| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cyaB [H]
Identifier: 83313159
GI number: 83313159
Start: 4460208
End: 4461500
Strand: Reverse
Name: cyaB [H]
Synonym: amb4060
Alternate gene names: 83313159
Gene position: 4461500-4460208 (Counterclockwise)
Preceding gene: 83313169
Following gene: 83313158
Centisome position: 89.82
GC content: 67.52
Gene sequence:
>1293_bases ATGATCACCGGAATCATCGACCAGCCGTTTCCCATTCGTCGCCTGTATCTCACCCGGATGATTCCGGCCCTGGCGGTCTC CGCCCTGATCCTGCTGGGCGGCGGCTGGCTGTCGGTCACCTCCCTGGAACGCCGCGTCTACCTGGAAACCACCCAGCGCC GGGTGGAAAACACCGTGCATCTGGTGGAGAAGGCCGAGGCCGAGACCTGGGCGCGGCTGGTGGGAGGTGACAATCCGGCG GCGGTGCTCTCCGATCCGGCCGGCGCCCGCGCCCGCTTTCTGCTGGAGGCGGTGGCCAATGACGGCCACGTCTTCACCTT GAAGATCTTCAACGAGCGCGGCATCACGCTTTATGCCACCGACAGCGCCGACGTGGGCGTGCGCGAGGAGAATGCGGTGC TGCGCAGCGTGCTGCGCGACAGGCGGCCCGAGATCGAGACCACCACTCGCGGCGACCTCTCCCTCTACGAGATCTATGTT CCCGTCGAAAGCGGCGGCCACGTCATCGCATTCGAGGTCTACGAGCCGTCCAGCGTTCTCGACGACATCATCTTCGACAG CTTCGCCCGCTTCGCCGTGCTGCCCGCCGTCATCATGCTGGCCTTCGGCGTCTGGCTGTACCGGGTGGTGAGCAAGGCCC AGGCCGATATCGACGGCCGGGTCACCGTGCAGCAGAATCTCCGCCGCCAGTTGGAGCGCTTCGTGTCGCAAAGCGCCGGC GCGGCGGCGCGGCTGTCCCCCGACGGCGTGGTGCCGACCACGCGGGCCGGCATGACTCTGTTCTATTCCGACGTCCGCGA TTTCTCCAGCCTGGCCGAGTTCCATCCGCCCAAGGCCACGGTGGATTTCCTCAACGAACTGATGACCCGCCAGGTGGAAA TCGTCACCGCCCATGGCGGCGACGTGGACAAGATGATCGGCGACGCCCTGCTGGTCCGCTTCGAAGGCAGCGACCGCGAG GCCCGCGCCCTGGCCGCCGCCCAGGCCCTGCTGGCCGATCTGGCGGCGCGCCCAATGGCGCGGTCCATCGGCATCGGCCT GTATGACGGCGAGGCCATCCTCGGCGCCATCGGCCCCAAGGAGCGCCAGGACTTCACGGTGATCGGCGACAGCGTCAATC TCGCGGCCCGGCTGTGCTCCCTGGCCGAGGCCGGTCAACTGGTCATCGACGAACTGGCGCTGCGCCGTTCGGGCCTGCCG GAAACCGGCTTTTCCGCCGCCGAGGAAAACAAGGTCAAGGGGCGCAGCGGACTGGTCAGCGTGCGCCGCTGGTCACCATC GACGGTTGCCTAA
Upstream 100 bases:
>100_bases CGTGCGGCAGACGGATGGCGCACCGTTCAGGCCCCGTTCATCCGGGGCTGGCTAGGGTAGCCCCTGGGTTCATTCCTCAA GCTGCCATCGGGGGGCAAGC
Downstream 100 bases:
>100_bases CTATAACAATGGGATAGCGTGGGATCTTCATGAAACATTCAGACTCCTTCGGCCATAGTGCAGCGTCGGGTTCGAATGAT TTGAGTGAAGGGGGTATCCG
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MITGIIDQPFPIRRLYLTRMIPALAVSALILLGGGWLSVTSLERRVYLETTQRRVENTVHLVEKAEAETWARLVGGDNPA AVLSDPAGARARFLLEAVANDGHVFTLKIFNERGITLYATDSADVGVREENAVLRSVLRDRRPEIETTTRGDLSLYEIYV PVESGGHVIAFEVYEPSSVLDDIIFDSFARFAVLPAVIMLAFGVWLYRVVSKAQADIDGRVTVQQNLRRQLERFVSQSAG AAARLSPDGVVPTTRAGMTLFYSDVRDFSSLAEFHPPKATVDFLNELMTRQVEIVTAHGGDVDKMIGDALLVRFEGSDRE ARALAAAQALLADLAARPMARSIGIGLYDGEAILGAIGPKERQDFTVIGDSVNLAARLCSLAEAGQLVIDELALRRSGLP ETGFSAAEENKVKGRSGLVSVRRWSPSTVA
Sequences:
>Translated_430_residues MITGIIDQPFPIRRLYLTRMIPALAVSALILLGGGWLSVTSLERRVYLETTQRRVENTVHLVEKAEAETWARLVGGDNPA AVLSDPAGARARFLLEAVANDGHVFTLKIFNERGITLYATDSADVGVREENAVLRSVLRDRRPEIETTTRGDLSLYEIYV PVESGGHVIAFEVYEPSSVLDDIIFDSFARFAVLPAVIMLAFGVWLYRVVSKAQADIDGRVTVQQNLRRQLERFVSQSAG AAARLSPDGVVPTTRAGMTLFYSDVRDFSSLAEFHPPKATVDFLNELMTRQVEIVTAHGGDVDKMIGDALLVRFEGSDRE ARALAAAQALLADLAARPMARSIGIGLYDGEAILGAIGPKERQDFTVIGDSVNLAARLCSLAEAGQLVIDELALRRSGLP ETGFSAAEENKVKGRSGLVSVRRWSPSTVA >Mature_430_residues MITGIIDQPFPIRRLYLTRMIPALAVSALILLGGGWLSVTSLERRVYLETTQRRVENTVHLVEKAEAETWARLVGGDNPA AVLSDPAGARARFLLEAVANDGHVFTLKIFNERGITLYATDSADVGVREENAVLRSVLRDRRPEIETTTRGDLSLYEIYV PVESGGHVIAFEVYEPSSVLDDIIFDSFARFAVLPAVIMLAFGVWLYRVVSKAQADIDGRVTVQQNLRRQLERFVSQSAG AAARLSPDGVVPTTRAGMTLFYSDVRDFSSLAEFHPPKATVDFLNELMTRQVEIVTAHGGDVDKMIGDALLVRFEGSDRE ARALAAAQALLADLAARPMARSIGIGLYDGEAILGAIGPKERQDFTVIGDSVNLAARLCSLAEAGQLVIDELALRRSGLP ETGFSAAEENKVKGRSGLVSVRRWSPSTVA
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 46809; Mature: 46809
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGIIDQPFPIRRLYLTRMIPALAVSALILLGGGWLSVTSLERRVYLETTQRRVENTVH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH LVEKAEAETWARLVGGDNPAAVLSDPAGARARFLLEAVANDGHVFTLKIFNERGITLYAT HHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE DSADVGVREENAVLRSVLRDRRPEIETTTRGDLSLYEIYVPVESGGHVIAFEVYEPSSVL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCHHHH DDIIFDSFARFAVLPAVIMLAFGVWLYRVVSKAQADIDGRVTVQQNLRRQLERFVSQSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC AAARLSPDGVVPTTRAGMTLFYSDVRDFSSLAEFHPPKATVDFLNELMTRQVEIVTAHGG CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEEECCC DVDKMIGDALLVRFEGSDREARALAAAQALLADLAARPMARSIGIGLYDGEAILGAIGPK CHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCEECCCCC ERQDFTVIGDSVNLAARLCSLAEAGQLVIDELALRRSGLPETGFSAAEENKVKGRSGLVS CCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEE VRRWSPSTVA EEECCCCCCC >Mature Secondary Structure MITGIIDQPFPIRRLYLTRMIPALAVSALILLGGGWLSVTSLERRVYLETTQRRVENTVH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH LVEKAEAETWARLVGGDNPAAVLSDPAGARARFLLEAVANDGHVFTLKIFNERGITLYAT HHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE DSADVGVREENAVLRSVLRDRRPEIETTTRGDLSLYEIYVPVESGGHVIAFEVYEPSSVL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCHHHH DDIIFDSFARFAVLPAVIMLAFGVWLYRVVSKAQADIDGRVTVQQNLRRQLERFVSQSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC AAARLSPDGVVPTTRAGMTLFYSDVRDFSSLAEFHPPKATVDFLNELMTRQVEIVTAHGG CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEEECCC DVDKMIGDALLVRFEGSDREARALAAAQALLADLAARPMARSIGIGLYDGEAILGAIGPK CHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCEECCCCC ERQDFTVIGDSVNLAARLCSLAEAGQLVIDELALRRSGLPETGFSAAEENKVKGRSGLVS CCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEE VRRWSPSTVA EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]