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The map label for this gene is 83312771

Identifier: 83312771

GI number: 83312771

Start: 4033347

End: 4034711

Strand: Reverse

Name: 83312771

Synonym: amb3672

Alternate gene names: NA

Gene position: 4034711-4033347 (Counterclockwise)

Preceding gene: 83312772

Following gene: 83312770

Centisome position: 81.23

GC content: 58.97

Gene sequence:

>1365_bases
ATGCGGAACAAATACGCATTCCCTGAGTTGCCCGGCTTAGTGATCTATCAGCGTGAAGATGCCGGGGACAATTGGTACGT
CCGCTTTCCCCTCAAGGTTAAGGGCGTCCGCCCTTACAAATTCCAGCTTCTCCGCGAAGGGGGCGAGAAGGACGGCGCCC
CGACGACAAGCATCGACACGGCCAAACAATGGGCCTTGATGCAGTACGGCGCTGTATCGAACGCCGTGAAGAAGGGTGAT
GTCGGATCGCTGTTCGACAAGACCCTGGACGAGGTGATCTCGGAATATATCGCCGAGGTCAAAGCCGACGCCACGCGCGG
CAAGTCAGCCATCAAGCGCGCCGTCCATTCGGCCATTCCGCTACGACGCTATTTCAGGGAATGCGCGGTGCGGATCATCG
GACGGCTCACCACCGAGATCGCCAAGGGCTATATCAACTGGCGGCTGGCACAGAGCTCTTACCGTGGCACTCCCATCGCG
CCGACGACGGTGATGCACGAGATGCAGATCCTCAACCAGATCTTGGATCATGCCGTTGATAAGCGGTACATCCGCTACCA
GGATCGCCCCAAGGCGACCTTCAGCGTCAGCCTGAAGAAGCGGACCAAGCGCGATGGCTTCACCTCGGACGAATGGAAAA
TCCTGGAAGACTGGCTGTGGGAATGGCCCACGCTGACGGTGAACGGCAGAACGCGAGAGCGCCGCGAGCATCTGCGGGAT
TACTGCATCTTCCTCTATTACAGCGGCATGCGCCCAGGCGAGGCCATGAACCTCCAGAACCGCGACATCCACATCAATGA
TACCGCCAATGGCGAAGAGACGGTCATTCTCGACCTCAATGAAGGCAAGACCGGGGAGCGGGACGTGGTGGCCATGCCCG
AGGTCGCCGATGCCATCCGGCGGCTGAGAAAGCGGGAAATCGCGACTGGCCCAAACGACTTCCTGTTCATCAACGAGCGT
GGCGAGAAGCTCGGTGTGCCCAGCGCCACGTTCTCCAGGATGCTTGAAGACCTGTATCTTGAGAAGGAGGCCGACCTCCG
GATCGGACGGACGAAGCAGAAGCGGACACCGTATTCACTCCGCCACACCTATGCCGATACCCGCCTCATGGAAGGCGACG
TCAATGTCTTCGACCTGTCGGAGAACATGGGCACCTCGGTCCAGATGATTAAGCACCACTACAAGCATGCCAGGAACAGC
GCCAAGGCCAAGGAGCTGACGCATGTAAAGCCCGAATTCAGGCCGAAGACCGGAACCGTCGAACAGCTTGTTGACGCGGC
GCGGAAGGCGGGACGAAAGACGGCAAAGCCTAAGCCGAAGGGGCACCGCTTTCCCTATTTGGTTCTCGCTGAGGATGAAG
AATAG

Upstream 100 bases:

>100_bases
TTAATACACAGTCATTACACAGAAATGCGGTTGCGTTAGCTTTGTGATTTGCAACTAAGGATAGTTCATGCCAGGGAAGA
GCCGAGGCAAGGGCAAAGGA

Downstream 100 bases:

>100_bases
GTCTCCGTAGACGCCCAGCGCGGCCCACCGCTATAGCAGCGCAACGGGCGCAACGCCCACTTCGGACACGCGCCCTCAGC
CACAGCGGGAGCCGCATGGA

Product: tyrosine recombinase xerD

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Tyrosine Recombinase XerD; Integrase Family Protein

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRNKYAFPELPGLVIYQREDAGDNWYVRFPLKVKGVRPYKFQLLREGGEKDGAPTTSIDTAKQWALMQYGAVSNAVKKGD
VGSLFDKTLDEVISEYIAEVKADATRGKSAIKRAVHSAIPLRRYFRECAVRIIGRLTTEIAKGYINWRLAQSSYRGTPIA
PTTVMHEMQILNQILDHAVDKRYIRYQDRPKATFSVSLKKRTKRDGFTSDEWKILEDWLWEWPTLTVNGRTRERREHLRD
YCIFLYYSGMRPGEAMNLQNRDIHINDTANGEETVILDLNEGKTGERDVVAMPEVADAIRRLRKREIATGPNDFLFINER
GEKLGVPSATFSRMLEDLYLEKEADLRIGRTKQKRTPYSLRHTYADTRLMEGDVNVFDLSENMGTSVQMIKHHYKHARNS
AKAKELTHVKPEFRPKTGTVEQLVDAARKAGRKTAKPKPKGHRFPYLVLAEDEE

Sequences:

>Translated_454_residues
MRNKYAFPELPGLVIYQREDAGDNWYVRFPLKVKGVRPYKFQLLREGGEKDGAPTTSIDTAKQWALMQYGAVSNAVKKGD
VGSLFDKTLDEVISEYIAEVKADATRGKSAIKRAVHSAIPLRRYFRECAVRIIGRLTTEIAKGYINWRLAQSSYRGTPIA
PTTVMHEMQILNQILDHAVDKRYIRYQDRPKATFSVSLKKRTKRDGFTSDEWKILEDWLWEWPTLTVNGRTRERREHLRD
YCIFLYYSGMRPGEAMNLQNRDIHINDTANGEETVILDLNEGKTGERDVVAMPEVADAIRRLRKREIATGPNDFLFINER
GEKLGVPSATFSRMLEDLYLEKEADLRIGRTKQKRTPYSLRHTYADTRLMEGDVNVFDLSENMGTSVQMIKHHYKHARNS
AKAKELTHVKPEFRPKTGTVEQLVDAARKAGRKTAKPKPKGHRFPYLVLAEDEE
>Mature_454_residues
MRNKYAFPELPGLVIYQREDAGDNWYVRFPLKVKGVRPYKFQLLREGGEKDGAPTTSIDTAKQWALMQYGAVSNAVKKGD
VGSLFDKTLDEVISEYIAEVKADATRGKSAIKRAVHSAIPLRRYFRECAVRIIGRLTTEIAKGYINWRLAQSSYRGTPIA
PTTVMHEMQILNQILDHAVDKRYIRYQDRPKATFSVSLKKRTKRDGFTSDEWKILEDWLWEWPTLTVNGRTRERREHLRD
YCIFLYYSGMRPGEAMNLQNRDIHINDTANGEETVILDLNEGKTGERDVVAMPEVADAIRRLRKREIATGPNDFLFINER
GEKLGVPSATFSRMLEDLYLEKEADLRIGRTKQKRTPYSLRHTYADTRLMEGDVNVFDLSENMGTSVQMIKHHYKHARNS
AKAKELTHVKPEFRPKTGTVEQLVDAARKAGRKTAKPKPKGHRFPYLVLAEDEE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52298; Mature: 52298

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKYAFPELPGLVIYQREDAGDNWYVRFPLKVKGVRPYKFQLLREGGEKDGAPTTSIDT
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHH
AKQWALMQYGAVSNAVKKGDVGSLFDKTLDEVISEYIAEVKADATRGKSAIKRAVHSAIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRRYFRECAVRIIGRLTTEIAKGYINWRLAQSSYRGTPIAPTTVMHEMQILNQILDHAVD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KRYIRYQDRPKATFSVSLKKRTKRDGFTSDEWKILEDWLWEWPTLTVNGRTRERREHLRD
HHHHHCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
YCIFLYYSGMRPGEAMNLQNRDIHINDTANGEETVILDLNEGKTGERDVVAMPEVADAIR
HEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHHHHH
RLRKREIATGPNDFLFINERGEKLGVPSATFSRMLEDLYLEKEADLRIGRTKQKRTPYSL
HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
RHTYADTRLMEGDVNVFDLSENMGTSVQMIKHHYKHARNSAKAKELTHVKPEFRPKTGTV
HHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCH
EQLVDAARKAGRKTAKPKPKGHRFPYLVLAEDEE
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MRNKYAFPELPGLVIYQREDAGDNWYVRFPLKVKGVRPYKFQLLREGGEKDGAPTTSIDT
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHH
AKQWALMQYGAVSNAVKKGDVGSLFDKTLDEVISEYIAEVKADATRGKSAIKRAVHSAIP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRRYFRECAVRIIGRLTTEIAKGYINWRLAQSSYRGTPIAPTTVMHEMQILNQILDHAVD
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KRYIRYQDRPKATFSVSLKKRTKRDGFTSDEWKILEDWLWEWPTLTVNGRTRERREHLRD
HHHHHCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
YCIFLYYSGMRPGEAMNLQNRDIHINDTANGEETVILDLNEGKTGERDVVAMPEVADAIR
HEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHHHHH
RLRKREIATGPNDFLFINERGEKLGVPSATFSRMLEDLYLEKEADLRIGRTKQKRTPYSL
HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
RHTYADTRLMEGDVNVFDLSENMGTSVQMIKHHYKHARNSAKAKELTHVKPEFRPKTGTV
HHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCH
EQLVDAARKAGRKTAKPKPKGHRFPYLVLAEDEE
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA