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The map label for this gene is yfjD [H]

Identifier: 83313023

GI number: 83313023

Start: 4335744

End: 4337036

Strand: Reverse

Name: yfjD [H]

Synonym: amb3924

Alternate gene names: 83313023

Gene position: 4337036-4335744 (Counterclockwise)

Preceding gene: 83313024

Following gene: 83313022

Centisome position: 87.31

GC content: 67.36

Gene sequence:

>1293_bases
ATGTTGGACCAAGGGCCTCTCTTCCTGACCCTTTCAGTGATTGCCATCGTGGTGCTGCAGGCCGGTTCGGCGTTCTTCGC
CGGCACCGAGACGGCGCTGACCGCCGTGTCGCGCCCGGTCATGCACCAGTTGGAGCAGGACGGCAGTGCCCCCGCCCGGC
GGGTCAACCGTCTGATCGATGCCCGCCAGCGGCTGATCGGCGCCCTGCTGATCGGCAACAGCCTCACCCATACCCTGTCG
TCGTCGCTGGCCACCGGCGTGCTGGTCGGCCTGTTCGGCGACGCCGGCATCGCCTATGCCTCGGCCGGCATGACGGTGAT
CATCGTGGTGTTCGGCGAGGTGCTGCCCAAGACCTACGCCATCTACCACGCCAATCGCATGGCCTTGCTGTTCTCCGCGC
CGGTCACCGGCGTGGTGTGGATTCTGACCCCCTTCGTGCGCACCGTCGAGGTGGTGGTCATGGGGCTGTTCCGCCTGTTC
GGCGCCAAGTACTCCACCGCGGTCAGCGTCGAGGCCTCCATGATGGAGCTGAAAGGCGCCATCGAGGTTCATGCCGGCGA
GGAGGAGGTGCGCGAGGAGCGCCGCATGCTGCGCTCGATCCTGGAACTGGGCGACGTGGAAGTGGAGCAGGTGATGACCC
ACCGGCGCGGCGTGGTCACCGCCGATGCCGGCCTGCCCGCCGCCGAGATCCTGGAACTGGTGGTCAGCTCGCCCTTCTCG
CGCGTGCCGCTGTGGAAGGACGATCCCGACAACATCGTCGGCGTGGTCCACGCCAAGGACCTGCTGCGCGCCGTCCGCGC
CCTGGATGGCGAGCTGGACAAGCTGGACGTGGTCGAACTGGCCTCGCCCCCCTGGTTCATTCCCGATTCCACCACGCTGC
TCGAGCAGTTGCAGGCCTTCCGGTCGCGGCGCGAGCATTTCGCCCTGGTGGTGGACGAGTACGGCACCCTGATGGGGGTG
GTCACCCTGGAAGACATCCTGGAGGAGATCGTCGGCGATATCGCCGACGAGCACGACGTGGCGGTGGCCGGTGTGCGCCC
CCAGTCGGACGGTTCCTATATCGTCGACGGTTCGGTGACCATCCGCGACCTGAACCGCGAATTTGAATGGCGCCTGCCCG
ACGAGGAGGCCGCCACCATCGCCGGCCTGATCCTGCACGAGGCCCGGCAGATTCCCGATGTGGGCCAGGTCTTCCGCTTC
TACGGCTTCCGCTTCGAGATCGCCCGGCGCCAGCGCAACCAGATCACCTCCATCCGGGTGATGCCGCCGGCCCCCGCTCC
ATCGGTGACCTGA

Upstream 100 bases:

>100_bases
GCGACGTGCCGGAAGCCGAGCTGGCCTCCATGCTGGCGGAGATGGCGTCGGGGTATTAGAGCGGTGCGCACCCGGCAGGG
GCAATCAAGGGGATAAGGCG

Downstream 100 bases:

>100_bases
AAGGGCGGGCATCCTGCCCGCAGGGGGCTGAGTGAATCCGTTCACATCCCGTTAACTCCACATATGGTATTACAATGCCG
TGACGGGGACGATTTGTTGT

Product: Mg2+/Co2+ transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLDQGPLFLTLSVIAIVVLQAGSAFFAGTETALTAVSRPVMHQLEQDGSAPARRVNRLIDARQRLIGALLIGNSLTHTLS
SSLATGVLVGLFGDAGIAYASAGMTVIIVVFGEVLPKTYAIYHANRMALLFSAPVTGVVWILTPFVRTVEVVVMGLFRLF
GAKYSTAVSVEASMMELKGAIEVHAGEEEVREERRMLRSILELGDVEVEQVMTHRRGVVTADAGLPAAEILELVVSSPFS
RVPLWKDDPDNIVGVVHAKDLLRAVRALDGELDKLDVVELASPPWFIPDSTTLLEQLQAFRSRREHFALVVDEYGTLMGV
VTLEDILEEIVGDIADEHDVAVAGVRPQSDGSYIVDGSVTIRDLNREFEWRLPDEEAATIAGLILHEARQIPDVGQVFRF
YGFRFEIARRQRNQITSIRVMPPAPAPSVT

Sequences:

>Translated_430_residues
MLDQGPLFLTLSVIAIVVLQAGSAFFAGTETALTAVSRPVMHQLEQDGSAPARRVNRLIDARQRLIGALLIGNSLTHTLS
SSLATGVLVGLFGDAGIAYASAGMTVIIVVFGEVLPKTYAIYHANRMALLFSAPVTGVVWILTPFVRTVEVVVMGLFRLF
GAKYSTAVSVEASMMELKGAIEVHAGEEEVREERRMLRSILELGDVEVEQVMTHRRGVVTADAGLPAAEILELVVSSPFS
RVPLWKDDPDNIVGVVHAKDLLRAVRALDGELDKLDVVELASPPWFIPDSTTLLEQLQAFRSRREHFALVVDEYGTLMGV
VTLEDILEEIVGDIADEHDVAVAGVRPQSDGSYIVDGSVTIRDLNREFEWRLPDEEAATIAGLILHEARQIPDVGQVFRF
YGFRFEIARRQRNQITSIRVMPPAPAPSVT
>Mature_430_residues
MLDQGPLFLTLSVIAIVVLQAGSAFFAGTETALTAVSRPVMHQLEQDGSAPARRVNRLIDARQRLIGALLIGNSLTHTLS
SSLATGVLVGLFGDAGIAYASAGMTVIIVVFGEVLPKTYAIYHANRMALLFSAPVTGVVWILTPFVRTVEVVVMGLFRLF
GAKYSTAVSVEASMMELKGAIEVHAGEEEVREERRMLRSILELGDVEVEQVMTHRRGVVTADAGLPAAEILELVVSSPFS
RVPLWKDDPDNIVGVVHAKDLLRAVRALDGELDKLDVVELASPPWFIPDSTTLLEQLQAFRSRREHFALVVDEYGTLMGV
VTLEDILEEIVGDIADEHDVAVAGVRPQSDGSYIVDGSVTIRDLNREFEWRLPDEEAATIAGLILHEARQIPDVGQVFRF
YGFRFEIARRQRNQITSIRVMPPAPAPSVT

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=439, Percent_Identity=25.7403189066059, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI94681046, Length=340, Percent_Identity=28.2352941176471, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI40068053, Length=352, Percent_Identity=25.8522727272727, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40068055, Length=352, Percent_Identity=25.8522727272727, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI145693175, Length=404, Percent_Identity=33.6633663366337, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1790664, Length=438, Percent_Identity=24.6575342465753, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87082033, Length=336, Percent_Identity=29.1666666666667, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786879, Length=246, Percent_Identity=31.3008130081301, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1788119, Length=339, Percent_Identity=27.7286135693215, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6324512, Length=345, Percent_Identity=25.5072463768116, Blast_Score=87, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47000; Mature: 47000

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDQGPLFLTLSVIAIVVLQAGSAFFAGTETALTAVSRPVMHQLEQDGSAPARRVNRLID
CCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ARQRLIGALLIGNSLTHTLSSSLATGVLVGLFGDAGIAYASAGMTVIIVVFGEVLPKTYA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHE
IYHANRMALLFSAPVTGVVWILTPFVRTVEVVVMGLFRLFGAKYSTAVSVEASMMELKGA
EEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC
IEVHAGEEEVREERRMLRSILELGDVEVEQVMTHRRGVVTADAGLPAAEILELVVSSPFS
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCC
RVPLWKDDPDNIVGVVHAKDLLRAVRALDGELDKLDVVELASPPWFIPDSTTLLEQLQAF
CCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEHEEECCCCCCCCCCHHHHHHHHHH
RSRREHFALVVDEYGTLMGVVTLEDILEEIVGDIADEHDVAVAGVRPQSDGSYIVDGSVT
HHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCEE
IRDLNREFEWRLPDEEAATIAGLILHEARQIPDVGQVFRFYGFRFEIARRQRNQITSIRV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCEEEE
MPPAPAPSVT
ECCCCCCCCC
>Mature Secondary Structure
MLDQGPLFLTLSVIAIVVLQAGSAFFAGTETALTAVSRPVMHQLEQDGSAPARRVNRLID
CCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ARQRLIGALLIGNSLTHTLSSSLATGVLVGLFGDAGIAYASAGMTVIIVVFGEVLPKTYA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHHE
IYHANRMALLFSAPVTGVVWILTPFVRTVEVVVMGLFRLFGAKYSTAVSVEASMMELKGA
EEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC
IEVHAGEEEVREERRMLRSILELGDVEVEQVMTHRRGVVTADAGLPAAEILELVVSSPFS
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCC
RVPLWKDDPDNIVGVVHAKDLLRAVRALDGELDKLDVVELASPPWFIPDSTTLLEQLQAF
CCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEHEEECCCCCCCCCCHHHHHHHHHH
RSRREHFALVVDEYGTLMGVVTLEDILEEIVGDIADEHDVAVAGVRPQSDGSYIVDGSVT
HHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCEE
IRDLNREFEWRLPDEEAATIAGLILHEARQIPDVGQVFRFYGFRFEIARRQRNQITSIRV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCEEEE
MPPAPAPSVT
ECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]