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The map label for this gene is panD

Identifier: 83313121

GI number: 83313121

Start: 4431021

End: 4431563

Strand: Reverse

Name: panD

Synonym: amb4022

Alternate gene names: 83313121

Gene position: 4431563-4431021 (Counterclockwise)

Preceding gene: 83313123

Following gene: 83313120

Centisome position: 89.22

GC content: 60.59

Gene sequence:

>543_bases
ATGATGAAGATCATTCGCGCGAAGCTGCATGGCATTCGCGTTACCAATGCCGACCTCAATTATCACGGCTCGATCACCCT
CGATCCCGAGCAGTGCGAGATGGCCGGCATCTATCCCATGGAATTCGTCGACATCTGGAACAAGAACTCGGCGGCCCGCA
TTTCGACCTATGTCATCTTCGGCGAGCCGGGCTCGCGCTGCTGCGTCCTGAACGGCGCCGCCGCCCGCACCTGCCAGAAG
GGCGACGAGCTGATCATTGCCGCCTCGGCCGACATTTCCGGGCCGGAGAAGCTGTACGACATCAAGCCACGCATCCTGAC
CTTCCTGCCCGACAATCACGTGGATCAGGTGCTGTACTACGACGTGTTCCAGAGCGAGAAGCGGCCCTACGACTTCCGCA
TCGTCGACGCCGACAAGCACACCATCGAGAGCTGCCACACCTGGCCCAACGTGGATATCACCAAGCTGCGGTCCGATCTG
GCCGCCAAGGGCTGGTCCGAGGCCGAGATCGATTCCTTCATCGCGTCGCATTTCTCGCTGTAG

Upstream 100 bases:

>100_bases
CCCTCGCGGTCCACACCCCTTGACGCGAATAAGGTGTTGCGGAACAGGCCCCAGTGCGTTTACGTCACTGCCCAATGCTG
CAAGTTTGTTCCGGTGTCCC

Downstream 100 bases:

>100_bases
TCATGAAGCCCGCCATCGTCCTGCTCAGCGGCGGCCTTGATTCCGCCACGGTGCTGGCCATCGCCAAGGCCGAGGGCTTT
GCCCCGGCGGCGCTGACCTT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MMKIIRAKLHGIRVTNADLNYHGSITLDPEQCEMAGIYPMEFVDIWNKNSAARISTYVIFGEPGSRCCVLNGAAARTCQK
GDELIIAASADISGPEKLYDIKPRILTFLPDNHVDQVLYYDVFQSEKRPYDFRIVDADKHTIESCHTWPNVDITKLRSDL
AAKGWSEAEIDSFIASHFSL

Sequences:

>Translated_180_residues
MMKIIRAKLHGIRVTNADLNYHGSITLDPEQCEMAGIYPMEFVDIWNKNSAARISTYVIFGEPGSRCCVLNGAAARTCQK
GDELIIAASADISGPEKLYDIKPRILTFLPDNHVDQVLYYDVFQSEKRPYDFRIVDADKHTIESCHTWPNVDITKLRSDL
AAKGWSEAEIDSFIASHFSL
>Mature_180_residues
MMKIIRAKLHGIRVTNADLNYHGSITLDPEQCEMAGIYPMEFVDIWNKNSAARISTYVIFGEPGSRCCVLNGAAARTCQK
GDELIIAASADISGPEKLYDIKPRILTFLPDNHVDQVLYYDVFQSEKRPYDFRIVDADKHTIESCHTWPNVDITKLRSDL
AAKGWSEAEIDSFIASHFSL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=38.9380530973451, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_MAGSA (Q2VZZ9)

Other databases:

- EMBL:   AP007255
- RefSeq:   YP_423385.1
- ProteinModelPortal:   Q2VZZ9
- SMR:   Q2VZZ9
- STRING:   Q2VZZ9
- GeneID:   3806562
- GenomeReviews:   AP007255_GR
- KEGG:   mag:amb4022
- NMPDR:   fig|342108.5.peg.3615
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   DLNYHGS
- PhylomeDB:   Q2VZZ9
- ProtClustDB:   PRK05449
- BioCyc:   MMAG342108:AMB4022-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- ProDom:   PD009294

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 20284; Mature: 20284

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: ACT_SITE 24-24 ACT_SITE 57-57 BINDING 56-56

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIIRAKLHGIRVTNADLNYHGSITLDPEQCEMAGIYPMEFVDIWNKNSAARISTYVIF
CCCEEEEHHCEEEEECCCCCCCCEEEECHHHCCCCCCCCCCEEEECCCCCCEEEEEEEEE
GEPGSRCCVLNGAAARTCQKGDELIIAASADISGPEKLYDIKPRILTFLPDNHVDQVLYY
CCCCCEEEEEECHHHHHHCCCCCEEEEEECCCCCCHHEEECCCEEEEECCCCCHHHHHHH
DVFQSEKRPYDFRIVDADKHTIESCHTWPNVDITKLRSDLAAKGWSEAEIDSFIASHFSL
HHHHCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKIIRAKLHGIRVTNADLNYHGSITLDPEQCEMAGIYPMEFVDIWNKNSAARISTYVIF
CCCEEEEHHCEEEEECCCCCCCCEEEECHHHCCCCCCCCCCEEEECCCCCCEEEEEEEEE
GEPGSRCCVLNGAAARTCQKGDELIIAASADISGPEKLYDIKPRILTFLPDNHVDQVLYY
CCCCCEEEEEECHHHHHHCCCCCEEEEEECCCCCCHHEEECCCEEEEECCCCCHHHHHHH
DVFQSEKRPYDFRIVDADKHTIESCHTWPNVDITKLRSDLAAKGWSEAEIDSFIASHFSL
HHHHCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA