| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313040
Identifier: 83313040
GI number: 83313040
Start: 4351335
End: 4352219
Strand: Reverse
Name: 83313040
Synonym: amb3941
Alternate gene names: NA
Gene position: 4352219-4351335 (Counterclockwise)
Preceding gene: 83313047
Following gene: 83313039
Centisome position: 87.62
GC content: 67.91
Gene sequence:
>885_bases TTGGCCGCCCTTCCCGCCGGAGCCCGACCCATGGCCTTCCTGGACCATATCCGAACCTGCAACCGCCATGACCTGTCCAA GTTCCGGCCGTTCTCGGTGGAGGGGAAATGGATCGGCTGGGTGCGCCACGACGTGGCCCAGCGTCTGGCGGCGTTTCCCG AGGCGTTCCGCGTCTCGGTCGAAGGGGTCAGCCTCCATCCCGCCCTGTCCACCCCCGAGGCGCGCAGCGCCGCCATCGAC GAGGTGACGCGGGAACTGGCCGAGGATTGGGGCACGCCCAAGGCGCGGGGCGAGCGCTATCGGGTGGCGGCCCGCTTCGG CGATCCGGCCCTGATGAGCATCGACCGCGGCGTGGTCAGCCTGTTCGGCATCCGCGCCTATGGCGTCCACGTCAACGGTC TGGTACGCCGCCCTGACGGCCTTCACCTGTGGATCGGGCGCCGCGCCAAGGACAAGAGCGTGGCGCCCGGTAAGCTGGAC AACATGGTGGCGGGCGGTCAGCCCAGCGACCTGTCCCTGGCCGAGAACCTGATCAAGGAAGCGGCCGAGGAGGCCGACAT TCCGCGTGAACTGGCGGCCACCGCCCGGCCGGCGGGGGTGGTGTCCTACTGTCTGGAGGACGATTGGGGGCTCAAGCCGG ACGTGATGTTCTGCTATGACCTGGAGGTGCCCGAGACCTTCACGCCGCGCAACACCGACGGCGAGCTTCAGGGCTTCACC CTGATGCCGGTGGCCGAGGTGGCGCGGCTGGTCAGGGATACCGACGAGTTCAAGTTCAACGTCAACCTGGTGATCCTCGA CTTTCTGATCCGGCACGGCCTGATCTCGCCCGATGTCGAGCACGATTACGTGGACCTGGTGGGCGGCCTTCGGAAGGGCT GGTGA
Upstream 100 bases:
>100_bases TTCCCGTGGCGAGAACAGGGGGTGGCAGCATCGTATGAATATTTCTTAAACGAATTTTGCCGTGTGGCAGCCTTGACGGC AGCTCCGACGGGCGTCACCC
Downstream 100 bases:
>100_bases GGCCCGTCTGTCATTCCGAGCAAAGCGAGGAATCTCCGCCCGGATACTGGGGGCCGATTCTGACGGATCGCGCCAGGATG AGATCCTTCCTCCCCTCTGG
Product: NTP pyrophosphohydrolase including oxidative damage repair enzyme
Products: AMP; thiamine diphosphate
Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Hydrolase NUDIX Family
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAALPAGARPMAFLDHIRTCNRHDLSKFRPFSVEGKWIGWVRHDVAQRLAAFPEAFRVSVEGVSLHPALSTPEARSAAID EVTRELAEDWGTPKARGERYRVAARFGDPALMSIDRGVVSLFGIRAYGVHVNGLVRRPDGLHLWIGRRAKDKSVAPGKLD NMVAGGQPSDLSLAENLIKEAAEEADIPRELAATARPAGVVSYCLEDDWGLKPDVMFCYDLEVPETFTPRNTDGELQGFT LMPVAEVARLVRDTDEFKFNVNLVILDFLIRHGLISPDVEHDYVDLVGGLRKGW
Sequences:
>Translated_294_residues MAALPAGARPMAFLDHIRTCNRHDLSKFRPFSVEGKWIGWVRHDVAQRLAAFPEAFRVSVEGVSLHPALSTPEARSAAID EVTRELAEDWGTPKARGERYRVAARFGDPALMSIDRGVVSLFGIRAYGVHVNGLVRRPDGLHLWIGRRAKDKSVAPGKLD NMVAGGQPSDLSLAENLIKEAAEEADIPRELAATARPAGVVSYCLEDDWGLKPDVMFCYDLEVPETFTPRNTDGELQGFT LMPVAEVARLVRDTDEFKFNVNLVILDFLIRHGLISPDVEHDYVDLVGGLRKGW >Mature_293_residues AALPAGARPMAFLDHIRTCNRHDLSKFRPFSVEGKWIGWVRHDVAQRLAAFPEAFRVSVEGVSLHPALSTPEARSAAIDE VTRELAEDWGTPKARGERYRVAARFGDPALMSIDRGVVSLFGIRAYGVHVNGLVRRPDGLHLWIGRRAKDKSVAPGKLDN MVAGGQPSDLSLAENLIKEAAEEADIPRELAATARPAGVVSYCLEDDWGLKPDVMFCYDLEVPETFTPRNTDGELQGFTL MPVAEVARLVRDTDEFKFNVNLVILDFLIRHGLISPDVEHDYVDLVGGLRKGW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322602, Length=259, Percent_Identity=31.2741312741313, Blast_Score=123, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.6.2
Molecular weight: Translated: 32551; Mature: 32420
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPAGARPMAFLDHIRTCNRHDLSKFRPFSVEGKWIGWVRHDVAQRLAAFPEAFRVSV CCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHEEEE EGVSLHPALSTPEARSAAIDEVTRELAEDWGTPKARGERYRVAARFGDPALMSIDRGVVS CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH LFGIRAYGVHVNGLVRRPDGLHLWIGRRAKDKSVAPGKLDNMVAGGQPSDLSLAENLIKE HHHHHEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH AAEEADIPRELAATARPAGVVSYCLEDDWGLKPDVMFCYDLEVPETFTPRNTDGELQGFT HHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE LMPVAEVARLVRDTDEFKFNVNLVILDFLIRHGLISPDVEHDYVDLVGGLRKGW ECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AALPAGARPMAFLDHIRTCNRHDLSKFRPFSVEGKWIGWVRHDVAQRLAAFPEAFRVSV CCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHEEEE EGVSLHPALSTPEARSAAIDEVTRELAEDWGTPKARGERYRVAARFGDPALMSIDRGVVS CCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH LFGIRAYGVHVNGLVRRPDGLHLWIGRRAKDKSVAPGKLDNMVAGGQPSDLSLAENLIKE HHHHHEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH AAEEADIPRELAATARPAGVVSYCLEDDWGLKPDVMFCYDLEVPETFTPRNTDGELQGFT HHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE LMPVAEVARLVRDTDEFKFNVNLVILDFLIRHGLISPDVEHDYVDLVGGLRKGW ECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; thiamine
Specific reaction: ATP + thiamine = AMP + thiamine diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA