| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591540
Identifier: 83591540
GI number: 83591540
Start: 248466
End: 249677
Strand: Direct
Name: 83591540
Synonym: Rru_A0200
Alternate gene names: NA
Gene position: 248466-249677 (Clockwise)
Preceding gene: 83591538
Following gene: 83591545
Centisome position: 5.71
GC content: 51.16
Gene sequence:
>1212_bases ATGAAGCCTAACGACGAGTTCAAGGAAAGTAAGGTGAAAGCCACGCCTTCTGATGCTGAGTTGGAAGCAGTGGTTATATC ACTGCAAAATTCCATTCGAGAATGGGCGGCTAGGCACGAGCTTTGGTTCGACTGCGGCTTTCAGACTTACGCCCAACGAG TGGATGGTGAACCTGAAGCAGCCCCTGTTGCAACTATTTTGCATTTCAATGGAGATATTGGTCGTGCGCTAGATGGGGAA TTTGGTGATCTCGATGTCGAGTTCATCGAGCTACTCGCGCGGCATGGTTTCTGGTTCGATCGGATCGATGAGGTGAGCGT TCATATCTATCCTGAGGACGATAGCCCTCTGTTCCAACCGTTCCTCGACTATGTCAACTGGCAATGGGTATGCGGGCTGG TACAGCAGGACATAGCCGATGTTCACGAGGAGCTGTATTCGCATTTCGCCAAGCGACCAGACGATTTGCATCGGCTCACA TGGCGCGAGTTTGAAATTTTACTATTCAGAATATTTCAAAGCCAAGGCTTTACGTGTGAGCTCGGCCCCGGCTCGAATGA TGGGGGAATTGATGTTCGCGTGCTTCAGCGCGATCCTCTCGGGGACGTACTGACGCTTGTTCAGGCAAAAAAATACTCAC CGAGAAACAAAATAGATATGTCTGCTGTGGCAGCACTGCATGGTGTGGCAGATGTCGAGAATGCGCAAAAGAGCATTTTC GTGACAACATCCGATTACCTACCCTCAGCACGCAAGTTCGCTGGCCGAACGCGCATTCCGATGACACTTGCTACGTCGAA CGACGTGCGGAACTGGTGTCAGAATGCAAGCGACGGGATTATTCGTGACAAATCAAAACTTGTCGCGCCATCAGCAGTAT CGTACTTGCTTCAGAATCTTTCGTCGAAAGATTCCCGCATAGTCTACGCTCGTACTGGCTACTCGGTCATCACGAACCAG TTCGCGGTTGTGCTAAAGGAAACGAAGTACGCAGCCCTGTTAATGGGGATTCCTTCGCGAACGATCTCCGGTTACTGGCA GGAGGGTTTTGAAGTGCCTGACATAGGCTCTAAATGCCTAGAGGGCCTGACAGCGGATAACGTGTTCCGCGCGAAGCGGT CGGTGAGCGACGGAAAGGTGAGGTACTGGAACGGGCATGATTTATTCAGGGCTTGGAACGGCGAGCCCGTGCATTTCAAT CTCTGTGATTAA
Upstream 100 bases:
>100_bases GGAGCGTAGCGTCCGCCCAGACAGCAGCACATGTCAGCGAATATTGGCACTATGTAATAATGAGATGGGTGGCACTTTCT TGCGCTTGTGATGGTGAAAT
Downstream 100 bases:
>100_bases GGTTATCGTTCTGCGGCGTTGAACAAGTCTTGGCCCAATAAGCTATCGGAACTTGTCCTTTTAAACCGCGACTTGAAGCG AATGCCGATATCGGTAGTTT
Product: restriction endonuclease
Products: NA
Alternate protein names: Mrr Restriction System Protein
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKPNDEFKESKVKATPSDAELEAVVISLQNSIREWAARHELWFDCGFQTYAQRVDGEPEAAPVATILHFNGDIGRALDGE FGDLDVEFIELLARHGFWFDRIDEVSVHIYPEDDSPLFQPFLDYVNWQWVCGLVQQDIADVHEELYSHFAKRPDDLHRLT WREFEILLFRIFQSQGFTCELGPGSNDGGIDVRVLQRDPLGDVLTLVQAKKYSPRNKIDMSAVAALHGVADVENAQKSIF VTTSDYLPSARKFAGRTRIPMTLATSNDVRNWCQNASDGIIRDKSKLVAPSAVSYLLQNLSSKDSRIVYARTGYSVITNQ FAVVLKETKYAALLMGIPSRTISGYWQEGFEVPDIGSKCLEGLTADNVFRAKRSVSDGKVRYWNGHDLFRAWNGEPVHFN LCD
Sequences:
>Translated_403_residues MKPNDEFKESKVKATPSDAELEAVVISLQNSIREWAARHELWFDCGFQTYAQRVDGEPEAAPVATILHFNGDIGRALDGE FGDLDVEFIELLARHGFWFDRIDEVSVHIYPEDDSPLFQPFLDYVNWQWVCGLVQQDIADVHEELYSHFAKRPDDLHRLT WREFEILLFRIFQSQGFTCELGPGSNDGGIDVRVLQRDPLGDVLTLVQAKKYSPRNKIDMSAVAALHGVADVENAQKSIF VTTSDYLPSARKFAGRTRIPMTLATSNDVRNWCQNASDGIIRDKSKLVAPSAVSYLLQNLSSKDSRIVYARTGYSVITNQ FAVVLKETKYAALLMGIPSRTISGYWQEGFEVPDIGSKCLEGLTADNVFRAKRSVSDGKVRYWNGHDLFRAWNGEPVHFN LCD >Mature_403_residues MKPNDEFKESKVKATPSDAELEAVVISLQNSIREWAARHELWFDCGFQTYAQRVDGEPEAAPVATILHFNGDIGRALDGE FGDLDVEFIELLARHGFWFDRIDEVSVHIYPEDDSPLFQPFLDYVNWQWVCGLVQQDIADVHEELYSHFAKRPDDLHRLT WREFEILLFRIFQSQGFTCELGPGSNDGGIDVRVLQRDPLGDVLTLVQAKKYSPRNKIDMSAVAALHGVADVENAQKSIF VTTSDYLPSARKFAGRTRIPMTLATSNDVRNWCQNASDGIIRDKSKLVAPSAVSYLLQNLSSKDSRIVYARTGYSVITNQ FAVVLKETKYAALLMGIPSRTISGYWQEGFEVPDIGSKCLEGLTADNVFRAKRSVSDGKVRYWNGHDLFRAWNGEPVHFN LCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45550; Mature: 45550
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNDEFKESKVKATPSDAELEAVVISLQNSIREWAARHELWFDCGFQTYAQRVDGEPEA CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCC APVATILHFNGDIGRALDGEFGDLDVEFIELLARHGFWFDRIDEVSVHIYPEDDSPLFQP CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH FLDYVNWQWVCGLVQQDIADVHEELYSHFAKRPDDLHRLTWREFEILLFRIFQSQGFTCE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE LGPGSNDGGIDVRVLQRDPLGDVLTLVQAKKYSPRNKIDMSAVAALHGVADVENAQKSIF ECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE VTTSDYLPSARKFAGRTRIPMTLATSNDVRNWCQNASDGIIRDKSKLVAPSAVSYLLQNL EEECCCCCHHHHHCCCCCCCEEEECCHHHHHHHCCCCCCCEECHHHHCCHHHHHHHHHHC SSKDSRIVYARTGYSVITNQFAVVLKETKYAALLMGIPSRTISGYWQEGFEVPDIGSKCL CCCCCEEEEEECCHHHHHHHHHHEEHHCHHEEEEECCCCHHHHHHHHCCCCCCCCCHHHH EGLTADNVFRAKRSVSDGKVRYWNGHDLFRAWNGEPVHFNLCD CCCCHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEEEECCC >Mature Secondary Structure MKPNDEFKESKVKATPSDAELEAVVISLQNSIREWAARHELWFDCGFQTYAQRVDGEPEA CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCC APVATILHFNGDIGRALDGEFGDLDVEFIELLARHGFWFDRIDEVSVHIYPEDDSPLFQP CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHH FLDYVNWQWVCGLVQQDIADVHEELYSHFAKRPDDLHRLTWREFEILLFRIFQSQGFTCE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE LGPGSNDGGIDVRVLQRDPLGDVLTLVQAKKYSPRNKIDMSAVAALHGVADVENAQKSIF ECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE VTTSDYLPSARKFAGRTRIPMTLATSNDVRNWCQNASDGIIRDKSKLVAPSAVSYLLQNL EEECCCCCHHHHHCCCCCCCEEEECCHHHHHHHCCCCCCCEECHHHHCCHHHHHHHHHHC SSKDSRIVYARTGYSVITNQFAVVLKETKYAALLMGIPSRTISGYWQEGFEVPDIGSKCL CCCCCEEEEEECCHHHHHHHHHHEEHHCHHEEEEECCCCHHHHHHHHCCCCCCCCCHHHH EGLTADNVFRAKRSVSDGKVRYWNGHDLFRAWNGEPVHFNLCD CCCCHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA