Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is yjgN [H]

Identifier: 83591597

GI number: 83591597

Start: 318316

End: 319392

Strand: Direct

Name: yjgN [H]

Synonym: Rru_A0257

Alternate gene names: 83591597

Gene position: 318316-319392 (Clockwise)

Preceding gene: 83591596

Following gene: 83591598

Centisome position: 7.31

GC content: 67.97

Gene sequence:

>1077_bases
ATGAAGGATTTCGCCGGACCCGGCCCGGTCCCTCCCGCTCCGTCCGGCGCGCCGCTTCCGGTGGTTTTCACCGGCACGGC
GCGCGCTTATTTTCGCATCTGGTTGGTCAATCTGCTGCTGAGCCTAGCGACGATCGGCATCTGGTCGGCCTGGGCCAAGG
TGCGGCGGCGGCGCTATTTCCTGGGCAACACCCAGGTTGGCGGCGCGACCTTCGAGTATCTGGCCACCGGGCTGACCCTA
CTCAAGGGGCGCTTGATCGTGGTCGCCGCCCTGGCGCTTTACGCCGGGCTCCAGGCCATCGAGCCGCGCGTTTCGTGGCT
GCTTGGTCTTGGCTACGTCGTCGTCCTGCCCTGGCTGATCGTGCGCTCCCTGGCCTTCAACGCCCGCAACACCCAATGGT
GCGCCGTGCGCTTCGGCTTTCGGGCGCGCTGGTGGGATGGCTTCGTCGCCGCCATCGCCATGCCGTTCCTGGCGCTGATC
TCGCTTGGCCTGCTGCTGCCGGTCAGTACCCGGCGGACGGCGACCTTCTGGGTCAATGGCCATCGCCTGGGAGCGGCGGC
GTTTTCCAGCGCTCCCCCTTTGGCGCCGCTGTACCGTGCCCTGGGTCTGGCTTTGGCGGTTTTCATGGGGATGACGGCTT
TGGCCGGCGGCGCGGTGTGGGGGGGCGCCCTGGCGCTGGCCCTGGCCCCGGGCGAAACGGGGCTCGCCCTCAACACCCTG
CCCTTGGTCGGGCTGCTGGTGATCTTCCCGGCTTTCCTTTTCGCCGGCGCCTTGTACCGCGCCCGGCTGCGCAACACCGT
TCTTGGCGCGATGACGCTTGAGGGCGGTCACCGCTTCCGCTCGACCCTGTCGGCGCCGCGCTTCGCCTGGATCGTGTTGT
CGAACATGGTGGTGACCGTGCTCAGCCTTGGTCTGGCCCATCCCTGGGCGGCGATCCGCCTGTGGCGCTATCAATGCGCC
TGCCTGACGGTGATCCCGGCCGGACCGCTGGACGCCTTCATCGAGGCCCGTCAGGCCGAGGGGAATGTCATCGCCTCGGA
ATTCTCCGATCTTGAAGGCTTCGAGGTCGGGCTGTGA

Upstream 100 bases:

>100_bases
ATCGCCTTGCCGATGGTGCGGCGGCTGTAAGCCCCGCTTCCCGTGGGATGAGCCGAAAGGCTATGATGGCGCCTTCCGCC
ATCCCGCCAAGGACGCTCCC

Downstream 100 bases:

>100_bases
CCCCCGGGGCGGCCCCGGTCGTTCACGGCACCCTGATCGAGGCCGGACGCTCGCGCGGCGCGGCGGCCACCTTGGAACCT
GTGGCGGGGATGGCGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL
LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI
SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL
PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA
CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL

Sequences:

>Translated_358_residues
MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL
LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI
SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL
PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA
CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL
>Mature_358_residues
MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYFLGNTQVGGATFEYLATGLTL
LKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLIVRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALI
SLGLLLPVSTRRTATFWVNGHRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL
PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTVLSLGLAHPWAAIRLWRYQCA
CLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL

Specific function: Unknown

COG id: COG4269

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010295 [H]

Pfam domain/function: PF05987 DUF898 [H]

EC number: NA

Molecular weight: Translated: 38402; Mature: 38402

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYF
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNTQVGGATFEYLATGLTLLKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALISLGLLLPVSTRRTATFWVNG
HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
HRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL
CEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCEEHHH
PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH
LSLGLAHPWAAIRLWRYQCACLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL
HHHHHCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEHHHHCCCCCCCCCC
>Mature Secondary Structure
MKDFAGPGPVPPAPSGAPLPVVFTGTARAYFRIWLVNLLLSLATIGIWSAWAKVRRRRYF
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNTQVGGATFEYLATGLTLLKGRLIVVAALALYAGLQAIEPRVSWLLGLGYVVVLPWLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRSLAFNARNTQWCAVRFGFRARWWDGFVAAIAMPFLALISLGLLLPVSTRRTATFWVNG
HHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
HRLGAAAFSSAPPLAPLYRALGLALAVFMGMTALAGGAVWGGALALALAPGETGLALNTL
CEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCEEHHH
PLVGLLVIFPAFLFAGALYRARLRNTVLGAMTLEGGHRFRSTLSAPRFAWIVLSNMVVTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCHHHHHHHHHHHHHH
LSLGLAHPWAAIRLWRYQCACLTVIPAGPLDAFIEARQAEGNVIASEFSDLEGFEVGL
HHHHHCCHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 8253666 [H]