| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591580
Identifier: 83591580
GI number: 83591580
Start: 294576
End: 295127
Strand: Direct
Name: 83591580
Synonym: Rru_A0240
Alternate gene names: NA
Gene position: 294576-295127 (Clockwise)
Preceding gene: 83591579
Following gene: 83591593
Centisome position: 6.77
GC content: 66.67
Gene sequence:
>552_bases GTGGTCTGCGATGACATCCCGGGAACGCTCCGCCCCCCCTCCTTCGCGCTTGGCGTCCCCGAAGGCGACGATCACGAGCG TCTGATCTGCACCAGTTGCGGCTTCATCCGCTACGACAATCCCAAGATCATCGTCGGCGCCGTCTGCACCTGGGAGTCCA AGGTGCTGCTGGTGCGCCGGGCCATCGAACCGCGCGTCGGCTATTGGTGCATGCCCGCCGGTTTCATGGAGCTGAACGAG ACCACCGAGGCCGGGGCGGCGCGCGAGGTGTGGGAGGAAGCCCGCGCCCGGGTGCGTATAGGCCCGCTGCTCGCCCTTTA TAACCTGCCCCATATCAGTCAGGTTCACCTGATCTACAGCGCCACCATGCTCAGCCCCGACCATGCGCCGGGCAGCGAAA GCCTGGAAACCTGCCTTGTCGGGTGGGGCGAGATCCCCTGGGGCGATCTCGCCTATCCCACCGTGGAATGGGCCCTGCGC CAGCACGCCGAACGTGGTGGACTGGCCGGCGCCCCCTATGGCAATCGGGCCGAGACCTACGCCCTGCCTTAA
Upstream 100 bases:
>100_bases CGAGGCCGGGGGCCGCTATATCGTTGTCGATGGCCGCCGCTATAATCTGGACGCGCCGCGCGGCACCTATGTGAACGTCG TCATCTGAGGGAGGGGTGGT
Downstream 100 bases:
>100_bases AACAAATTCCCGAGTCCTGTGAACCAGAGTGCGACGACGATTTTCTGGACGATCAAGCTCTGAGAGCGGGGACCGGAGTC CCCGCTCACCGCTTTAAACA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; MutT/NUDIX Family Protein; Nudix Hydrolase MutT Family; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Related Nudix Hydrolase; Mutator MutT Protein; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MVCDDIPGTLRPPSFALGVPEGDDHERLICTSCGFIRYDNPKIIVGAVCTWESKVLLVRRAIEPRVGYWCMPAGFMELNE TTEAGAAREVWEEARARVRIGPLLALYNLPHISQVHLIYSATMLSPDHAPGSESLETCLVGWGEIPWGDLAYPTVEWALR QHAERGGLAGAPYGNRAETYALP
Sequences:
>Translated_183_residues MVCDDIPGTLRPPSFALGVPEGDDHERLICTSCGFIRYDNPKIIVGAVCTWESKVLLVRRAIEPRVGYWCMPAGFMELNE TTEAGAAREVWEEARARVRIGPLLALYNLPHISQVHLIYSATMLSPDHAPGSESLETCLVGWGEIPWGDLAYPTVEWALR QHAERGGLAGAPYGNRAETYALP >Mature_183_residues MVCDDIPGTLRPPSFALGVPEGDDHERLICTSCGFIRYDNPKIIVGAVCTWESKVLLVRRAIEPRVGYWCMPAGFMELNE TTEAGAAREVWEEARARVRIGPLLALYNLPHISQVHLIYSATMLSPDHAPGSESLETCLVGWGEIPWGDLAYPTVEWALR QHAERGGLAGAPYGNRAETYALP
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20161; Mature: 20161
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCDDIPGTLRPPSFALGVPEGDDHERLICTSCGFIRYDNPKIIVGAVCTWESKVLLVRR CCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCCCEEEEEEECCCCHHEEEHH AIEPRVGYWCMPAGFMELNETTEAGAAREVWEEARARVRIGPLLALYNLPHISQVHLIYS HCCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHEEEHHHEEEECCCCCCCEEEEEEE ATMLSPDHAPGSESLETCLVGWGEIPWGDLAYPTVEWALRQHAERGGLAGAPYGNRAETY EEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE ALP CCC >Mature Secondary Structure MVCDDIPGTLRPPSFALGVPEGDDHERLICTSCGFIRYDNPKIIVGAVCTWESKVLLVRR CCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCCCEEEEEEECCCCHHEEEHH AIEPRVGYWCMPAGFMELNETTEAGAAREVWEEARARVRIGPLLALYNLPHISQVHLIYS HCCCCCCEEECCCCCEECCCCCCCCHHHHHHHHHHHEEEHHHEEEECCCCCCCEEEEEEE ATMLSPDHAPGSESLETCLVGWGEIPWGDLAYPTVEWALRQHAERGGLAGAPYGNRAETY EEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE ALP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA