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The map label for this gene is tapC [H]

Identifier: 83591454

GI number: 83591454

Start: 133573

End: 134808

Strand: Direct

Name: tapC [H]

Synonym: Rru_A0114

Alternate gene names: 83591454

Gene position: 133573-134808 (Clockwise)

Preceding gene: 83591453

Following gene: 83591455

Centisome position: 3.07

GC content: 71.6

Gene sequence:

>1236_bases
ATGACGCTTTACGCCTATCGCGCCGTCAACGCCCGGGGCCGGGTGGTGCGCGGGCGATTGGAGGCCGAGGGCGAAGGCGC
CCTTCAGCGCGGCCTGCTGGGCGCCGGGCTGCATCTGTTGGCGGCCCGCCCGGCAAGCCGGCCCGATCGGCGGGGGCCGC
TGGCCTGGATCGGCGGGCTGGTCGGGCGGCGCGGCGCCATCGCCGAGCGCGAGCTTCAACAGTTGTTCCTGCATCTCGAC
CGCGCCCTGGGCGCCGGGGTGCCGCTGCTCGAAGCCCTTGATGATATCGGCGAGGTGACCGGCGACGGTCGGCTGCGGAT
GATCTTGCGGCGGGTGCGCGGCGATCTGTCCCAGGGCCTCGCGCTGTCGGACGCGCTGGGGCGGCACGAGCGGGCTCTGG
GGCCGATGGTCGCCCCCGTGGTGCGGGCCGGCGAGGAAAGCGGCGATCTGGGCGGCGCCTTCGGCCCTCTGGTTGCCCAC
CTGCGCTGGCGCGAGGATCTGGGGCGGCGGCTGCGCAAGGCCACGCGCTACCCCCTCGTCGTTCTTGGCGCCATCGCCTT
GCTGTTCGTTTTCCTGATGGCGGTGGTGGTACCCGATCTCGCCAGCTTCCTCGGCGGTTTGGGCGAGGGCCTGCCGCCGC
AGACCCGGGCGCTGATCGGGCTGTCGGGGCTGATCGTCGACCATGCCTTCGCCTTGGGCTTTCTGGCCCTTGCCGGCCTT
CTCGCGCCCGGTCTGGCGCGGCGGATGTCCGATGAAGCCGCCTATCGCCTGGATGCCTGGATCCTTGCCTTGCCGCTGGG
CGGACCGCTGATCCGGCGTATCGCGCTCTCGCGCTTTTGCCATTTCTTCGCCCTGATGGTCGGCGCCGGGGTGCCGCTGG
CGGTCTGCCTTGCCACCGCGCGCGGCGTTCTGGGCAATCGCTGCCTGGCCGAGGCCCTGGATACGGCGACGGCGGCGGTC
ACCGCCGGTCATCCGCTGTCCGATGCCCTGCGGCTTTCGGGGCAGTTTCCGCCGCTGGTCACCCGCATGGTGCGCATCGG
CGAGGATGGCGGCGATCTGGCCGGGGCCCTGGGCCATGTCAGCGCCTTCCATGACGGCGATGTCGCCGAGGCCACCGACC
GGCTGATCGGCTTGCTTGAACCCGCCTTGCTGTTGGTCGCGGGCGGTCTGCTGGGCTGGATCGTCTGGGCGGTGCTGCTG
CCGGTCTATGACAGCCTGATCGTCTTGGCCGGTTGA

Upstream 100 bases:

>100_bases
ATCGGCCGATGCTCGATGACGGGGCGCGGCTGGTCTGCGAGGGGGTGATCGATGTGGCGGCGCTGATGCGCGCCATCGAC
GTGACCCGCCGGCTGGCCTG

Downstream 100 bases:

>100_bases
ATACTGCACGTTTTAATTGATAAAGCCGTGATTCCTGGTCTTATAGGATGCTAGTCCTGGGGAGGAGGCGGCGATTTGAC
GGAGGGGGTGGCGAGGGCCC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTLYAYRAVNARGRVVRGRLEAEGEGALQRGLLGAGLHLLAARPASRPDRRGPLAWIGGLVGRRGAIAERELQQLFLHLD
RALGAGVPLLEALDDIGEVTGDGRLRMILRRVRGDLSQGLALSDALGRHERALGPMVAPVVRAGEESGDLGGAFGPLVAH
LRWREDLGRRLRKATRYPLVVLGAIALLFVFLMAVVVPDLASFLGGLGEGLPPQTRALIGLSGLIVDHAFALGFLALAGL
LAPGLARRMSDEAAYRLDAWILALPLGGPLIRRIALSRFCHFFALMVGAGVPLAVCLATARGVLGNRCLAEALDTATAAV
TAGHPLSDALRLSGQFPPLVTRMVRIGEDGGDLAGALGHVSAFHDGDVAEATDRLIGLLEPALLLVAGGLLGWIVWAVLL
PVYDSLIVLAG

Sequences:

>Translated_411_residues
MTLYAYRAVNARGRVVRGRLEAEGEGALQRGLLGAGLHLLAARPASRPDRRGPLAWIGGLVGRRGAIAERELQQLFLHLD
RALGAGVPLLEALDDIGEVTGDGRLRMILRRVRGDLSQGLALSDALGRHERALGPMVAPVVRAGEESGDLGGAFGPLVAH
LRWREDLGRRLRKATRYPLVVLGAIALLFVFLMAVVVPDLASFLGGLGEGLPPQTRALIGLSGLIVDHAFALGFLALAGL
LAPGLARRMSDEAAYRLDAWILALPLGGPLIRRIALSRFCHFFALMVGAGVPLAVCLATARGVLGNRCLAEALDTATAAV
TAGHPLSDALRLSGQFPPLVTRMVRIGEDGGDLAGALGHVSAFHDGDVAEATDRLIGLLEPALLLVAGGLLGWIVWAVLL
PVYDSLIVLAG
>Mature_410_residues
TLYAYRAVNARGRVVRGRLEAEGEGALQRGLLGAGLHLLAARPASRPDRRGPLAWIGGLVGRRGAIAERELQQLFLHLDR
ALGAGVPLLEALDDIGEVTGDGRLRMILRRVRGDLSQGLALSDALGRHERALGPMVAPVVRAGEESGDLGGAFGPLVAHL
RWREDLGRRLRKATRYPLVVLGAIALLFVFLMAVVVPDLASFLGGLGEGLPPQTRALIGLSGLIVDHAFALGFLALAGLL
APGLARRMSDEAAYRLDAWILALPLGGPLIRRIALSRFCHFFALMVGAGVPLAVCLATARGVLGNRCLAEALDTATAAVT
AGHPLSDALRLSGQFPPLVTRMVRIGEDGGDLAGALGHVSAFHDGDVAEATDRLIGLLEPALLLVAGGLLGWIVWAVLLP
VYDSLIVLAG

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=405, Percent_Identity=27.4074074074074, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786295, Length=321, Percent_Identity=26.791277258567, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43175; Mature: 43044

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYAYRAVNARGRVVRGRLEAEGEGALQRGLLGAGLHLLAARPASRPDRRGPLAWIGGL
CCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VGRRGAIAERELQQLFLHLDRALGAGVPLLEALDDIGEVTGDGRLRMILRRVRGDLSQGL
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
ALSDALGRHERALGPMVAPVVRAGEESGDLGGAFGPLVAHLRWREDLGRRLRKATRYPLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLGAIALLFVFLMAVVVPDLASFLGGLGEGLPPQTRALIGLSGLIVDHAFALGFLALAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPGLARRMSDEAAYRLDAWILALPLGGPLIRRIALSRFCHFFALMVGAGVPLAVCLATA
HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RGVLGNRCLAEALDTATAAVTAGHPLSDALRLSGQFPPLVTRMVRIGEDGGDLAGALGHV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SAFHDGDVAEATDRLIGLLEPALLLVAGGLLGWIVWAVLLPVYDSLIVLAG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLYAYRAVNARGRVVRGRLEAEGEGALQRGLLGAGLHLLAARPASRPDRRGPLAWIGGL
CEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VGRRGAIAERELQQLFLHLDRALGAGVPLLEALDDIGEVTGDGRLRMILRRVRGDLSQGL
HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
ALSDALGRHERALGPMVAPVVRAGEESGDLGGAFGPLVAHLRWREDLGRRLRKATRYPLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLGAIALLFVFLMAVVVPDLASFLGGLGEGLPPQTRALIGLSGLIVDHAFALGFLALAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPGLARRMSDEAAYRLDAWILALPLGGPLIRRIALSRFCHFFALMVGAGVPLAVCLATA
HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RGVLGNRCLAEALDTATAAVTAGHPLSDALRLSGQFPPLVTRMVRIGEDGGDLAGALGHV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH
SAFHDGDVAEATDRLIGLLEPALLLVAGGLLGWIVWAVLLPVYDSLIVLAG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]