTCCTGGCGCTGATC TCGCTTGGCCTGCTGCTGCCGGTCAGTACCCGGCGGACGGCGACCTTCTGGGTCAATGGCCATCGCCTGGGAGCGGCGGC GTTTTCCAGCGCTCCCCCTTTGGCGCCGCTGTACCGTGCCCTGGGTCTGGCTTTGGCGGTTTTCATGGGGATGACGGCTT TGGCCGGCGGCGCGGTGTGGGGGGGCGCCCTGGCGCTGGCCCTGGCCCCGGGCGAAACGGGGCTCGCCCTCAACACCCTG CCCTTGGTCGGGCTGCTGGTGATCTTCCCGGCTTTCCTTTTCGCCGGCGCCTTGTACCGCGCCCGGCTGCGCAACACCGT TCTTGGCGCGATGACGCTTGAGGGCGGTCACCGCTTCCGCTCGACCCTGTCGGCGCCGCGCTTCGCCTGGATCGTGTTGT CGAACATGGTGGTGACCGTGCTCAGCCTTGGTCTGGCCCATCCCTGGGCGGCGATCCGCCTGTGGCGCTATCAATGCGCC TGCCTGACGGTGATCCCGGCCGGACCGCTGGACGCCTTCATCGAGGCCCGTCAGGCCGAGGGGAATGTCATCGCCTCGGA ATTCTCCGATCTTGAAGGCTTCGAGGTCGGGCTGTGA
Upstream 100 bases:
>100_bases ATCGCCTTGCCGATGGTGCGGCGGCTGTAAGCCCCGCTTCCCGTGGGATGAGCCGAAAGGCTATGATGGCGCCTTCCGCC ATCCCGCCAAGGACGCTCCC
Downstream 100 bases:
>100_bases CCCCCGGGGCGGCCCCGGTCGTTCACGGCACCCTGATCGAGGCCGGACGCTCGCGCGGCGCGGCGGCCACCTTGGAACCT GTGGCGGGGATGGCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL
Sequences:
>Translated_358_residues MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL >Mature_358_residues MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 38402; Mature: 38402
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYF CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNTQVGGATFEYLATGLTLLKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALISLGLLLPVSTRRTATFWVNG HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC HRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL CEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCEEHHH PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH LSLGLAHPWAAIRLWRYQCACLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL HHHHHCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEHHHHCCCCCCCCCC >Mature Secondary Structure MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYF CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNTQVGGATFEYLATGLTLLKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALISLGLLLPVSTRRTATFWVNG HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC HRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL CEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCEEHHH PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH LSLGLAHPWAAIRLWRYQCACLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL HHHHHCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]