| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is phnA [H]
Identifier: 83312830
GI number: 83312830
Start: 4106081
End: 4106428
Strand: Reverse
Name: phnA [H]
Synonym: amb3731
Alternate gene names: 83312830
Gene position: 4106428-4106081 (Counterclockwise)
Preceding gene: 83312831
Following gene: 83312824
Centisome position: 82.67
GC content: 53.74
Gene sequence:
>348_bases ATGGGCGATGAGTTGAAGTGCCCCAAATGTTCGTCTGAACATGTCTATTCGGATGGCAGTCTGATGATTTGCCCGGAATG CGCCCATGAATGGAACCCCGACACCGCTGCGGAGGCCACTGACGGAAGCGTGGTCAAGGATGCCAACGGCAATGTGTTGG CCAATGGCGATTCGGTCACCGTGATTAAGGATCTAAAGGTCAAGGGTTCGTCCCTGGTGGTCAAGGGCGGCACCAAGGTG AAGAACATCCGCCTAGTGACCGATGCAGTCGATGGTCATGACATCGCCTGCAAGATCGACGGGATCGGCGCTATGAACTT AAAGTCAGAATTCGTGAAGAAAGCCTAA
Upstream 100 bases:
>100_bases GGTGACCCCGGCATTCTCCAAGATAGGCGCGCGATCCTTGTGCCGCCATGGCAACAAGGTATGCTAGCCTTTGAGTTTGT CGTGAATACGAGGTCGATAA
Downstream 100 bases:
>100_bases GGTGCAATGCGTCTTCGTCATCAAATCCTCCGTGCCTCATTTTTAGGGACGAAGGCGTCTGCGAAGCTAGGGGCTATTCG CGGGTCTCATTCATTGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGDELKCPKCSSEHVYSDGSLMICPECAHEWNPDTAAEATDGSVVKDANGNVLANGDSVTVIKDLKVKGSSLVVKGGTKV KNIRLVTDAVDGHDIACKIDGIGAMNLKSEFVKKA
Sequences:
>Translated_115_residues MGDELKCPKCSSEHVYSDGSLMICPECAHEWNPDTAAEATDGSVVKDANGNVLANGDSVTVIKDLKVKGSSLVVKGGTKV KNIRLVTDAVDGHDIACKIDGIGAMNLKSEFVKKA >Mature_114_residues GDELKCPKCSSEHVYSDGSLMICPECAHEWNPDTAAEATDGSVVKDANGNVLANGDSVTVIKDLKVKGSSLVVKGGTKVK NIRLVTDAVDGHDIACKIDGIGAMNLKSEFVKKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=108, Percent_Identity=65.7407407407407, Blast_Score=143, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 12062; Mature: 11931
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDELKCPKCSSEHVYSDGSLMICPECAHEWNPDTAAEATDGSVVKDANGNVLANGDSVT CCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEE VIKDLKVKGSSLVVKGGTKVKNIRLVTDAVDGHDIACKIDGIGAMNLKSEFVKKA EEEEEEECCCEEEEECCCEEEEEEEEEECCCCCEEEEEECCCCEECCHHHHHHCC >Mature Secondary Structure GDELKCPKCSSEHVYSDGSLMICPECAHEWNPDTAAEATDGSVVKDANGNVLANGDSVT CCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEE VIKDLKVKGSSLVVKGGTKVKNIRLVTDAVDGHDIACKIDGIGAMNLKSEFVKKA EEEEEEECCCEEEEECCCEEEEEEEEEECCCCCEEEEEECCCCEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]