| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cmk
Identifier: 83313361
GI number: 83313361
Start: 4672742
End: 4673377
Strand: Reverse
Name: cmk
Synonym: amb4262
Alternate gene names: 83313361
Gene position: 4673377-4672742 (Counterclockwise)
Preceding gene: 83313362
Following gene: 83313360
Centisome position: 94.09
GC content: 69.34
Gene sequence:
>636_bases GTGAGCACTATCATCGCCATCGACGGCCCCGCGGCGGCCGGCAAGGGGACTCTGGCGCGGCGTCTGGCCGCTGAATTGGG CTTCGACTATCTCGACACCGGCCTGATCTATCGCGCCGTGGGCATGAAGCTGGCCCGCGCCGGGCTCGACCCCGCCGACG TGGCCCTGGCCGAGCGGGCGGCCCGGCAGCTGTCGCCGGATGACCTGGCCGCCACCGATCTGCGCATCGACGAAGCCGCC CAGGCGGCGTCCAAGGTGGCTTCCATTCCCGGCGTGCGCGCCGCTTTGCTGGACTTCCAGCGCCGCTTCGCCGCCACTCC GCCGGGGGGCAAGGGGGCCGTGCTCGACGGCCGCGACATCGGGACCGTGGTCTGTCCCGAGGCGCAGGTAAAGTTGTTCG TCACGGCCAGCGTGGAAAAAAGGGCCGAGCGACGGCTGAAAGAGTTGCAGGAAAAGGGCCTGGGGGCTATATACGGCACC GTCCTGGCCGACATGCGGGAACGTGACGAGCGCGATACCAACCGCGCGGTCGCCCCGCTGGTTCCGGCCCAGGATGCCGC CGTGCTGGATACCTCCGACCTCGATGCCGATCAGGCTTTTGCCGCCGCGCTGGGGATCATCGGTTCCAAACGGTAG
Upstream 100 bases:
>100_bases GGCCCGTGGCCGTGGACGATTCCGAAGCCATCGACACCAGCTTCCCCGCCTTCGTCGAACTGATGAACGGGCTGGGGGCG AAGATTTCCGGAGACAATCC
Downstream 100 bases:
>100_bases CATTCAGAACCTGTTGACGCCGCCCGGGCAACCCTGGGCGGTGGTTTTCTTTTTTGAGAAACGTCCTTTTTTACGCAAAG ACCGCCGGATTCAACCGGCA
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSTIIAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMKLARAGLDPADVALAERAARQLSPDDLAATDLRIDEAA QAASKVASIPGVRAALLDFQRRFAATPPGGKGAVLDGRDIGTVVCPEAQVKLFVTASVEKRAERRLKELQEKGLGAIYGT VLADMRERDERDTNRAVAPLVPAQDAAVLDTSDLDADQAFAAALGIIGSKR
Sequences:
>Translated_211_residues MSTIIAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMKLARAGLDPADVALAERAARQLSPDDLAATDLRIDEAA QAASKVASIPGVRAALLDFQRRFAATPPGGKGAVLDGRDIGTVVCPEAQVKLFVTASVEKRAERRLKELQEKGLGAIYGT VLADMRERDERDTNRAVAPLVPAQDAAVLDTSDLDADQAFAAALGIIGSKR >Mature_210_residues STIIAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMKLARAGLDPADVALAERAARQLSPDDLAATDLRIDEAAQ AASKVASIPGVRAALLDFQRRFAATPPGGKGAVLDGRDIGTVVCPEAQVKLFVTASVEKRAERRLKELQEKGLGAIYGTV LADMRERDERDTNRAVAPLVPAQDAAVLDTSDLDADQAFAAALGIIGSKR
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=218, Percent_Identity=44.0366972477064, Blast_Score=157, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_MAGSA (Q2VZA9)
Other databases:
- EMBL: AP007255 - RefSeq: YP_423625.1 - HSSP: P0A6I0 - ProteinModelPortal: Q2VZA9 - SMR: Q2VZA9 - STRING: Q2VZA9 - GeneID: 3802777 - GenomeReviews: AP007255_GR - KEGG: mag:amb4262 - NMPDR: fig|342108.5.peg.3831 - eggNOG: COG0283 - HOGENOM: HBG354377 - OMA: DIGTVIC - PhylomeDB: Q2VZA9 - ProtClustDB: CLSK745275 - BioCyc: MMAG342108:AMB4262-MONOMER - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 22094; Mature: 21963
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIIAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMKLARAGLDPADVALAERA CCEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ARQLSPDDLAATDLRIDEAAQAASKVASIPGVRAALLDFQRRFAATPPGGKGAVLDGRDI HHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCC GTVVCPEAQVKLFVTASVEKRAERRLKELQEKGLGAIYGTVLADMRERDERDTNRAVAPL CEEECCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC VPAQDAAVLDTSDLDADQAFAAALGIIGSKR CCCCCCEEECCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STIIAIDGPAAAGKGTLARRLAAELGFDYLDTGLIYRAVGMKLARAGLDPADVALAERA CEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ARQLSPDDLAATDLRIDEAAQAASKVASIPGVRAALLDFQRRFAATPPGGKGAVLDGRDI HHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCC GTVVCPEAQVKLFVTASVEKRAERRLKELQEKGLGAIYGTVLADMRERDERDTNRAVAPL CEEECCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC VPAQDAAVLDTSDLDADQAFAAALGIIGSKR CCCCCCEEECCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA