| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312876
Identifier: 83312876
GI number: 83312876
Start: 4158935
End: 4160386
Strand: Reverse
Name: 83312876
Synonym: amb3777
Alternate gene names: NA
Gene position: 4160386-4158935 (Counterclockwise)
Preceding gene: 83312879
Following gene: 83312874
Centisome position: 83.76
GC content: 57.78
Gene sequence:
>1452_bases ATGGGCAACGTGGTTCATATCCTCGACGGCGCTGTGGCGCTCTATCAGCGCGAATATATGGGCACGCAGACATGGACAGC GCGCTACAAAATTCGCAACATGAAAGGCTATGTGACCAAAGCGACAGGCAAGCGCGACTTGGAGGAGGCCAAGGACGTTG CCCGCGAGAAGCACGCCGAACTGACCGCCGATTTCCGCCGTGGCATTCCCATTCGCAGCCGCACCTTCAAACTGGCCGTC AACGCCTACTTGGAAGATCTGCAAACGGCAGTTCTGACGGGCAAGGCCACGGAACGGACGATGAAGGACAACAAGGCGGT CATAAACCGCTATCTGCTGCCCTACTTTGAAAGCAAGGCCATTGACGCTATCAGGCAGGAGCAGATTGAGGCGTACAAGC TGTGGCGGCTGACATATTGGACGGAAGGGCCAGGGGCAAAGGACACTTCTCGCGAATACATGCGCGGCGGCAAGCTCATC AAGGCCAAGCGCCCGCAAAAGACACAGACGCAGCGCTCGGGCGAAATCTTCATCCTCAAAGCCATCTTCAATTCGGCGCG TAAGCGCGGATGGGTGAAGCGCGATCAGATCCCCGACATTGATGACGAACAGCGCAAAACTGCGCGTCGGCCTGCGTTCA CGGAAGCGGAGTGGAAGCGCATCCTTGCGGCCATGCCCACCTATATAAATGGCGCGAAGGGCTTGGTGGTGGAGGCCGAC CGCAAGATGGTCTGCGCCTACGTGGAGTTCATGTTTGAAACAGGGCTGCGGCCAGGGAAAGAGCACCAGCAGCTGACATG GGCGGATTGCGAACTGATCACCAACAAGGCTGAGGTTGGCGTGGTCAGAGAAACCCACGTTCATATCCGCGACGACACCA AGACGGGGAAGCGCACGGCGGTCAGCAGCGAGGCAACATGGGATATTTTGAACCAGATTAAGGCGTTTTCGCCGTGGACC AAGCCCAGCGACCCCATTTTTGCCGACCGCAAGACGGGCAAGCCCATATTGAGCTTTGCGAAGGGCGTGTCGGCGCTGCT GAAGACGGTCGGGCTGGAATACGACCGCAATGGCGTGAAGTTCTCGCCATACAGTCTGCGCCACACCTATGCCACTGACC GCCTTATCAAAGGCAGGCTGGACGTTTGGCTGCTGGCGAAGAACATGGGCACCAGCGTGGAGATGATCCGCAAGCACTAT GGGCAGGACGAGCCAAAGCAGCGGTCGCACGAACTCATCCACGACAAGGTGCAATTGGACACGGATGCCATTTTGGCGCT TTTGAGGGATAATCCCGCGCTTGCAGCGGAGATATTGAGCAAGGCCAATTTGCCCGAGGGACCGACATACGATCCCGACG CGCCAGTTGTTAAGCCCGATCCCAATGCGCCGCGCAAGCGCAAGAAGTTCAGGCTGACCGACATGATTGATAAGCCAAAA GACCCCGAGTGA
Upstream 100 bases:
>100_bases TGTCAAAAAACCGTTAGCAGTACATTAGCAGCGCTCAAACGCTGTCCAGCGCGGATTTTCCCACGCTGCGCCGCAAAAAT TGAGCGTTTGCGAGGCTTTG
Downstream 100 bases:
>100_bases GTGTCGTGTTACACGACAGGCGCACCTTATATATAGGCCGCCGTCGCTTTGGCCCTTTGCGCGTCGTACACGCCGCCGAT TTGGCTGCCCAGCAGTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Integrase Family Protein; Phage Integrase; Tyrosine Recombinase XerD; Phage DNA Recombinase
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAV NAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLI KAKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWT KPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHY GQDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK DPE
Sequences:
>Translated_483_residues MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAV NAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLI KAKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWT KPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHY GQDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK DPE >Mature_482_residues GNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAELTADFRRGIPIRSRTFKLAVN AYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKAIDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIK AKRPQKTQTQRSGEIFILKAIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEADR KMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTAVSSEATWDILNQIKAFSPWTK PSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVKFSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYG QDEPKQRSHELIHDKVQLDTDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPKD PE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55205; Mature: 55074
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAE CCCEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHH LTADFRRGIPIRSRTFKLAVNAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIKAKRPQKTQTQRSGEIFILK HHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCEEECCCCCHHHHHCCCCEEEEH AIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTA CHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCHHCCEEEEEEEEEECCCCCCCCCC VSSEATWDILNQIKAFSPWTKPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVK CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE FSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYGQDEPKQRSHELIHDKVQLD ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC TDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCC DPE CCC >Mature Secondary Structure GNVVHILDGAVALYQREYMGTQTWTARYKIRNMKGYVTKATGKRDLEEAKDVAREKHAE CCEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHH LTADFRRGIPIRSRTFKLAVNAYLEDLQTAVLTGKATERTMKDNKAVINRYLLPYFESKA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDAIRQEQIEAYKLWRLTYWTEGPGAKDTSREYMRGGKLIKAKRPQKTQTQRSGEIFILK HHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCEEECCCCCHHHHHCCCCEEEEH AIFNSARKRGWVKRDQIPDIDDEQRKTARRPAFTEAEWKRILAAMPTYINGAKGLVVEAD HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC RKMVCAYVEFMFETGLRPGKEHQQLTWADCELITNKAEVGVVRETHVHIRDDTKTGKRTA CHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCHHCCEEEEEEEEEECCCCCCCCCC VSSEATWDILNQIKAFSPWTKPSDPIFADRKTGKPILSFAKGVSALLKTVGLEYDRNGVK CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE FSPYSLRHTYATDRLIKGRLDVWLLAKNMGTSVEMIRKHYGQDEPKQRSHELIHDKVQLD ECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC TDAILALLRDNPALAAEILSKANLPEGPTYDPDAPVVKPDPNAPRKRKKFRLTDMIDKPK HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCC DPE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA