| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yjeE [C]
Identifier: 83313348
GI number: 83313348
Start: 4658887
End: 4659357
Strand: Reverse
Name: yjeE [C]
Synonym: amb4249
Alternate gene names: 83313348
Gene position: 4659357-4658887 (Counterclockwise)
Preceding gene: 83313349
Following gene: 83313347
Centisome position: 93.8
GC content: 66.88
Gene sequence:
>471_bases ATGAGTCTGGTCATTTCCTTCGATCTGCCCGTCGAGGCCGACACCATCCGCCTGGGCCGCAAGCTGGCCGCCCTGGTCCG TCCCGGCGACGTCATCGCCCTGGAAGGCACGCTGGGCACCGGCAAGAGCACCCTGGCCCGCGCCCTGATCCAGGCGCTGA CCGACGATGAGGAAGAGGTGCCAAGCCCCACCTTCACCCTGGTGCAGCAATACGAGACCCCGGCCGGGCTGGTCTGGCAT TTCGACCTCTACCGTCTGGAAAAGCCCGACGACGCCCTGGAACTGGACATCGAGGAGGCCTTCGCCGAGGGCATCAGCCT GATCGAATGGCCCGACAAGTTGGGGCCCCATCTGCCGCGCCGCCGCCTCGAAGTACTGCTGCAACAGGGCGAGGCCGGGC TGGGCCGCCACGCCACCTTGACCGCTTATGGCCCCTGGGCCGACCGTATCGGAGAATTGGCGCATGAGTGA
Upstream 100 bases:
>100_bases TGCTGGGCCATTCCTCGCTGTCCACCACTCAGCGCTATACCGAGGTGGATGCGGCGCGTCTCACCCGCGTCTATCGTGAC GCCCATCCGAGGGCCAAGGC
Downstream 100 bases:
>100_bases GCGCGAAAATCTTATTCAAGACTTCCTGGCCAAGGCCGGCTGGGGCGCCGCCCGGCGCGGGCGGCTGGCCGGCGATGCCA GCTTCCGCCATTACGACCGG
Product: ATPase or kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSLVISFDLPVEADTIRLGRKLAALVRPGDVIALEGTLGTGKSTLARALIQALTDDEEEVPSPTFTLVQQYETPAGLVWH FDLYRLEKPDDALELDIEEAFAEGISLIEWPDKLGPHLPRRRLEVLLQQGEAGLGRHATLTAYGPWADRIGELAHE
Sequences:
>Translated_156_residues MSLVISFDLPVEADTIRLGRKLAALVRPGDVIALEGTLGTGKSTLARALIQALTDDEEEVPSPTFTLVQQYETPAGLVWH FDLYRLEKPDDALELDIEEAFAEGISLIEWPDKLGPHLPRRRLEVLLQQGEAGLGRHATLTAYGPWADRIGELAHE >Mature_155_residues SLVISFDLPVEADTIRLGRKLAALVRPGDVIALEGTLGTGKSTLARALIQALTDDEEEVPSPTFTLVQQYETPAGLVWHF DLYRLEKPDDALELDIEEAFAEGISLIEWPDKLGPHLPRRRLEVLLQQGEAGLGRHATLTAYGPWADRIGELAHE
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=135, Percent_Identity=38.5185185185185, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17206; Mature: 17075
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVISFDLPVEADTIRLGRKLAALVRPGDVIALEGTLGTGKSTLARALIQALTDDEEEV CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHC PSPTFTLVQQYETPAGLVWHFDLYRLEKPDDALELDIEEAFAEGISLIEWPDKLGPHLPR CCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECHHHHHHCCCEEEECCHHHCCCCCH RRLEVLLQQGEAGLGRHATLTAYGPWADRIGELAHE HHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCC >Mature Secondary Structure SLVISFDLPVEADTIRLGRKLAALVRPGDVIALEGTLGTGKSTLARALIQALTDDEEEV EEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHC PSPTFTLVQQYETPAGLVWHFDLYRLEKPDDALELDIEEAFAEGISLIEWPDKLGPHLPR CCCHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECHHHHHHCCCEEEECCHHHCCCCCH RRLEVLLQQGEAGLGRHATLTAYGPWADRIGELAHE HHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA