| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591538
Identifier: 83591538
GI number: 83591538
Start: 246145
End: 248130
Strand: Direct
Name: 83591538
Synonym: Rru_A0198
Alternate gene names: NA
Gene position: 246145-248130 (Clockwise)
Preceding gene: 83591537
Following gene: 83591540
Centisome position: 5.65
GC content: 71.35
Gene sequence:
>1986_bases ATGCCGATGTTTCAGCTTGGTGATCCGGTCAACGTGCTTTCCGGACTCGGCTCGGTGGCGGGGGAGGTGGCGCCGCCGCC GGGGCCGCGCCCGCTCATCGCCATTTCCCGCGCCCAACCGCCCTCCTTGCGACCCTTCGCGCCGCTAGCCGTGACGCTGC ATGAGAGCCTTGGCGGTCTGCTCACGGCGCTTTTCGATGTGAGGGTCGATGTCTCGCGCGAGCACCTGGGGCAGCGCCGG CTCGACGCCGCCGCGCTGATCGCCCCCGATCCGGCGTTCTTGGCGCGGATCGGCGCCCCCGCCGCCGGCTATCTGCTCTT CACCCTCGACCGCGACGATGGCGAGGTCGTCCATGATGTGGCGTCGATCGGCATCGATGACCGCGTTCATATGGCGGACT ATTGGACGGAGGCGGGCAAGCGCGCCATGGCGCGCCTGCGCTCGACGGCGACACGGCTCGACGCCGACGGCGTGTGGCGG CCGTTCGTGCGTCAGGCGCAAATGGCGCGCTATCTCGACTATTTTTATCACCACGGCACCCATTTCATCTCGCGGATCGG CTATGGCCAGCGGCTCTGGCAGGTCTTCGCCCTCCGTGCCGAGCGCATGGCGTTCCTGGTCGATCATTTTCGCCGCGTCG TTCCCGGCGGACGGGCGGAGGGAGCGCTGGCCGCGTCCTTCGCCCAGTTCTGCGGCCCCGAATGGTGTGACCGGCGGAGC GAAATCCTGGCGCTGACCCCGGAGGATACCCTGCCCGGGCTGGTGGCGGCCGGAGCGTTCAAAGGCGTCGGCGACGCCGA TGTGCTTGCCGCGCCGTTCCTTGAAGCCGAGTGGCGGGCCGCCCGGCTGCTGGATGGTTTTGGCGCCGGCGGTCCCCTTC GCCTGCATCTGATGTCGCAGGCCTATCTCATGGGCGAGGGGCGCGCCCGCGTGTGGCAGAAGGTGCTCAACGTCGCCCTG GTCCAGCGCTATGGCGCCGGGACCGCCGCCGTTTCGCAGGGAGAGCCGGCGATGTCGCCGGCCCTTGCCACCGGCGCGGC GACGGGAGGCCTTGCCGATCGGCTGCGTCTTCGCGGCGGCGCCGCTGTCGCCGTGCCCGCCGGTCTGCGCGAATTATGGG TGGGCGACATCGCCGTGGAGCCCTTCGGCGCCCCCGCCGTCGTCTGCCATGCGCCGGAGGGGCTGACCCTGCATGCCGGC GAAATCGACGGCATCGTCGCGGTGGAAGAGTCGCCGTCGCGGCGCGTCACCTATGGCTGGGGCCTGAAGATGGGCCGTGA TCCGCGGACGGGCCGGGTGATCGCGCTCGACGATCCGCGCCGACCCACGGCCCCCCAACTCGCCGGCGGCGTTCAGAGGC TGACCGGCCTTTTGCTCCATGGGGCGACCCTTCTCGCTCTCGGCGGGGCGGAGAGGGCGCGGGGCCAAGGCCTTGTCGCC TGGATCGGCGAGATGGTGGGGGCGGCTTCGTCCGTTCCGCCATCCGTTCCGCCAGAGGCCGCCGCAGCGGCGGGCGACCC GTGGACCAAGCTGGCCGAGGGGGCGGCGGCGCTTGGCGGCGCGCCCCCCGGCGCTCTTGATCTAGCGAAAAATCGGCACG GCGCGGCGGCCTTGCTGGCCTTGGTGCCCAGGGTGGGGATGGCGGAGCTGCGGCTGCATTGCGAAGGCGTCACCCCCCAG CTTGACGAGGATATCGACGCCCTTGCCAAGGCGCTAGCAACGGCGGTCGCCGCCGTGGACGGGCAGGAGACGCCGCTGTT CCCAGGACTGGCGACCTCGGGCGAGGCCGCCACACGCCTCTGGCTCCTCTCCCTCGGGCTCGCCTTCCCCCTTGCCCGCC TGCTGCGGCCATCCGCCGATGCGGAGGGCGCGACCTGCGGGCCGGGGCTGTCCGATCTCGCGACGGCCCTCTGGGCGCAA GAGCGCCAAGACCGCGCATCGCCCGCCCCGGCCTTGCAATCACCCCACGCGGTTTCTTCGCCATAG
Upstream 100 bases:
>100_bases AAACCTGCTTTTTCCCGACCACCTCATCACCATTGGCCGGGTGGCCGCTCCGGCCGATCTGCTTTTGGCCTGCACCTTCC AGCCGCTCGGGTGACCCCTC
Downstream 100 bases:
>100_bases GCCAAATCCCCGGCACCCTGGCCCAGAGCGCGCCAGCCCTGCGCCCCGTGTGTGCAGGCGGTTCAGGGTCTGCCAATCGA ACCCCTTCCAGGCCCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MPMFQLGDPVNVLSGLGSVAGEVAPPPGPRPLIAISRAQPPSLRPFAPLAVTLHESLGGLLTALFDVRVDVSREHLGQRR LDAAALIAPDPAFLARIGAPAAGYLLFTLDRDDGEVVHDVASIGIDDRVHMADYWTEAGKRAMARLRSTATRLDADGVWR PFVRQAQMARYLDYFYHHGTHFISRIGYGQRLWQVFALRAERMAFLVDHFRRVVPGGRAEGALAASFAQFCGPEWCDRRS EILALTPEDTLPGLVAAGAFKGVGDADVLAAPFLEAEWRAARLLDGFGAGGPLRLHLMSQAYLMGEGRARVWQKVLNVAL VQRYGAGTAAVSQGEPAMSPALATGAATGGLADRLRLRGGAAVAVPAGLRELWVGDIAVEPFGAPAVVCHAPEGLTLHAG EIDGIVAVEESPSRRVTYGWGLKMGRDPRTGRVIALDDPRRPTAPQLAGGVQRLTGLLLHGATLLALGGAERARGQGLVA WIGEMVGAASSVPPSVPPEAAAAAGDPWTKLAEGAAALGGAPPGALDLAKNRHGAAALLALVPRVGMAELRLHCEGVTPQ LDEDIDALAKALATAVAAVDGQETPLFPGLATSGEAATRLWLLSLGLAFPLARLLRPSADAEGATCGPGLSDLATALWAQ ERQDRASPAPALQSPHAVSSP
Sequences:
>Translated_661_residues MPMFQLGDPVNVLSGLGSVAGEVAPPPGPRPLIAISRAQPPSLRPFAPLAVTLHESLGGLLTALFDVRVDVSREHLGQRR LDAAALIAPDPAFLARIGAPAAGYLLFTLDRDDGEVVHDVASIGIDDRVHMADYWTEAGKRAMARLRSTATRLDADGVWR PFVRQAQMARYLDYFYHHGTHFISRIGYGQRLWQVFALRAERMAFLVDHFRRVVPGGRAEGALAASFAQFCGPEWCDRRS EILALTPEDTLPGLVAAGAFKGVGDADVLAAPFLEAEWRAARLLDGFGAGGPLRLHLMSQAYLMGEGRARVWQKVLNVAL VQRYGAGTAAVSQGEPAMSPALATGAATGGLADRLRLRGGAAVAVPAGLRELWVGDIAVEPFGAPAVVCHAPEGLTLHAG EIDGIVAVEESPSRRVTYGWGLKMGRDPRTGRVIALDDPRRPTAPQLAGGVQRLTGLLLHGATLLALGGAERARGQGLVA WIGEMVGAASSVPPSVPPEAAAAAGDPWTKLAEGAAALGGAPPGALDLAKNRHGAAALLALVPRVGMAELRLHCEGVTPQ LDEDIDALAKALATAVAAVDGQETPLFPGLATSGEAATRLWLLSLGLAFPLARLLRPSADAEGATCGPGLSDLATALWAQ ERQDRASPAPALQSPHAVSSP >Mature_660_residues PMFQLGDPVNVLSGLGSVAGEVAPPPGPRPLIAISRAQPPSLRPFAPLAVTLHESLGGLLTALFDVRVDVSREHLGQRRL DAAALIAPDPAFLARIGAPAAGYLLFTLDRDDGEVVHDVASIGIDDRVHMADYWTEAGKRAMARLRSTATRLDADGVWRP FVRQAQMARYLDYFYHHGTHFISRIGYGQRLWQVFALRAERMAFLVDHFRRVVPGGRAEGALAASFAQFCGPEWCDRRSE ILALTPEDTLPGLVAAGAFKGVGDADVLAAPFLEAEWRAARLLDGFGAGGPLRLHLMSQAYLMGEGRARVWQKVLNVALV QRYGAGTAAVSQGEPAMSPALATGAATGGLADRLRLRGGAAVAVPAGLRELWVGDIAVEPFGAPAVVCHAPEGLTLHAGE IDGIVAVEESPSRRVTYGWGLKMGRDPRTGRVIALDDPRRPTAPQLAGGVQRLTGLLLHGATLLALGGAERARGQGLVAW IGEMVGAASSVPPSVPPEAAAAAGDPWTKLAEGAAALGGAPPGALDLAKNRHGAAALLALVPRVGMAELRLHCEGVTPQL DEDIDALAKALATAVAAVDGQETPLFPGLATSGEAATRLWLLSLGLAFPLARLLRPSADAEGATCGPGLSDLATALWAQE RQDRASPAPALQSPHAVSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69141; Mature: 69010
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMFQLGDPVNVLSGLGSVAGEVAPPPGPRPLIAISRAQPPSLRPFAPLAVTLHESLGGL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH LTALFDVRVDVSREHLGQRRLDAAALIAPDPAFLARIGAPAAGYLLFTLDRDDGEVVHDV HHHHHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHH ASIGIDDRVHMADYWTEAGKRAMARLRSTATRLDADGVWRPFVRQAQMARYLDYFYHHGT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH HFISRIGYGQRLWQVFALRAERMAFLVDHFRRVVPGGRAEGALAASFAQFCGPEWCDRRS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCC EILALTPEDTLPGLVAAGAFKGVGDADVLAAPFLEAEWRAARLLDGFGAGGPLRLHLMSQ CEEEECCCCCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHH AYLMGEGRARVWQKVLNVALVQRYGAGTAAVSQGEPAMSPALATGAATGGLADRLRLRGG HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCC AAVAVPAGLRELWVGDIAVEPFGAPAVVCHAPEGLTLHAGEIDGIVAVEESPSRRVTYGW CEEECCCCHHHHHHCCEEECCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCEEEEEC GLKMGRDPRTGRVIALDDPRRPTAPQLAGGVQRLTGLLLHGATLLALGGAERARGQGLVA CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCHHHH WIGEMVGAASSVPPSVPPEAAAAAGDPWTKLAEGAAALGGAPPGALDLAKNRHGAAALLA HHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHH LVPRVGMAELRLHCEGVTPQLDEDIDALAKALATAVAAVDGQETPLFPGLATSGEAATRL HHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH WLLSLGLAFPLARLLRPSADAEGATCGPGLSDLATALWAQERQDRASPAPALQSPHAVSS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC P C >Mature Secondary Structure PMFQLGDPVNVLSGLGSVAGEVAPPPGPRPLIAISRAQPPSLRPFAPLAVTLHESLGGL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH LTALFDVRVDVSREHLGQRRLDAAALIAPDPAFLARIGAPAAGYLLFTLDRDDGEVVHDV HHHHHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHH ASIGIDDRVHMADYWTEAGKRAMARLRSTATRLDADGVWRPFVRQAQMARYLDYFYHHGT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH HFISRIGYGQRLWQVFALRAERMAFLVDHFRRVVPGGRAEGALAASFAQFCGPEWCDRRS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCC EILALTPEDTLPGLVAAGAFKGVGDADVLAAPFLEAEWRAARLLDGFGAGGPLRLHLMSQ CEEEECCCCCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHH AYLMGEGRARVWQKVLNVALVQRYGAGTAAVSQGEPAMSPALATGAATGGLADRLRLRGG HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCC AAVAVPAGLRELWVGDIAVEPFGAPAVVCHAPEGLTLHAGEIDGIVAVEESPSRRVTYGW CEEECCCCHHHHHHCCEEECCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCEEEEEC GLKMGRDPRTGRVIALDDPRRPTAPQLAGGVQRLTGLLLHGATLLALGGAERARGQGLVA CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCHHHH WIGEMVGAASSVPPSVPPEAAAAAGDPWTKLAEGAAALGGAPPGALDLAKNRHGAAALLA HHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHH LVPRVGMAELRLHCEGVTPQLDEDIDALAKALATAVAAVDGQETPLFPGLATSGEAATRL HHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH WLLSLGLAFPLARLLRPSADAEGATCGPGLSDLATALWAQERQDRASPAPALQSPHAVSS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA