| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313438
Identifier: 83313438
GI number: 83313438
Start: 4743716
End: 4744912
Strand: Reverse
Name: 83313438
Synonym: amb4339
Alternate gene names: NA
Gene position: 4744912-4743716 (Counterclockwise)
Preceding gene: 83313439
Following gene: 83313432
Centisome position: 95.53
GC content: 66.58
Gene sequence:
>1197_bases ATGCCCGGACACAAGTCGGCAAAGACAGGGAAGACTGGTCCAGCGACCCGATGGTCCAATGCGGATCCGGGGATCGAGGC CATCCGCGCCGCGCTGGAGGGTCCGGTGATCGAGGTGCTGCGCAAGGAAGTGCTGGCGCTCAAGGGGCTGCCGCGCAACG CCGCCTACGACAAGGCCATGAACGACCCCAAGATGCTCGACGAATGTCTGCGCCTGTTCCGGACCCGGCCGGAGCTGTTC GCCAATGTGGTGACCGATGCGGCGAAGCAGCCGATCACTGCCGACCATGACGTGCTGGCCTGTGGCCGCACCTTGGCCGA GGCGGTGGCTCTTGTGGTGCGCGCTTCGGCGCGCCGCTATTTCCGCGCCAAGTTGGATTTCCGCTCCAAGTTTCAGGCTC CGCCGCCCAAGCTGTCCCTGATGAAGCGCATGGGTCTGGCCCTGGGTCTGGCTCATCCGACGCCGGTCCACAAGCATGCG GCCAAGCCCCACGCCCGTTCGGAGGCCCTGTATCAGGTGATCCGCGATTACCTGCGCTTTGACTGGCAGGTCATGCTGAT CCCCCATTACACCCCCATGAGTCCCTCGCTGGTCAGCGATCTGGGCTCGCGCCTGCTCGACATCCGCGAGGCCGCCGAGT TGCAGGCGCTCAGCGCGCCGGGCAACGTGCCGCGCGATGGGCGGGTGCCGCTGCTGCTCGATGACGCCAAGCGGCTGATG GTGCCCGGCAAGGAGGTCATCGAGTCCGAGATCCTGTGGCGGGTGGTGCAGCAGATGGATCTGGCCCGTCTGTTCCCCAG TTCCGAGACCTCGCTGATCCGCCGTGCCGTCTCCCAGGTGTCGAACACCCATGTGGACGTGATCCGGTCGCTGCTGCCGG TGCTGGGCGGCGACATCCGGCGCTTCACCGCCTTTCTGATGATCGCCTTCACCACCCTGGGCGAGCAGCGCTTCAAGCAG GATTTCTGCCAGACCGGACAGGTCCACGCGGCGCGCAAGCTGGCCGACCGCCTGACCAACGCCGAAACGCCGCCGCCTTG CCTGGACGACATGAAGCGGGTCTATTCCGCCTTGCTGTCCACCGCCTATGTGGGCGGTGTCGAAGCCGGGCCGTCGCGCC TGGAATCCCAGCCCCGGCTGAAGAAGGCGCTGGAGGCCCTGGGGCCGACCTCCAAGCCGGTCTCCATTTCAGGCTGA
Upstream 100 bases:
>100_bases ATGTGATATAAGTGATCACTCCTTTATATGTGTTGATTTCTCCTGTTTACAGGCGCACCGTGAATGGGTTGTGAATGCGT AGACTTGAGATGTGAACAGC
Downstream 100 bases:
>100_bases TATGGCGACGGGGCTCCCGCCCCGGTCCCCGGCAGGAGGCGATGCCTCCAGACCACCCTTTTATTCATGACTCAAAAATG GGGTCCGGGGCATTGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPGHKSAKTGKTGPATRWSNADPGIEAIRAALEGPVIEVLRKEVLALKGLPRNAAYDKAMNDPKMLDECLRLFRTRPELF ANVVTDAAKQPITADHDVLACGRTLAEAVALVVRASARRYFRAKLDFRSKFQAPPPKLSLMKRMGLALGLAHPTPVHKHA AKPHARSEALYQVIRDYLRFDWQVMLIPHYTPMSPSLVSDLGSRLLDIREAAELQALSAPGNVPRDGRVPLLLDDAKRLM VPGKEVIESEILWRVVQQMDLARLFPSSETSLIRRAVSQVSNTHVDVIRSLLPVLGGDIRRFTAFLMIAFTTLGEQRFKQ DFCQTGQVHAARKLADRLTNAETPPPCLDDMKRVYSALLSTAYVGGVEAGPSRLESQPRLKKALEALGPTSKPVSISG
Sequences:
>Translated_398_residues MPGHKSAKTGKTGPATRWSNADPGIEAIRAALEGPVIEVLRKEVLALKGLPRNAAYDKAMNDPKMLDECLRLFRTRPELF ANVVTDAAKQPITADHDVLACGRTLAEAVALVVRASARRYFRAKLDFRSKFQAPPPKLSLMKRMGLALGLAHPTPVHKHA AKPHARSEALYQVIRDYLRFDWQVMLIPHYTPMSPSLVSDLGSRLLDIREAAELQALSAPGNVPRDGRVPLLLDDAKRLM VPGKEVIESEILWRVVQQMDLARLFPSSETSLIRRAVSQVSNTHVDVIRSLLPVLGGDIRRFTAFLMIAFTTLGEQRFKQ DFCQTGQVHAARKLADRLTNAETPPPCLDDMKRVYSALLSTAYVGGVEAGPSRLESQPRLKKALEALGPTSKPVSISG >Mature_397_residues PGHKSAKTGKTGPATRWSNADPGIEAIRAALEGPVIEVLRKEVLALKGLPRNAAYDKAMNDPKMLDECLRLFRTRPELFA NVVTDAAKQPITADHDVLACGRTLAEAVALVVRASARRYFRAKLDFRSKFQAPPPKLSLMKRMGLALGLAHPTPVHKHAA KPHARSEALYQVIRDYLRFDWQVMLIPHYTPMSPSLVSDLGSRLLDIREAAELQALSAPGNVPRDGRVPLLLDDAKRLMV PGKEVIESEILWRVVQQMDLARLFPSSETSLIRRAVSQVSNTHVDVIRSLLPVLGGDIRRFTAFLMIAFTTLGEQRFKQD FCQTGQVHAARKLADRLTNAETPPPCLDDMKRVYSALLSTAYVGGVEAGPSRLESQPRLKKALEALGPTSKPVSISG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43852; Mature: 43720
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGHKSAKTGKTGPATRWSNADPGIEAIRAALEGPVIEVLRKEVLALKGLPRNAAYDKAM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCC NDPKMLDECLRLFRTRPELFANVVTDAAKQPITADHDVLACGRTLAEAVALVVRASARRY CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FRAKLDFRSKFQAPPPKLSLMKRMGLALGLAHPTPVHKHAAKPHARSEALYQVIRDYLRF HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHC DWQVMLIPHYTPMSPSLVSDLGSRLLDIREAAELQALSAPGNVPRDGRVPLLLDDAKRLM CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHH VPGKEVIESEILWRVVQQMDLARLFPSSETSLIRRAVSQVSNTHVDVIRSLLPVLGGDIR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHH RFTAFLMIAFTTLGEQRFKQDFCQTGQVHAARKLADRLTNAETPPPCLDDMKRVYSALLS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TAYVGGVEAGPSRLESQPRLKKALEALGPTSKPVSISG HHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PGHKSAKTGKTGPATRWSNADPGIEAIRAALEGPVIEVLRKEVLALKGLPRNAAYDKAM CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCC NDPKMLDECLRLFRTRPELFANVVTDAAKQPITADHDVLACGRTLAEAVALVVRASARRY CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FRAKLDFRSKFQAPPPKLSLMKRMGLALGLAHPTPVHKHAAKPHARSEALYQVIRDYLRF HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHC DWQVMLIPHYTPMSPSLVSDLGSRLLDIREAAELQALSAPGNVPRDGRVPLLLDDAKRLM CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHH VPGKEVIESEILWRVVQQMDLARLFPSSETSLIRRAVSQVSNTHVDVIRSLLPVLGGDIR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHH RFTAFLMIAFTTLGEQRFKQDFCQTGQVHAARKLADRLTNAETPPPCLDDMKRVYSALLS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TAYVGGVEAGPSRLESQPRLKKALEALGPTSKPVSISG HHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA