| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312874
Identifier: 83312874
GI number: 83312874
Start: 4155777
End: 4157465
Strand: Reverse
Name: 83312874
Synonym: amb3775
Alternate gene names: NA
Gene position: 4157465-4155777 (Counterclockwise)
Preceding gene: 83312876
Following gene: 83312873
Centisome position: 83.7
GC content: 54.59
Gene sequence:
>1689_bases ATGTCCGAGGTTGAGGACGAGGGCTTTCAGGAAGCACTCGCTGTTGTCGAGGCTGAGATCAAGGCTTTTGACGATAAAGT AGCCGCTGAAGCAACCTCGCAAGCTGAAAAAGCCACAGCGCTTTATGCCGCCCTTGCACAAGCATTCAAGTTTCATCGCG ATTGGGCGGGAAAGCCGCCCTATCTGCACCTGCTTGAGAACAAGAAGGTGAGGGCAACCGCTCGGGGAACAAAAGCCAGC CCTTATATTCCAACTCTAAAGGCATTCTTCGATCCGTCGTTGGATGAGTGCTCACCGACCACGGATGACGAGAAAAAGGA CAAAGCCCGCCGTCAAAAAGCGATCAGCACCTATAGCGCCGTGCTGGATTATGCGTCGCATGAAAGCGCTGCCGATGTAG CGGAATTTATTGCGAATGAAGGGGGAATCGAAACTGCTCGGGTGAAGTGGAAGGAAAAGCGTGACGCAGAACCCGATGCG GTTGAGCGCAGAAGGACGGCCAGTGAGAGGCGCGAGCAACAGCTGAAAAGCGGCTTGGCTAAACTTCAAAAGGGAATGCG GACTGCACTCCCGAAAATGCCTGAATTCAAAGGGACAACGCAGCTCGCCGCTATCTATTTTGATAATGCGGGGGTCGCTC ACTATCTCGGCTTGGCGGAACGTGACGACAGCGCAAAAGCCTTGCTGGACAAGTTCCTGATTTCCCACGGTGACGCGCCA AAGACAGACGTGAATTCAGCCACGGCAACGAATGCGGAACGGAACGATCTTGATAAGCTGCTGGCCCTTTTGAGCGTTGG CGCAGTCGCCCACCCCAAAGACGCAAACGTGCGGATCAAAAACGGCAAGAAGGGCTGTGAGATACAGGCATCTCATGGCA GCTACGACACGTGCATGTTCTCCGCCACGCTACCTCACCAAGACTTCCTCCCAGTCGGCACATACTGGTTTGGGGCAAAT GCCATAGGCTGCATGAAGAGGCTCGCCATTCTGGGAAAGCATGGTGCCAAATTCACCATCACTGGCCCGTCAAAGATTGA TGGCATTGATGCGGCAGTGGAAATCACCATCACCGACTATCAAGCTGGCATCGCCGCCATCTCGGCTAAAACCCCAGATC AGCCGTGGGATTGGCGTGATGTGATTCCCCACACTGATATCCGCCGCATTGCGGAAAAGGACGGTGTCGCGACGATTACC TATGTCTCCACCGTGGAAAAGATGGCTCGCATCAAGCTGATCAACGCATGGGACGCGGAAGCCAAGGTCGAAGGGGATTT CGCAACGTGGCTGCAATCCACTCTTGGCATCAGCAAGAAAGACCCAAACCAGCGGTTGGTAAAAGCCATCAGCGACGGAA CGCGAAAGACCACGATGTTCCGCATCACGGAAAAAGATTGGACTGTGCTCGATAGCAAGGGCGATGTGACCACCCATACC TTCTCGTCGCCCATTGGCGCTGCGGGGTTCGTCACTGAGTTTGTGCTCGGCTCAAAGGACATTCTTCCCGCCATTGACGC AGTGAAGGCACTGGTGGATGGCGGCAGCACGACCATCGCGCTCGTCAATAAGCTGATGCGCGTTCAGTGCAAGAAGGGCA GCTTTATGGCTGAGGTCTTCATCCCGTCCATTGGCACTGATGGGCGGCATCAGGCGTATACGGAGTTTGACTCTCCGTTT TCTCAATGA
Upstream 100 bases:
>100_bases ACAGTCGCAATCAAACGAACATACATGCTGTATGTTCGTTGCCTCCCCAGGCTCATATGGGCACTATGGGGCTGAGCAAT TTGCTGGATAGGGGGCTTGC
Downstream 100 bases:
>100_bases CATTGAATGTGAGAGCCTTCAATGAATTACATCCGTGCCAGCTTCAAATCATTGCGCCAGTTGCGTCGTGAAGCCCCCAC GCCGGAAGCGGCCCGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSEVEDEGFQEALAVVEAEIKAFDDKVAAEATSQAEKATALYAALAQAFKFHRDWAGKPPYLHLLENKKVRATARGTKAS PYIPTLKAFFDPSLDECSPTTDDEKKDKARRQKAISTYSAVLDYASHESAADVAEFIANEGGIETARVKWKEKRDAEPDA VERRRTASERREQQLKSGLAKLQKGMRTALPKMPEFKGTTQLAAIYFDNAGVAHYLGLAERDDSAKALLDKFLISHGDAP KTDVNSATATNAERNDLDKLLALLSVGAVAHPKDANVRIKNGKKGCEIQASHGSYDTCMFSATLPHQDFLPVGTYWFGAN AIGCMKRLAILGKHGAKFTITGPSKIDGIDAAVEITITDYQAGIAAISAKTPDQPWDWRDVIPHTDIRRIAEKDGVATIT YVSTVEKMARIKLINAWDAEAKVEGDFATWLQSTLGISKKDPNQRLVKAISDGTRKTTMFRITEKDWTVLDSKGDVTTHT FSSPIGAAGFVTEFVLGSKDILPAIDAVKALVDGGSTTIALVNKLMRVQCKKGSFMAEVFIPSIGTDGRHQAYTEFDSPF SQ
Sequences:
>Translated_562_residues MSEVEDEGFQEALAVVEAEIKAFDDKVAAEATSQAEKATALYAALAQAFKFHRDWAGKPPYLHLLENKKVRATARGTKAS PYIPTLKAFFDPSLDECSPTTDDEKKDKARRQKAISTYSAVLDYASHESAADVAEFIANEGGIETARVKWKEKRDAEPDA VERRRTASERREQQLKSGLAKLQKGMRTALPKMPEFKGTTQLAAIYFDNAGVAHYLGLAERDDSAKALLDKFLISHGDAP KTDVNSATATNAERNDLDKLLALLSVGAVAHPKDANVRIKNGKKGCEIQASHGSYDTCMFSATLPHQDFLPVGTYWFGAN AIGCMKRLAILGKHGAKFTITGPSKIDGIDAAVEITITDYQAGIAAISAKTPDQPWDWRDVIPHTDIRRIAEKDGVATIT YVSTVEKMARIKLINAWDAEAKVEGDFATWLQSTLGISKKDPNQRLVKAISDGTRKTTMFRITEKDWTVLDSKGDVTTHT FSSPIGAAGFVTEFVLGSKDILPAIDAVKALVDGGSTTIALVNKLMRVQCKKGSFMAEVFIPSIGTDGRHQAYTEFDSPF SQ >Mature_561_residues SEVEDEGFQEALAVVEAEIKAFDDKVAAEATSQAEKATALYAALAQAFKFHRDWAGKPPYLHLLENKKVRATARGTKASP YIPTLKAFFDPSLDECSPTTDDEKKDKARRQKAISTYSAVLDYASHESAADVAEFIANEGGIETARVKWKEKRDAEPDAV ERRRTASERREQQLKSGLAKLQKGMRTALPKMPEFKGTTQLAAIYFDNAGVAHYLGLAERDDSAKALLDKFLISHGDAPK TDVNSATATNAERNDLDKLLALLSVGAVAHPKDANVRIKNGKKGCEIQASHGSYDTCMFSATLPHQDFLPVGTYWFGANA IGCMKRLAILGKHGAKFTITGPSKIDGIDAAVEITITDYQAGIAAISAKTPDQPWDWRDVIPHTDIRRIAEKDGVATITY VSTVEKMARIKLINAWDAEAKVEGDFATWLQSTLGISKKDPNQRLVKAISDGTRKTTMFRITEKDWTVLDSKGDVTTHTF SSPIGAAGFVTEFVLGSKDILPAIDAVKALVDGGSTTIALVNKLMRVQCKKGSFMAEVFIPSIGTDGRHQAYTEFDSPFS Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61328; Mature: 61197
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVEDEGFQEALAVVEAEIKAFDDKVAAEATSQAEKATALYAALAQAFKFHRDWAGKPP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YLHLLENKKVRATARGTKASPYIPTLKAFFDPSLDECSPTTDDEKKDKARRQKAISTYSA EEEEECCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLDYASHESAADVAEFIANEGGIETARVKWKEKRDAEPDAVERRRTASERREQQLKSGLA HHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KLQKGMRTALPKMPEFKGTTQLAAIYFDNAGVAHYLGLAERDDSAKALLDKFLISHGDAP HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC KTDVNSATATNAERNDLDKLLALLSVGAVAHPKDANVRIKNGKKGCEIQASHGSYDTCMF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCCCCCEEEE SATLPHQDFLPVGTYWFGANAIGCMKRLAILGKHGAKFTITGPSKIDGIDAAVEITITDY EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEEEC QAGIAAISAKTPDQPWDWRDVIPHTDIRRIAEKDGVATITYVSTVEKMARIKLINAWDAE CCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHEEEEECCCCC AKVEGDFATWLQSTLGISKKDPNQRLVKAISDGTRKTTMFRITEKDWTVLDSKGDVTTHT CEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCEEEEE FSSPIGAAGFVTEFVLGSKDILPAIDAVKALVDGGSTTIALVNKLMRVQCKKGSFMAEVF CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEE IPSIGTDGRHQAYTEFDSPFSQ ECCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SEVEDEGFQEALAVVEAEIKAFDDKVAAEATSQAEKATALYAALAQAFKFHRDWAGKPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YLHLLENKKVRATARGTKASPYIPTLKAFFDPSLDECSPTTDDEKKDKARRQKAISTYSA EEEEECCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLDYASHESAADVAEFIANEGGIETARVKWKEKRDAEPDAVERRRTASERREQQLKSGLA HHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KLQKGMRTALPKMPEFKGTTQLAAIYFDNAGVAHYLGLAERDDSAKALLDKFLISHGDAP HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCC KTDVNSATATNAERNDLDKLLALLSVGAVAHPKDANVRIKNGKKGCEIQASHGSYDTCMF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCCCCCEEEE SATLPHQDFLPVGTYWFGANAIGCMKRLAILGKHGAKFTITGPSKIDGIDAAVEITITDY EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEEEC QAGIAAISAKTPDQPWDWRDVIPHTDIRRIAEKDGVATITYVSTVEKMARIKLINAWDAE CCCEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHEEEEECCCCC AKVEGDFATWLQSTLGISKKDPNQRLVKAISDGTRKTTMFRITEKDWTVLDSKGDVTTHT CEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCEEEEE FSSPIGAAGFVTEFVLGSKDILPAIDAVKALVDGGSTTIALVNKLMRVQCKKGSFMAEVF CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEE IPSIGTDGRHQAYTEFDSPFSQ ECCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA