| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is gluQ [H]
Identifier: 83313411
GI number: 83313411
Start: 4717363
End: 4718196
Strand: Reverse
Name: gluQ [H]
Synonym: amb4312
Alternate gene names: 83313411
Gene position: 4718196-4717363 (Counterclockwise)
Preceding gene: 83313414
Following gene: 83313407
Centisome position: 94.99
GC content: 70.38
Gene sequence:
>834_bases GTGACCATCACCCGCTTCGCCCCCAGTCCCACCGGGGAACTGCATCTGGGCCACGCCCATTCCGCCCTGTTCGCCTTTGC CGCGGCAAAGGCGGCGGGGGGGCGCTTTCTTTTGCGCATCGAGGACATCGACCGCACCCGCTGTCGCCCCGAGTTCACTC AAGGGATCTTCACCGATCTCGGCTGGCTGGGGCTGGACTGGGAACGGCCCGTGCGCGTCCAGTCGGAGCATTTCGACGAA TACCGCGCCGCGCTGGACCGGCTGGAGGGCATGGGGCTGCTCTATCCCTGCTTTTGCACCCGCAAGGATATCGCCCGCGA GGTCGAGGGTGCCGGCCATGCGCCGCACGGCCCCGATGGGCCGCTTTATCCCGGCCATTGCCGCCATCTGTCGGTGGCCG AACGGCGAGAGCGGCGCGAGGCGGGCCAGGCCTTTGCGTTGCGCCTGGACGTGGCGGCGGCGGCGGCGCGGGTCGGTCCC CTGGCCTGGCATGACCGGGCGCAGGGAGAGCAGACCGCCCAGCCTGAACTGTTCGGCGACGTGGTGCTGGCCCGCAAGGA CATTCCGGCCAGCTACCATCTGGCGGTAACCGTCGACGACGCCCTGCAGGGGGTCACGCTGGTGACCCGAGGCCAGGACC TGTTCGAGGCCACCCATGTGCACCGGCTGTTGCAGGCGCTGCTGGGCCTGCCGGTGCCGGGCTACCTCCATCACCGCCTG CTCACCGACCCGAGCGGGCGGCGTTATGCCAAGCGTGACCGCTCGCTGACGCTGAGGGCCCTGCGCGAGGCGGGCCGCAC CCCGGACGAGGTGCGGTCCCTGGCGGGATTTTGA
Upstream 100 bases:
>100_bases TGATGGGGGACGGACTGGGCATGATGGCTCCTGACGATACGATCTGGAGGCATTATGGTATGGTTCGCCGCCCCTGTCCC GCCAAAGCTCGCGACATATT
Downstream 100 bases:
>100_bases CCAAGCCCGCTTCGCGGCAGGGCACCCACCCTGGCCCGTTCGGAGACACAGCCTCCAACCCTCCAGGCTTTAAAAAACTG AAGGGTCCGGGACACTGTGC
Product: glutamyl- and glutaminyl-tRNA synthetase
Products: AMP; L-Glutamyl-tRNA(Glu); Diphosphate [C]
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTITRFAPSPTGELHLGHAHSALFAFAAAKAAGGRFLLRIEDIDRTRCRPEFTQGIFTDLGWLGLDWERPVRVQSEHFDE YRAALDRLEGMGLLYPCFCTRKDIAREVEGAGHAPHGPDGPLYPGHCRHLSVAERRERREAGQAFALRLDVAAAAARVGP LAWHDRAQGEQTAQPELFGDVVLARKDIPASYHLAVTVDDALQGVTLVTRGQDLFEATHVHRLLQALLGLPVPGYLHHRL LTDPSGRRYAKRDRSLTLRALREAGRTPDEVRSLAGF
Sequences:
>Translated_277_residues MTITRFAPSPTGELHLGHAHSALFAFAAAKAAGGRFLLRIEDIDRTRCRPEFTQGIFTDLGWLGLDWERPVRVQSEHFDE YRAALDRLEGMGLLYPCFCTRKDIAREVEGAGHAPHGPDGPLYPGHCRHLSVAERRERREAGQAFALRLDVAAAAARVGP LAWHDRAQGEQTAQPELFGDVVLARKDIPASYHLAVTVDDALQGVTLVTRGQDLFEATHVHRLLQALLGLPVPGYLHHRL LTDPSGRRYAKRDRSLTLRALREAGRTPDEVRSLAGF >Mature_276_residues TITRFAPSPTGELHLGHAHSALFAFAAAKAAGGRFLLRIEDIDRTRCRPEFTQGIFTDLGWLGLDWERPVRVQSEHFDEY RAALDRLEGMGLLYPCFCTRKDIAREVEGAGHAPHGPDGPLYPGHCRHLSVAERRERREAGQAFALRLDVAAAAARVGPL AWHDRAQGEQTAQPELFGDVVLARKDIPASYHLAVTVDDALQGVTLVTRGQDLFEATHVHRLLQALLGLPVPGYLHHRLL TDPSGRRYAKRDRSLTLRALREAGRTPDEVRSLAGF
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=282, Percent_Identity=31.5602836879433, Blast_Score=117, Evalue=9e-27, Organism=Escherichia coli, GI1788743, Length=268, Percent_Identity=31.3432835820896, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI226510925, Length=262, Percent_Identity=36.2595419847328, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1786895, Length=118, Percent_Identity=36.4406779661017, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71993394, Length=283, Percent_Identity=30.7420494699647, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324540, Length=273, Percent_Identity=30.4029304029304, Blast_Score=130, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324742, Length=128, Percent_Identity=34.375, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24665321, Length=280, Percent_Identity=33.5714285714286, Blast_Score=133, Evalue=1e-31,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: 6.1.1.17 [C]
Molecular weight: Translated: 30726; Mature: 30595
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITRFAPSPTGELHLGHAHSALFAFAAAKAAGGRFLLRIEDIDRTRCRPEFTQGIFTDL CCEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHH GWLGLDWERPVRVQSEHFDEYRAALDRLEGMGLLYPCFCTRKDIAREVEGAGHAPHGPDG CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHCCCCCCCCCCC PLYPGHCRHLSVAERRERREAGQAFALRLDVAAAAARVGPLAWHDRAQGEQTAQPELFGD CCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHH VVLARKDIPASYHLAVTVDDALQGVTLVTRGQDLFEATHVHRLLQALLGLPVPGYLHHRL HHHHHCCCCCCEEEEEEECHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTDPSGRRYAKRDRSLTLRALREAGRTPDEVRSLAGF CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure TITRFAPSPTGELHLGHAHSALFAFAAAKAAGGRFLLRIEDIDRTRCRPEFTQGIFTDL CEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHH GWLGLDWERPVRVQSEHFDEYRAALDRLEGMGLLYPCFCTRKDIAREVEGAGHAPHGPDG CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHCCCCCCCCCCC PLYPGHCRHLSVAERRERREAGQAFALRLDVAAAAARVGPLAWHDRAQGEQTAQPELFGD CCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHH VVLARKDIPASYHLAVTVDDALQGVTLVTRGQDLFEATHVHRLLQALLGLPVPGYLHHRL HHHHHCCCCCCEEEEEEECHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTDPSGRRYAKRDRSLTLRALREAGRTPDEVRSLAGF CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-Glutamate; tRNA (Glu) [C]
Specific reaction: ATP + L-Glutamate + tRNA (Glu) --> AMP + L-Glutamyl-tRNA(Glu) + Diphosphate [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA