| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313500
Identifier: 83313500
GI number: 83313500
Start: 4805894
End: 4806379
Strand: Reverse
Name: 83313500
Synonym: amb4401
Alternate gene names: NA
Gene position: 4806379-4805894 (Counterclockwise)
Preceding gene: 83313501
Following gene: 83313497
Centisome position: 96.76
GC content: 63.79
Gene sequence:
>486_bases ATGACCATTGCGTGGCGTGAGGCCATGAGCGTGGGCGACGAGACCATCGATGCGGATCACCGGCATCTGGTCGACATGAT CAACGTCTTCGAGGCTGCCGTGGTCGGCAAGATCGACCACAAGCGGGTCGCCCGCGTGCTGCTGGGGCTGGTGGAATACA CCGGCGCCCATTTCAAGCGCGAGGAAGAGATCCAGGTGCTGATCCGCTACCCCTACCATGATTCCCACCGCCATGGGCAC CGGGACGTTCTCAAGCAGCTGACGGGAATCGCCCAGCAATACACCCAGGCCACCGGGACGGCCCGTGACGAGATGATCCG CGGGCTGGGCGGCTTTCTACGCGAATGGCTGGTCGATCACATCATCCAGTCCGATCTGCGCATGAAGCCCTATGTGCTGA AGTATCAGGCCGAGACCCAGGACGCCAAGAAGCGCCAGCGCGCCGCCGTCGCCCTGTCCGAGCAGATCGCCGGGGTGGGG CACTGA
Upstream 100 bases:
>100_bases TATCGCTGCCATCGGTAGAACTTTACCGAAATGGATATGGCCCCAGTTGTCGCGCCCCGGCTATCCTCTTTGAGGGGTGG GCCAGAAAAGGGGCGAGGCC
Downstream 100 bases:
>100_bases GGGCGAAGGGGGTCATCATCGACACCCCCCGACAGGAAAAAGCCCCCGCCGGTCTCCCGGCGGGGGCTTTGCCTTGATCA GGTTCCGTCGGTTCAGACGG
Product: hemerythrin-like protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Sensory Transducer; Hemerythrin; Hemerythrin Family Protein; Methyl-Accepting Chemotaxis Protein; Hemerythrin-Related Protein; Sensory Box Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGH RDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVG H
Sequences:
>Translated_161_residues MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGH RDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVG H >Mature_160_residues TIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKREEEIQVLIRYPYHDSHRHGHR DVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDHIIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH
Specific function: Unknown
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18409; Mature: 18278
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKR CCCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC EEEIQVLIRYPYHDSHRHGHRDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDH HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIAWREAMSVGDETIDADHRHLVDMINVFEAAVVGKIDHKRVARVLLGLVEYTGAHFKR CCCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC EEEIQVLIRYPYHDSHRHGHRDVLKQLTGIAQQYTQATGTARDEMIRGLGGFLREWLVDH HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IIQSDLRMKPYVLKYQAETQDAKKRQRAAVALSEQIAGVGH HHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA