| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313288
Identifier: 83313288
GI number: 83313288
Start: 4604136
End: 4604870
Strand: Reverse
Name: 83313288
Synonym: amb4189
Alternate gene names: NA
Gene position: 4604870-4604136 (Counterclockwise)
Preceding gene: 83313290
Following gene: 83313286
Centisome position: 92.71
GC content: 73.2
Gene sequence:
>735_bases ATGGACGTTCAACGACTTGCCAAGGTGCTGGCGCTGGCCGCTTCGGACAACGATGCCGAGGCGCTGCACGCCTTGCGCAC CGCCGGGCGGCTGCTGGAAGGCGCCGGGCTGGACTTCGTCGCCCTGGCGTCGCGGGTCGCCGAAGGCGGGCCGGTGGTCA GCTCCACCCGGCTGGAGGACCTGGAAGACACGGTCTTCGACCTGCGCAACGAAATCCGTCACCTGCGCTCGGAAAACGAA AAGCTGCGCCAGACCGCTCCGGCCCCGGCGAACGGTCTGGCCACCGCCGCCCAGGATGTGGCCCAGGTCATCCGTCTGCA GGCCGAACGCGACGAGTTGCGCGAAACCCTGGGCGCCGAGACCCGCCGCGCCGACGCCGCCCAGGCGGCCGAGCAGGCCC GTCTGGCCGATCTGGCCCAGGCCATCGAGGCGGCCGAGCGTCTGGCCGCCCAGCTCGAGGCGCTGAAGGGCCGCACCGAC CGGCTGGAGGCCGAGAACCGCCGCCTGGGTCTGGTGGCCACCGCCCTCAAGGGCGAACTGGACGAGCGTCTGGCCGACCG CAATCATCCCCTGCCGCCGGTGGCGATGCCTCAGGCCGTCTCGCCGGTCGTGCAACCGGCCCCGGTGGTGCGGGCCGAAC CGGCTCCCCGCCGCCCCGCCGTTCCGCCGCCAGCCGCCGTCGCCGCCCGGCGGCCCAAGGCGGGCCAGCCGGTCAACCAG TACGCTCTGTTCTAA
Upstream 100 bases:
>100_bases TCTGGCCGTGGTGGGGCGGTCTCGGACCGAACCACAAAATATGGTTTGCCCCCGGACTCGGCTTTTGACAGAATCCGGCG TTCTCGGGGAATAGGGGCTC
Downstream 100 bases:
>100_bases TCGGCTGCGGAGAATGCCCCTTCGGGGGCTTTTGCCCCCGATCCCCCAACCGGGAAGCATAGCTTCCCGAACCCTTCAGC TTTTCAATTCATTGAAAAAA
Product: membrane protein related to metalloendopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MDVQRLAKVLALAASDNDAEALHALRTAGRLLEGAGLDFVALASRVAEGGPVVSSTRLEDLEDTVFDLRNEIRHLRSENE KLRQTAPAPANGLATAAQDVAQVIRLQAERDELRETLGAETRRADAAQAAEQARLADLAQAIEAAERLAAQLEALKGRTD RLEAENRRLGLVATALKGELDERLADRNHPLPPVAMPQAVSPVVQPAPVVRAEPAPRRPAVPPPAAVAARRPKAGQPVNQ YALF
Sequences:
>Translated_244_residues MDVQRLAKVLALAASDNDAEALHALRTAGRLLEGAGLDFVALASRVAEGGPVVSSTRLEDLEDTVFDLRNEIRHLRSENE KLRQTAPAPANGLATAAQDVAQVIRLQAERDELRETLGAETRRADAAQAAEQARLADLAQAIEAAERLAAQLEALKGRTD RLEAENRRLGLVATALKGELDERLADRNHPLPPVAMPQAVSPVVQPAPVVRAEPAPRRPAVPPPAAVAARRPKAGQPVNQ YALF >Mature_244_residues MDVQRLAKVLALAASDNDAEALHALRTAGRLLEGAGLDFVALASRVAEGGPVVSSTRLEDLEDTVFDLRNEIRHLRSENE KLRQTAPAPANGLATAAQDVAQVIRLQAERDELRETLGAETRRADAAQAAEQARLADLAQAIEAAERLAAQLEALKGRTD RLEAENRRLGLVATALKGELDERLADRNHPLPPVAMPQAVSPVVQPAPVVRAEPAPRRPAVPPPAAVAARRPKAGQPVNQ YALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26106; Mature: 26106
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQRLAKVLALAASDNDAEALHALRTAGRLLEGAGLDFVALASRVAEGGPVVSSTRLED CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH LEDTVFDLRNEIRHLRSENEKLRQTAPAPANGLATAAQDVAQVIRLQAERDELRETLGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRRADAAQAAEQARLADLAQAIEAAERLAAQLEALKGRTDRLEAENRRLGLVATALKGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH DERLADRNHPLPPVAMPQAVSPVVQPAPVVRAEPAPRRPAVPPPAAVAARRPKAGQPVNQ HHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH YALF HCCC >Mature Secondary Structure MDVQRLAKVLALAASDNDAEALHALRTAGRLLEGAGLDFVALASRVAEGGPVVSSTRLED CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH LEDTVFDLRNEIRHLRSENEKLRQTAPAPANGLATAAQDVAQVIRLQAERDELRETLGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRRADAAQAAEQARLADLAQAIEAAERLAAQLEALKGRTDRLEAENRRLGLVATALKGEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH DERLADRNHPLPPVAMPQAVSPVVQPAPVVRAEPAPRRPAVPPPAAVAARRPKAGQPVNQ HHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH YALF HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA