| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313415
Identifier: 83313415
GI number: 83313415
Start: 4721553
End: 4722332
Strand: Reverse
Name: 83313415
Synonym: amb4316
Alternate gene names: NA
Gene position: 4722332-4721553 (Counterclockwise)
Preceding gene: 83313416
Following gene: 83313414
Centisome position: 95.07
GC content: 66.79
Gene sequence:
>780_bases ATGAGCCTGTTCGTCAAGACCGCCTGCCTGGGTGCCGCGGCCGTGCTGTTGTGCGTCTCGCCGGTTCTGGCTCAGGGCAG CCTGATGGACCTGGGCAAGGGGATGATCAAGCAGGAACTGGAGCAGCGGGCCGGCGGCTCGTCGTCGTCCGGCGCGGGCT CGTCCCTGTCTACCTCGGAAATCGGCTCGGGCCTTAAGGAGGCCCTGCGGGTCGCCGCCGACAAGGTCACCGGCCAGCTG GGCCGCACCGACGGCTTCAACGCCGATTCCAGCGTGCATATCCCTCTGCCCGACAAGCTGGCCAAGGTAAAGCAGGGGCT GGCCCTGGTCGGCAAGTCGCAGATGGCCGACGACCTGGAGCTGAAGCTCAACCGCGCCGCCGAGGCTGCCACCCCTAAGG CCAAGCAGATATTCTGGGACGCGGTGCAGAAGATGACCCTGGACGATGCGCGGGGCATCCTGAACGGCCCCAAGGATGCC GCCACCCAGTATTTCAAGCGGACCATGAGTCCCGACCTGCGCACCGCCATGCGGCCGGTGGTGGACAACACCGTCTCGCA ATCGGGCGCGGTGCAGTCCTATACCAGCATGGCCGGCGCCGCCCAGGGCCTGCCCATGGTGGGCGACGCCCTGAAGGCCG GCCCCTCCATGCTGACCGACCATGTGCTGGATTATGCCCTGTCGGGCATCTTCAGCTATCTCGGCCAGGAAGAGGCGTCC ATCCGCACCAACCCGGCCAGCCGCTCCACCGACCTGCTGAAGAAGGTATTCGGCGGCTGA
Upstream 100 bases:
>100_bases TCGCCGCCACCCTGGATTCCGGTTCGGGTCATGGCGGCACCCTGACCGCCGCCTGCTTCGGCGCCGACGGCGCCATACTG CACATCCTGGAGGCCTGACA
Downstream 100 bases:
>100_bases GTGATCGCCGGGCTGCCGCCCGGACCCGCTCGGAGGGAACCCTCCGAACCTCCTTTGATTTTGAAAATAAGGGGAGGGTT CGGGAGGCATGCCTCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSLFVKTACLGAAAVLLCVSPVLAQGSLMDLGKGMIKQELEQRAGGSSSSGAGSSLSTSEIGSGLKEALRVAADKVTGQL GRTDGFNADSSVHIPLPDKLAKVKQGLALVGKSQMADDLELKLNRAAEAATPKAKQIFWDAVQKMTLDDARGILNGPKDA ATQYFKRTMSPDLRTAMRPVVDNTVSQSGAVQSYTSMAGAAQGLPMVGDALKAGPSMLTDHVLDYALSGIFSYLGQEEAS IRTNPASRSTDLLKKVFGG
Sequences:
>Translated_259_residues MSLFVKTACLGAAAVLLCVSPVLAQGSLMDLGKGMIKQELEQRAGGSSSSGAGSSLSTSEIGSGLKEALRVAADKVTGQL GRTDGFNADSSVHIPLPDKLAKVKQGLALVGKSQMADDLELKLNRAAEAATPKAKQIFWDAVQKMTLDDARGILNGPKDA ATQYFKRTMSPDLRTAMRPVVDNTVSQSGAVQSYTSMAGAAQGLPMVGDALKAGPSMLTDHVLDYALSGIFSYLGQEEAS IRTNPASRSTDLLKKVFGG >Mature_258_residues SLFVKTACLGAAAVLLCVSPVLAQGSLMDLGKGMIKQELEQRAGGSSSSGAGSSLSTSEIGSGLKEALRVAADKVTGQLG RTDGFNADSSVHIPLPDKLAKVKQGLALVGKSQMADDLELKLNRAAEAATPKAKQIFWDAVQKMTLDDARGILNGPKDAA TQYFKRTMSPDLRTAMRPVVDNTVSQSGAVQSYTSMAGAAQGLPMVGDALKAGPSMLTDHVLDYALSGIFSYLGQEEASI RTNPASRSTDLLKKVFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26979; Mature: 26848
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFVKTACLGAAAVLLCVSPVLAQGSLMDLGKGMIKQELEQRAGGSSSSGAGSSLSTSE CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH IGSGLKEALRVAADKVTGQLGRTDGFNADSSVHIPLPDKLAKVKQGLALVGKSQMADDLE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LKLNRAAEAATPKAKQIFWDAVQKMTLDDARGILNGPKDAATQYFKRTMSPDLRTAMRPV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH VDNTVSQSGAVQSYTSMAGAAQGLPMVGDALKAGPSMLTDHVLDYALSGIFSYLGQEEAS HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH IRTNPASRSTDLLKKVFGG CCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SLFVKTACLGAAAVLLCVSPVLAQGSLMDLGKGMIKQELEQRAGGSSSSGAGSSLSTSE CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH IGSGLKEALRVAADKVTGQLGRTDGFNADSSVHIPLPDKLAKVKQGLALVGKSQMADDLE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LKLNRAAEAATPKAKQIFWDAVQKMTLDDARGILNGPKDAATQYFKRTMSPDLRTAMRPV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH VDNTVSQSGAVQSYTSMAGAAQGLPMVGDALKAGPSMLTDHVLDYALSGIFSYLGQEEAS HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH IRTNPASRSTDLLKKVFGG CCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA