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The map label for this gene is xcpR [H]

Identifier: 83591453

GI number: 83591453

Start: 131507

End: 133573

Strand: Direct

Name: xcpR [H]

Synonym: Rru_A0113

Alternate gene names: 83591453

Gene position: 131507-133573 (Clockwise)

Preceding gene: 83591452

Following gene: 83591454

Centisome position: 3.02

GC content: 69.91

Gene sequence:

>2067_bases
ATGACCAAGGAAGGCGAAGAGGGTCGGCGCGGGATGGGGCCGGAGACCCCGGCGAGCGAGGGACGCCGCCGCACCCTGGC
CTCGGCCCTGCGCGAAGAGGATCGCACCGGGGCCACGGCCTGGCCGCAGACCGAGGAGGGCGAGCCCGGATCCCCGCGCG
ACGCTGGCGCCGGCGAGGGGGGCGTTGTGCCCACGCCCTTGCTGCGGCTGTCTTCGGCCCTGGCCCGGCGGATGGGCGGC
GCCCCCCTCGCCCCGACCCTTGGCCAATCCCTGGAACTGGCCATGGCCGATCACGCCGACGATGAAAAGGCCGACTCCCT
GGCCCATTCGGCCCCGCCACCACCGACGACCGCGCGCCGCGCCGCCGCGCCGCCGGCCCTGGTGCCGGCGCTGGGGTTGG
GCGATCAGCTGCTGGCCGGCGGGTTGATCTCACGCGATCAGATGCGGGTGGCCCATATCGAACAAAAGCGCTCCGGGGCG
CCCTTGGGGCAGGTTCTGGTCGATCTTGGGTTCATCACCGATGGCGTGCTGGCCGAGGTGCTGGCCCAAAGCAGCGGTCA
CGACCGCTTTGACGCCGCGTCGACGCTTGCCGATCCGGCGGCCCTGGCGCCCTTGCCCGAACGCGAGGCCCGGCGTTTGC
GGGTGTTCCCCGTCGGCCTGCGCGGCTCGCTGCTGCGCTTGGCCATGGTCGATCCCCTTGATGTGGTGGCGATCGACGAG
GTGCGCCGCCACTATGGCCGCGATGTGCGGATCGAACCGGTGGTGTCGTCGGAGGCCGAGATCGCCCAGGCCATCGATCG
CAGCTATGGCCATGTCCTGGCCCTTGATGGCGTGCTGCGCGAGCTTGAAACCCTGGGGGCGGCCGGCGCCGATCCGGAAA
GCTTGCGTGATACCGACTCCCACCCGGTGGTGCGGCTGGTCAACGCCCTGCTGCTCGACGCCGTCAAGCGCCGGGCCTCG
GATCTGCATTTCGAGCCCCAAGGGGCCTTTTTGCGGGTGCGCCTGCGCATCGACGGCACGCTGAGCCAGACGCTGATCTT
CCATAAGCAATATTGGCCGGCGGTGGCCCAGCGCCTGAAGATCCTGGCCGGAATGAACATCGCCGACCGCCTGGGGCCCC
AGGATGGCCGGTTCTCGATGGCTATCGCCCACCGCAAGATCGACTTCCGCGCCTCGGTCATCCCCACTGTCCATGGCGAG
AACATGGTGCTGCGCGTGCTCGATCGCTCGGCCACCCCGCTCAAGCTCGAGCAACTGGCCTTGGCCCATGGCACGCTCGA
TCCCCTGGAACTGCTGGTCCGCCGGCCCGAAGGCCTGCTGTTGGTCACCGGCCCCACCGGTTCGGGCAAGACCACCACGC
TTTACGCCTTGATGGACCATATCAGCGGCCCCGAGATCACCATCGTCACCTTGGAGGATCCGGTCGAATACGACCTGCCG
CTGCTGCGTCAGACCCAGGTGCGCGAAGGGGCGCGGCTGGGCTTCGCCGATGGCATCCGCGCCCTGCTGCGCCAGGATCC
CGATGTCATGCTGGTCGGCGAGATCCGCGATGCCGATACCGCCGCCATGGCCCTGCGCGCGGCGATGACCGGCCATCAGG
TCTATGCGACGCTGCACGCCAATGACGCGCCTTCGGCCCTGCCGCGGCTGATGGATCTGGGGCTGCGGCCGGGGCTGCTC
GCCGGCTCGCTGATCGGCGTTCTCGCCCAGCGTCTGGTGCGCCGCCTGTGTCCGCACTGCCGGCAGAGCTATCGCGCCTC
GCCGGTGGAATGCAAGATCCTGGGCCTTGATGCCACGGATCCGCCCGAGATCTTCCGGGCGCGCGGCTGCGAGGCCTGCG
GTCAAACCGGCTATCACGGCCGGGTGCCGATCAGCGAATTGCTGAGCATTAGCCCCGAGATCGACGACCTCATCGCCAGC
GCCGCGCCCTTGGCCGAGATCCGCGCCCTGGCGACCCGTCAGGGCTATCGGCCGATGCTCGATGACGGGGCGCGGCTGGT
CTGCGAGGGGGTGATCGATGTGGCGGCGCTGATGCGCGCCATCGACGTGACCCGCCGGCTGGCCTGA

Upstream 100 bases:

>100_bases
TTGTTTTTGCAGTGACGGCCCGTCGCCGGGGCTGGCGGCGGTGGGGGGAAGATGGAAAACTAACGGCCGATGACATCGGG
GACGTCAAAAGGAGGCCGGC

Downstream 100 bases:

>100_bases
TGACGCTTTACGCCTATCGCGCCGTCAACGCCCGGGGCCGGGTGGTGCGCGGGCGATTGGAGGCCGAGGGCGAAGGCGCC
CTTCAGCGCGGCCTGCTGGG

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MTKEGEEGRRGMGPETPASEGRRRTLASALREEDRTGATAWPQTEEGEPGSPRDAGAGEGGVVPTPLLRLSSALARRMGG
APLAPTLGQSLELAMADHADDEKADSLAHSAPPPPTTARRAAAPPALVPALGLGDQLLAGGLISRDQMRVAHIEQKRSGA
PLGQVLVDLGFITDGVLAEVLAQSSGHDRFDAASTLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVDPLDVVAIDE
VRRHYGRDVRIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLRDTDSHPVVRLVNALLLDAVKRRAS
DLHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLKILAGMNIADRLGPQDGRFSMAIAHRKIDFRASVIPTVHGE
NMVLRVLDRSATPLKLEQLALAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLP
LLRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHANDAPSALPRLMDLGLRPGLL
AGSLIGVLAQRLVRRLCPHCRQSYRASPVECKILGLDATDPPEIFRARGCEACGQTGYHGRVPISELLSISPEIDDLIAS
AAPLAEIRALATRQGYRPMLDDGARLVCEGVIDVAALMRAIDVTRRLA

Sequences:

>Translated_688_residues
MTKEGEEGRRGMGPETPASEGRRRTLASALREEDRTGATAWPQTEEGEPGSPRDAGAGEGGVVPTPLLRLSSALARRMGG
APLAPTLGQSLELAMADHADDEKADSLAHSAPPPPTTARRAAAPPALVPALGLGDQLLAGGLISRDQMRVAHIEQKRSGA
PLGQVLVDLGFITDGVLAEVLAQSSGHDRFDAASTLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVDPLDVVAIDE
VRRHYGRDVRIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLRDTDSHPVVRLVNALLLDAVKRRAS
DLHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLKILAGMNIADRLGPQDGRFSMAIAHRKIDFRASVIPTVHGE
NMVLRVLDRSATPLKLEQLALAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLP
LLRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHANDAPSALPRLMDLGLRPGLL
AGSLIGVLAQRLVRRLCPHCRQSYRASPVECKILGLDATDPPEIFRARGCEACGQTGYHGRVPISELLSISPEIDDLIAS
AAPLAEIRALATRQGYRPMLDDGARLVCEGVIDVAALMRAIDVTRRLA
>Mature_687_residues
TKEGEEGRRGMGPETPASEGRRRTLASALREEDRTGATAWPQTEEGEPGSPRDAGAGEGGVVPTPLLRLSSALARRMGGA
PLAPTLGQSLELAMADHADDEKADSLAHSAPPPPTTARRAAAPPALVPALGLGDQLLAGGLISRDQMRVAHIEQKRSGAP
LGQVLVDLGFITDGVLAEVLAQSSGHDRFDAASTLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVDPLDVVAIDEV
RRHYGRDVRIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLRDTDSHPVVRLVNALLLDAVKRRASD
LHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLKILAGMNIADRLGPQDGRFSMAIAHRKIDFRASVIPTVHGEN
MVLRVLDRSATPLKLEQLALAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLPL
LRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHANDAPSALPRLMDLGLRPGLLA
GSLIGVLAQRLVRRLCPHCRQSYRASPVECKILGLDATDPPEIFRARGCEACGQTGYHGRVPISELLSISPEIDDLIASA
APLAEIRALATRQGYRPMLDDGARLVCEGVIDVAALMRAIDVTRRLA

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=426, Percent_Identity=41.0798122065728, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1786296, Length=382, Percent_Identity=38.4816753926702, Blast_Score=257, Evalue=2e-69,
Organism=Escherichia coli, GI87082188, Length=274, Percent_Identity=38.6861313868613, Blast_Score=115, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 73835; Mature: 73704

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEGEEGRRGMGPETPASEGRRRTLASALREEDRTGATAWPQTEEGEPGSPRDAGAGEG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GVVPTPLLRLSSALARRMGGAPLAPTLGQSLELAMADHADDEKADSLAHSAPPPPTTARR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHCCCCCCCCCCHH
AAAPPALVPALGLGDQLLAGGLISRDQMRVAHIEQKRSGAPLGQVLVDLGFITDGVLAEV
CCCCCHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAQSSGHDRFDAASTLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVDPLDVVAIDE
HHHCCCCCCHHHHHHHCCCHHCCCCCHHHCCEEEEEEECCCCHHHHHHHCCCCHHHHHHH
VRRHYGRDVRIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLRDTDS
HHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCHHHHCCCCC
HPVVRLVNALLLDAVKRRASDLHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
ILAGMNIADRLGPQDGRFSMAIAHRKIDFRASVIPTVHGENMVLRVLDRSATPLKLEQLA
HHHCCCHHHHCCCCCCCEEEEEEHHEECCCEEECCEECCCCCEEEEECCCCCCHHHHHHH
LAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLP
HHCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
LLRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
NDAPSALPRLMDLGLRPGLLAGSLIGVLAQRLVRRLCPHCRQSYRASPVECKILGLDATD
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PPEIFRARGCEACGQTGYHGRVPISELLSISPEIDDLIASAAPLAEIRALATRQGYRPML
CHHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCH
DDGARLVCEGVIDVAALMRAIDVTRRLA
HCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKEGEEGRRGMGPETPASEGRRRTLASALREEDRTGATAWPQTEEGEPGSPRDAGAGEG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GVVPTPLLRLSSALARRMGGAPLAPTLGQSLELAMADHADDEKADSLAHSAPPPPTTARR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCHHHHHHHCCCCCCCCCCHH
AAAPPALVPALGLGDQLLAGGLISRDQMRVAHIEQKRSGAPLGQVLVDLGFITDGVLAEV
CCCCCHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAQSSGHDRFDAASTLADPAALAPLPEREARRLRVFPVGLRGSLLRLAMVDPLDVVAIDE
HHHCCCCCCHHHHHHHCCCHHCCCCCHHHCCEEEEEEECCCCHHHHHHHCCCCHHHHHHH
VRRHYGRDVRIEPVVSSEAEIAQAIDRSYGHVLALDGVLRELETLGAAGADPESLRDTDS
HHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCHHHHCCCCC
HPVVRLVNALLLDAVKRRASDLHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
ILAGMNIADRLGPQDGRFSMAIAHRKIDFRASVIPTVHGENMVLRVLDRSATPLKLEQLA
HHHCCCHHHHCCCCCCCEEEEEEHHEECCCEEECCEECCCCCEEEEECCCCCCHHHHHHH
LAHGTLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEITIVTLEDPVEYDLP
HHCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
LLRQTQVREGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYATLHA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
NDAPSALPRLMDLGLRPGLLAGSLIGVLAQRLVRRLCPHCRQSYRASPVECKILGLDATD
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PPEIFRARGCEACGQTGYHGRVPISELLSISPEIDDLIASAAPLAEIRALATRQGYRPML
CHHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCH
DDGARLVCEGVIDVAALMRAIDVTRRLA
HCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]