| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is baeS [H]
Identifier: 83313399
GI number: 83313399
Start: 4704532
End: 4706016
Strand: Reverse
Name: baeS [H]
Synonym: amb4300
Alternate gene names: 83313399
Gene position: 4706016-4704532 (Counterclockwise)
Preceding gene: 83313400
Following gene: 83313398
Centisome position: 94.74
GC content: 70.03
Gene sequence:
>1485_bases ATGCCTAGACTCGGACTCTGGCGGGGATCCTTCGCCGTCAAGCTGGCCAGCATCGCCCTGATCTTCGCCGTGGTGCCGGT GTTGATCTACCTGCAGCTGGAGACGGTGGAGACCCAGCGCAACGCCCTGATGCTGCGCTTGGCCCAGGAACAGGGAAAGC TGGCGGGCGAGGCGCTGTTCCCCCTGCTGGAGCAGTTCTCGCCGCGCAACGCCGACCGCATCGATCCGGTGGTCAGGCGC CTGGGCGAGGGCGGCATGTCCATCAAGGTGCTGTTCCGGCCGGCCCAGTCCAATGGCGCCCGCAATTTCCTGCTGGTCGC CTCGGCTCCCGAGACCGGGCCGCAACAGGCCCGTCCCGCCATGGACCGGCTGGTGGAGAGCGGCGTGCTTGCCCATCTGG CCGCCAGTTGCGAGGGACGCGCCCCCCTGGCCCTGCGACTGGCCGGAATCCAGGAAGGCGGCGAGCTTCTGACCTATCTG GCCCCCCATGCCACCCGCCTGGGCTGCTGGGTGGTGCTGACCGCCCAGCCCACCGGCACCCTGCCGGAGCAGGTGATCGG CCGTCCCTACTGGCAATCCCCCGACCTTCAGGTGGCGGCCTCCATCTACCTGCTGATGGCGGTGCTGGTGCTGTCCATCT TCACCGACGCCTGGGGCAATCTGCGGCGCTTCCAGGGGGTGGCGCGCTCGGTGGTCCGGGGCGAGGCCAAGGTCTCCTTC GTCGAGGGCAACCGGGTCCCCGAACTGGCCGAGGTGGCCGCCGAGCTGGATTCCATGGTCGCCACCCTCAAGCGCTCGGA AGGCTTGCTGCGCCAGGCGGCGGAGGAGAACGCCCATGCCCTCAAGGCGCCGTTGGCGGTGATCTCCCAATCCCTCGAGC CCCTGGGGCGGGCGGTGGCCCCCGACAATGTCAGGGCGGTGCGTGCCCTCGACCTGATCGGCCAGTCGGTGGAGCGTCTG GACGGGCTGGTCTCCACCATCCGCCGTACCGACGAGACCATCGCCGCCCTGATCGACCGCCCCCGTGACCGGGTCGATGC CTCGGCCCTGCTCAACCGGTTGGGGCGGGGCTATATCCGCATGGCGGCCGAGCGCTCCGTCGGTCTGGACATGGGCGTCG CCGCCGGGCTCTGGATTTCCGGCAGCGACGAGATGCTGGAGGTCATCGCCGAAAACCTGCTGGACAACGCCATCGACTTC TCGCCCCCCGGTGGGCGGATTTCCATGGATCTGCGCCAGGAGAACGGCATGGCGCTGTTGCGGGTGCGCGACAACGGCCC CGGCGTGCCGGAAGGCGAGCTGGAGCGCATCTTCGAGCGCCATGTTTCGCAGCGGGGCAAGGCCGAGGGCGGCCAGGTCG AGCATTACGGCCTGGGCCTGTGGATCGTTCGCCGCAACGCCGAGGCCATGGGCGGCAAGGCCTGGGCCGCCGGCGCCCCC GGTGGCGGCCTGGAGGTCTCGGTCGCTCTGCCGCTGGGCGACTGA
Upstream 100 bases:
>100_bases GCCATCAAGCGCATCCGCGAGAAGTTCAAGACCGTCGATCCGGACTTCGAGCAGATCGGCAATTATCCCGGCTTCGGCTA TGTCTGGCAGGCTGAGCGCG
Downstream 100 bases:
>100_bases GCGTCTCAGTCACAGCTTTATCACAGCCTTCTCACCCCCCGGTTCCGGTCGCCGGCGTATTCCTATCAGGGATGGGCTCG TCCCAGATTTGAAGGAATAA
Product: Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MPRLGLWRGSFAVKLASIALIFAVVPVLIYLQLETVETQRNALMLRLAQEQGKLAGEALFPLLEQFSPRNADRIDPVVRR LGEGGMSIKVLFRPAQSNGARNFLLVASAPETGPQQARPAMDRLVESGVLAHLAASCEGRAPLALRLAGIQEGGELLTYL APHATRLGCWVVLTAQPTGTLPEQVIGRPYWQSPDLQVAASIYLLMAVLVLSIFTDAWGNLRRFQGVARSVVRGEAKVSF VEGNRVPELAEVAAELDSMVATLKRSEGLLRQAAEENAHALKAPLAVISQSLEPLGRAVAPDNVRAVRALDLIGQSVERL DGLVSTIRRTDETIAALIDRPRDRVDASALLNRLGRGYIRMAAERSVGLDMGVAAGLWISGSDEMLEVIAENLLDNAIDF SPPGGRISMDLRQENGMALLRVRDNGPGVPEGELERIFERHVSQRGKAEGGQVEHYGLGLWIVRRNAEAMGGKAWAAGAP GGGLEVSVALPLGD
Sequences:
>Translated_494_residues MPRLGLWRGSFAVKLASIALIFAVVPVLIYLQLETVETQRNALMLRLAQEQGKLAGEALFPLLEQFSPRNADRIDPVVRR LGEGGMSIKVLFRPAQSNGARNFLLVASAPETGPQQARPAMDRLVESGVLAHLAASCEGRAPLALRLAGIQEGGELLTYL APHATRLGCWVVLTAQPTGTLPEQVIGRPYWQSPDLQVAASIYLLMAVLVLSIFTDAWGNLRRFQGVARSVVRGEAKVSF VEGNRVPELAEVAAELDSMVATLKRSEGLLRQAAEENAHALKAPLAVISQSLEPLGRAVAPDNVRAVRALDLIGQSVERL DGLVSTIRRTDETIAALIDRPRDRVDASALLNRLGRGYIRMAAERSVGLDMGVAAGLWISGSDEMLEVIAENLLDNAIDF SPPGGRISMDLRQENGMALLRVRDNGPGVPEGELERIFERHVSQRGKAEGGQVEHYGLGLWIVRRNAEAMGGKAWAAGAP GGGLEVSVALPLGD >Mature_493_residues PRLGLWRGSFAVKLASIALIFAVVPVLIYLQLETVETQRNALMLRLAQEQGKLAGEALFPLLEQFSPRNADRIDPVVRRL GEGGMSIKVLFRPAQSNGARNFLLVASAPETGPQQARPAMDRLVESGVLAHLAASCEGRAPLALRLAGIQEGGELLTYLA PHATRLGCWVVLTAQPTGTLPEQVIGRPYWQSPDLQVAASIYLLMAVLVLSIFTDAWGNLRRFQGVARSVVRGEAKVSFV EGNRVPELAEVAAELDSMVATLKRSEGLLRQAAEENAHALKAPLAVISQSLEPLGRAVAPDNVRAVRALDLIGQSVERLD GLVSTIRRTDETIAALIDRPRDRVDASALLNRLGRGYIRMAAERSVGLDMGVAAGLWISGSDEMLEVIAENLLDNAIDFS PPGGRISMDLRQENGMALLRVRDNGPGVPEGELERIFERHVSQRGKAEGGQVEHYGLGLWIVRRNAEAMGGKAWAAGAPG GGLEVSVALPLGD
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=28.6852589641434, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1790861, Length=275, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=25.8620689655172, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790567, Length=176, Percent_Identity=27.2727272727273, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI145693157, Length=276, Percent_Identity=26.0869565217391, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53136; Mature: 53005
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGLWRGSFAVKLASIALIFAVVPVLIYLQLETVETQRNALMLRLAQEQGKLAGEALF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLLEQFSPRNADRIDPVVRRLGEGGMSIKVLFRPAQSNGARNFLLVASAPETGPQQARPA HHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHH MDRLVESGVLAHLAASCEGRAPLALRLAGIQEGGELLTYLAPHATRLGCWVVLTAQPTGT HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCC LPEQVIGRPYWQSPDLQVAASIYLLMAVLVLSIFTDAWGNLRRFQGVARSVVRGEAKVSF CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VEGNRVPELAEVAAELDSMVATLKRSEGLLRQAAEENAHALKAPLAVISQSLEPLGRAVA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDNVRAVRALDLIGQSVERLDGLVSTIRRTDETIAALIDRPRDRVDASALLNRLGRGYIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCEE MAAERSVGLDMGVAAGLWISGSDEMLEVIAENLLDNAIDFSPPGGRISMDLRQENGMALL EHHHHCCCCCCCHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEE RVRDNGPGVPEGELERIFERHVSQRGKAEGGQVEHYGLGLWIVRRNAEAMGGKAWAAGAP EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCHHCCCCEEECCCC GGGLEVSVALPLGD CCCEEEEEEECCCC >Mature Secondary Structure PRLGLWRGSFAVKLASIALIFAVVPVLIYLQLETVETQRNALMLRLAQEQGKLAGEALF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLLEQFSPRNADRIDPVVRRLGEGGMSIKVLFRPAQSNGARNFLLVASAPETGPQQARPA HHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHH MDRLVESGVLAHLAASCEGRAPLALRLAGIQEGGELLTYLAPHATRLGCWVVLTAQPTGT HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCC LPEQVIGRPYWQSPDLQVAASIYLLMAVLVLSIFTDAWGNLRRFQGVARSVVRGEAKVSF CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VEGNRVPELAEVAAELDSMVATLKRSEGLLRQAAEENAHALKAPLAVISQSLEPLGRAVA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDNVRAVRALDLIGQSVERLDGLVSTIRRTDETIAALIDRPRDRVDASALLNRLGRGYIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCEE MAAERSVGLDMGVAAGLWISGSDEMLEVIAENLLDNAIDFSPPGGRISMDLRQENGMALL EHHHHCCCCCCCHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEE RVRDNGPGVPEGELERIFERHVSQRGKAEGGQVEHYGLGLWIVRRNAEAMGGKAWAAGAP EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCHHCCCCEEECCCC GGGLEVSVALPLGD CCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]