| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313254
Identifier: 83313254
GI number: 83313254
Start: 4565452
End: 4566732
Strand: Reverse
Name: 83313254
Synonym: amb4155
Alternate gene names: NA
Gene position: 4566732-4565452 (Counterclockwise)
Preceding gene: 83313257
Following gene: 83313250
Centisome position: 91.94
GC content: 68.7
Gene sequence:
>1281_bases ATGGCCGAAGGCTTGCCAATCCGGCTCAATGAACACGCCCAGCGGCGAAGCCTGGCCGGCGAGGTCCACGCCCGGCCCTA CGAGCTGTTGTCCGCCCCGGTGCGGGCCTCGCAACTGGCCATGGTGGGGGCCAATCCCGCCGACGAGCGCGAGCATCTCA CCCAATTGCTGGCCTCCCACGGGGCCGAGCCGCCCGGCGACGGCGCCGGATACTTCATCCGCGACCTGGGCGGCTTTCGC CTGCGCTGGGAGCGGCATTCCGAATTCTCCACCTATACGGTGATGCGCTTCGATCCGTTCGACGACGGATTCGCCCATAC GGCGCTGGACATGCTGCCGGCGTCCTGGCTGGAGACCATGCCGGGCGAGGCCATGACCGCCGTCCACGTGCTGGTGACCA AGGAATTGCCCGACGATCTGGGGCCGCTGTTCGACGGCAACACCCTGGTGGGCGCCAAGGTGCTGTGGGGGGCGGGCGAG GCCTGGACCGATTTCCGCCTGCACGCCGACGGCTTTTCCCGCGTCGTGCTCAAGGATTGCGGCCTGACGCGGGGCCAGAC CGGACGCCTCGTCCAGCGGCTGCTGGAGATCGAGACCTATCGCATGATGGCGCTGCTGGCCTTTCCCCTGGCGCGCCAGT CGGCGCCCGAGGTGGCCCGCATCGACCGCGAGCTGGCCGGCATCGTCAGCCAGCTGGCCGACCCGGCGGTGCAGCAGAAC GACCGCGACCTGCTGGAGCATCTCACCCGGCTGGCCGCCGAGGCCGAGCGCCTGGATGCCGCCACCAGCTTCCGCATGTC GGCGGCCAAGGCCTATTACGCCATCGTCTGCCGCCGCATCGAGGAATTGCGCGAAGACCGCATTCCCGGCCTGCAGACCT TCGCCGAATTCGTCGACCGGCGCCTGGGTCCCGCCATGAAGACCTGCGAATCAGTCTCCGAGCGCCAGCAATTGCTGGCC ACCCGGGTGTCGCGGGCCGGTGATCTGCTGCGCACCCGGGTGGACATCGCCCTGGAAGAGAAGAACCGCGACCTGCTGAA CTCCATGAACCGCCGCGCCGAGCTGCAATTGCGGTTGCAGGAGACGGTGGAGGGCCTGTCCGTGGTGGCCATCAGCTATT ACCTGCTGGGCCTGATCGGCTATCTGGCCAAGGGGCTGAAATCCGTCGGCCTGCCGGTGGATTACGACCTGGCCGGGCTG ATCGGCCTGCCGGTGGTGGCCGCCGCCGTCTGGCTGGGGGTGCGGCGCCTCAGAAAGGCGCTGAGCCACAAGGGGGAGTG A
Upstream 100 bases:
>100_bases CCTGGGCCACGGCGAGGTTGGACATAAAGGCTCCTGACGGAAAGGGGCTGAGTGGTGTAAACCTGACGAAGCAGCATCTC TTATCGGAGACATATGGGCA
Downstream 100 bases:
>100_bases GGCGGCCCTTCCCCGGGGCTCCCGCCCCGGTCCCCGGTTGGAGGCGATGCCTCCAAGCCTCCCTTTGATTTATCCAAGAA AAAAGGGCTATGCGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MAEGLPIRLNEHAQRRSLAGEVHARPYELLSAPVRASQLAMVGANPADEREHLTQLLASHGAEPPGDGAGYFIRDLGGFR LRWERHSEFSTYTVMRFDPFDDGFAHTALDMLPASWLETMPGEAMTAVHVLVTKELPDDLGPLFDGNTLVGAKVLWGAGE AWTDFRLHADGFSRVVLKDCGLTRGQTGRLVQRLLEIETYRMMALLAFPLARQSAPEVARIDRELAGIVSQLADPAVQQN DRDLLEHLTRLAAEAERLDAATSFRMSAAKAYYAIVCRRIEELREDRIPGLQTFAEFVDRRLGPAMKTCESVSERQQLLA TRVSRAGDLLRTRVDIALEEKNRDLLNSMNRRAELQLRLQETVEGLSVVAISYYLLGLIGYLAKGLKSVGLPVDYDLAGL IGLPVVAAAVWLGVRRLRKALSHKGE
Sequences:
>Translated_426_residues MAEGLPIRLNEHAQRRSLAGEVHARPYELLSAPVRASQLAMVGANPADEREHLTQLLASHGAEPPGDGAGYFIRDLGGFR LRWERHSEFSTYTVMRFDPFDDGFAHTALDMLPASWLETMPGEAMTAVHVLVTKELPDDLGPLFDGNTLVGAKVLWGAGE AWTDFRLHADGFSRVVLKDCGLTRGQTGRLVQRLLEIETYRMMALLAFPLARQSAPEVARIDRELAGIVSQLADPAVQQN DRDLLEHLTRLAAEAERLDAATSFRMSAAKAYYAIVCRRIEELREDRIPGLQTFAEFVDRRLGPAMKTCESVSERQQLLA TRVSRAGDLLRTRVDIALEEKNRDLLNSMNRRAELQLRLQETVEGLSVVAISYYLLGLIGYLAKGLKSVGLPVDYDLAGL IGLPVVAAAVWLGVRRLRKALSHKGE >Mature_425_residues AEGLPIRLNEHAQRRSLAGEVHARPYELLSAPVRASQLAMVGANPADEREHLTQLLASHGAEPPGDGAGYFIRDLGGFRL RWERHSEFSTYTVMRFDPFDDGFAHTALDMLPASWLETMPGEAMTAVHVLVTKELPDDLGPLFDGNTLVGAKVLWGAGEA WTDFRLHADGFSRVVLKDCGLTRGQTGRLVQRLLEIETYRMMALLAFPLARQSAPEVARIDRELAGIVSQLADPAVQQND RDLLEHLTRLAAEAERLDAATSFRMSAAKAYYAIVCRRIEELREDRIPGLQTFAEFVDRRLGPAMKTCESVSERQQLLAT RVSRAGDLLRTRVDIALEEKNRDLLNSMNRRAELQLRLQETVEGLSVVAISYYLLGLIGYLAKGLKSVGLPVDYDLAGLI GLPVVAAAVWLGVRRLRKALSHKGE
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47229; Mature: 47098
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGLPIRLNEHAQRRSLAGEVHARPYELLSAPVRASQLAMVGANPADEREHLTQLLASH CCCCCCCEECHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEEECCCCCHHHHHHHHHHHHC GAEPPGDGAGYFIRDLGGFRLRWERHSEFSTYTVMRFDPFDDGFAHTALDMLPASWLETM CCCCCCCCCCHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC PGEAMTAVHVLVTKELPDDLGPLFDGNTLVGAKVLWGAGEAWTDFRLHADGFSRVVLKDC CCCHHHHHHHHHHHHCCHHHCCCCCCCCEECHHHEECCCCCCCCCEEECCCHHHHHHHHC GLTRGQTGRLVQRLLEIETYRMMALLAFPLARQSAPEVARIDRELAGIVSQLADPAVQQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCC DRDLLEHLTRLAAEAERLDAATSFRMSAAKAYYAIVCRRIEELREDRIPGLQTFAEFVDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RLGPAMKTCESVSERQQLLATRVSRAGDLLRTRVDIALEEKNRDLLNSMNRRAELQLRLQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHH ETVEGLSVVAISYYLLGLIGYLAKGLKSVGLPVDYDLAGLIGLPVVAAAVWLGVRRLRKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSHKGE HHCCCC >Mature Secondary Structure AEGLPIRLNEHAQRRSLAGEVHARPYELLSAPVRASQLAMVGANPADEREHLTQLLASH CCCCCCEECHHHHHHHHHHHHCCCCHHHHHCCCCHHHEEEECCCCCHHHHHHHHHHHHC GAEPPGDGAGYFIRDLGGFRLRWERHSEFSTYTVMRFDPFDDGFAHTALDMLPASWLETM CCCCCCCCCCHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC PGEAMTAVHVLVTKELPDDLGPLFDGNTLVGAKVLWGAGEAWTDFRLHADGFSRVVLKDC CCCHHHHHHHHHHHHCCHHHCCCCCCCCEECHHHEECCCCCCCCCEEECCCHHHHHHHHC GLTRGQTGRLVQRLLEIETYRMMALLAFPLARQSAPEVARIDRELAGIVSQLADPAVQQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCC DRDLLEHLTRLAAEAERLDAATSFRMSAAKAYYAIVCRRIEELREDRIPGLQTFAEFVDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RLGPAMKTCESVSERQQLLATRVSRAGDLLRTRVDIALEEKNRDLLNSMNRRAELQLRLQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHH ETVEGLSVVAISYYLLGLIGYLAKGLKSVGLPVDYDLAGLIGLPVVAAAVWLGVRRLRKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSHKGE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA