| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is chvI [H]
Identifier: 83313400
GI number: 83313400
Start: 4706009
End: 4706737
Strand: Reverse
Name: chvI [H]
Synonym: amb4301
Alternate gene names: 83313400
Gene position: 4706737-4706009 (Counterclockwise)
Preceding gene: 83313401
Following gene: 83313399
Centisome position: 94.76
GC content: 67.63
Gene sequence:
>729_bases ATGGCAAGTGAGGCCAATTCCCCTTTGATCGCCATCGTCGACGACGATCCGCTGTTCCGGGAGACTCTGGCGGGCAATCT GGGCGATGCCGGCTATGGGGTGCGGGCCTGGGGCGATGGCGAGGCTTTTCTGGCGGACCTGGCGGCACAGACGGAGCCCG ACCTGCTGTTACTGGACTGGAAGATGCCGGGGATCAACGGGATCGAGGTGTTGCGTCGCCTGCGCTCCGCCCAGGTCGCC TTGCCGGTGATCTTCCTGACCGTGCTCAGCGACCAGATCTTCGAGGAGGCCGCTCTGTTGGGCGGCGCCGTGGATTTTAT CGAGAAGTCGCGCAGCTTCACCATCCTGGAACGGCGCATTGCGCTGACCCTGGGGCGCGCCGCCGCCGCCGAGCCCGCCG CCGCCACCCGTGTCGGCGGGCTCAGCCTGGACACCACCAGCCGCCGGGCCCAGTGGCGGGGCAGGCCGGTGGACCTGACG GTGGGCGAGTTCTCCATGGTCGAGGCCCTGGCCGCCAAGGCCGGACGCGACGTCAGCTACCGCGAGCTTTACGATTCCGG GCGCGGCAAGGGCTTTCACGGCGGCGCCGGCGAGGACGGCTACCGCACCAATGTGCGGGCCGCCATCAAGCGCATCCGCG AGAAGTTCAAGACCGTCGATCCGGACTTCGAGCAGATCGGCAATTATCCCGGCTTCGGCTATGTCTGGCAGGCTGAGCGC GATGCCTAG
Upstream 100 bases:
>100_bases GAGGTGGAGACCGATATCGAGCGTGTGCTTGGTTACGAATTCGAGGGAGGCAAGGATGCCGTCACCTGCTTCAAGCGTCT GCGCGATACGGGAGGCCGCA
Downstream 100 bases:
>100_bases ACTCGGACTCTGGCGGGGATCCTTCGCCGTCAAGCTGGCCAGCATCGCCCTGATCTTCGCCGTGGTGCCGGTGTTGATCT ACCTGCAGCTGGAGACGGTG
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MASEANSPLIAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDWKMPGINGIEVLRRLRSAQVA LPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRIALTLGRAAAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLT VGEFSMVEALAAKAGRDVSYRELYDSGRGKGFHGGAGEDGYRTNVRAAIKRIREKFKTVDPDFEQIGNYPGFGYVWQAER DA
Sequences:
>Translated_242_residues MASEANSPLIAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDWKMPGINGIEVLRRLRSAQVA LPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRIALTLGRAAAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLT VGEFSMVEALAAKAGRDVSYRELYDSGRGKGFHGGAGEDGYRTNVRAAIKRIREKFKTVDPDFEQIGNYPGFGYVWQAER DA >Mature_241_residues ASEANSPLIAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDWKMPGINGIEVLRRLRSAQVAL PVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRIALTLGRAAAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLTV GEFSMVEALAAKAGRDVSYRELYDSGRGKGFHGGAGEDGYRTNVRAAIKRIREKFKTVDPDFEQIGNYPGFGYVWQAERD A
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=30.0884955752212, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788394, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1789809, Length=233, Percent_Identity=27.4678111587983, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786784, Length=235, Percent_Identity=28.936170212766, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87082012, Length=232, Percent_Identity=29.3103448275862, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786599, Length=210, Percent_Identity=28.0952380952381, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI145693140, Length=175, Percent_Identity=29.1428571428571, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787229, Length=213, Percent_Identity=27.6995305164319, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786911, Length=180, Percent_Identity=31.1111111111111, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790299, Length=117, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26278; Mature: 26147
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEANSPLIAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDW CCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEE KMPGINGIEVLRRLRSAQVALPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALTLGRAAAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLTVGEFSMVEALAAKAGRDVSY HHHHCCHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHH RELYDSGRGKGFHGGAGEDGYRTNVRAAIKRIREKFKTVDPDFEQIGNYPGFGYVWQAER HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCC DA CC >Mature Secondary Structure ASEANSPLIAIVDDDPLFRETLAGNLGDAGYGVRAWGDGEAFLADLAAQTEPDLLLLDW CCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEE KMPGINGIEVLRRLRSAQVALPVIFLTVLSDQIFEEAALLGGAVDFIEKSRSFTILERRI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALTLGRAAAAEPAAATRVGGLSLDTTSRRAQWRGRPVDLTVGEFSMVEALAAKAGRDVSY HHHHCCHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHH RELYDSGRGKGFHGGAGEDGYRTNVRAAIKRIREKFKTVDPDFEQIGNYPGFGYVWQAER HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCC DA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]