Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312876

Identifier: 83312876

GI number: 83312876

Start: 4158935

End: 4160386

Strand: Reverse

Name: 83312876

Synonym: amb3777

Alternate gene names: NA

Gene position: 4160386-4158935 (Counterclockwise)

Preceding gene: 83312879

Following gene: 83312874

Centisome position: 83.76

GC content: 57.78

Gene sequence:

>1452_bases
ATGGGCAACGTGGTTCATATCCTCGACGGCGCTGTGGCGCTCTATCAGCGCGAATATATGGGCACGCAGACATGGACAGC
GCGCTACAAAATTCGCAACATGAAAGGCTATGTGACCAAAGCGACAGGCAAGCGCGACTTGGAGGAGGCCAAGGACGTTG
CCCGCGAGAAGCACGCCGAACTGACCGCCGATTTCCGCCGTGGCATTCCCATTCGCAGCCGCACCTTCAAACTGGCCGTC
AACGCCTACTTGGAAGATCTGCAAACGGCAGTTCTGACGGGCAAGGCCACGGAACGGACGATGAAGGACAACAAGGCGGT
CATAAACCGCTATCTGCTGCCCTACTTTGAAAGCAAGGCCATTGACGCTATCAGGCAGGAGCAGATTGAGGCGTACAAGC
TGTGGCGGCTGACATATTGGACGGAAGGGCCAGGGGCAAAGGACACTTCTCGCGAATACATGCGCGGCGGCAAGCTCATC
AAGGCCAAGCGCCCGCAAAAGACACAGACGCAGCGCTCGGGCGAAATCTTCATCCTCAAAGCCATCTTCAATTCGGCGCG
TAAGCGCGGATGGGTGAAGCGCGATCAGATCCCCGACATTGATGACGAACAGCGCAAAACTGCGCGTCGGCCTGCGTTCA
CGGAAGCGGAGTGGAAGCGCATCCTTGCGGCCATGCCCACCTATATAAATGGCGCGAAGGGCTTGGTGGTGGAGGCCGAC
CGCAAGATGGTCTGCGCCTACGTGGAGTTCATGTTTGAAACAGGGCTGCGGCCAGGGAAAGAGCACCAGCAGCTGACATG
GGCGGATTGCGAACTGATCACCAACAAGGCTGAGGTTGGCGTGGTCAGAGAAACCCACGTTCATATCCGCGACGACACCA
AGACGGGGAAGCGCACGGCGGTCAGCAGCGAGGCAACATGGGATATTTTGAACCAGATTAAGGCGTTTTCGCCGTGGACC
AAGCCCAGCGACCCCATTTTTGCCGACCGCAAGACGGGCAAGCCCATATTGAGCTTTGCGAAGGGCGTGTCGGCGCTGCT
GAAGACGGTCGGGCTGGAATACGACCGCAATGGCGTGAAGTTCTCGCCATACAGTCTGCGCCACACCTATGCCACTGACC
GCCTTATCAAAGGCAGGCTGGACGTTTGGCTGCTGGCGAAGAACATGGGCACCAGCGTGGAGATGATCCGCAAGCACTAT
GGGCAGGACGAGCCAAAGCAGCGGTCGCACGAACTCATCCACGACAAGGTGCAATTGGACACGGATGCCATTTTGGCGCT
TTTGAGGGATAATCCCGCGCTTGCAGCGGAGATATTGAGCAAGGCCAATTTGCCCGAGGGACCGACATACGATCCCGACG
CGCCAGTTGTTAAGCCCGATCCCAATGCGCCGCGCAAGCGCAAGAAGTTCAGGCTGACCGACATGATTGATAAGCCAAAA
GACCCCGAGTGA

Upstream 100 bases:

>100_bases
TGTCAAAAAACCGTTAGCAGTACATTAGCAGCGCTCAAACGCTGTCCAGCGCGGATTTTCCCACGCTGCGCCGCAAAAAT
TGAGCGTTTGCGAGGCTTTG

Downstream 100 bases:

>100_bases
GTGTCGTGTTACACGACAGGCGCACCTTATATATAGGCCGCCGTCGCTTTGGCCCTTTGCGCGTCGTACACGCCGCCGAT
TTGGCTGCCCAGCAGTACGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Integrase Family Protein; Phage Integrase; Tyrosine Recombinase XerD; Phage DNA Recombinase

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAV
NAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLI
KAKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD
RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWT
KPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHY
GQDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK
DPE

Sequences:

>Translated_483_residues
MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAV
NAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLI
KAKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD
RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWT
KPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHY
GQDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK
DPE
>Mature_482_residues
GNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAVN
AYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIK
AKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEADR
KMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWTK
PSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYG
QDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPKD
PE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55205; Mature: 55074

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAE
CCCEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHH
LTADFRRGIPIRSRTFKLAVNAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIKAKRPQKTQTQRSGEIFILK
HHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCEEECCCCCHHHHHCCCCEEEEH
AIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD
HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTA
CHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCHHCCEEEEEEEEEECCCCCCCCCC
VSSEATWDILNQIKAFSPWTKPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVK
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
FSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYGQDEPKQRSHELIHDKVQLD
ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCC
DPE
CCC
>Mature Secondary Structure 
GNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAE
CCEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHH
LTADFRRGIPIRSRTFKLAVNAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIKAKRPQKTQTQRSGEIFILK
HHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCEEECCCCCHHHHHCCCCEEEEH
AIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD
HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC
RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTA
CHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCHHCCEEEEEEEEEECCCCCCCCCC
VSSEATWDILNQIKAFSPWTKPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVK
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
FSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYGQDEPKQRSHELIHDKVQLD
ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCC
DPE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA