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The map label for this gene is 83312772

Identifier: 83312772

GI number: 83312772

Start: 4034862

End: 4035317

Strand: Reverse

Name: 83312772

Synonym: amb3674

Alternate gene names: NA

Gene position: 4035317-4034862 (Counterclockwise)

Preceding gene: 83312774

Following gene: 83312771

Centisome position: 81.24

GC content: 62.5

Gene sequence:

>456_bases
ATGACCCAGATCGGCTTCTATCACCTGATGCGCTTGCCCCTGGAGCAGGCATTGCCCAAGCTGCTGGACAAGGCGCTGGC
CGCCGGATTCCGCGCCGTGGTGCTGGCCGGCTCGCCCGAGCGGGTCGAAGCCCTGAACGACCGCCTGTGGACCTATGAGC
CGGAGTCCTGGCTGCCCCATGGCTCGGCCAGGGACGGCGAGCCCGAAATGCAACCCATCTGGTTAACCCATTCGGACGAG
AATCCCAACGGTGCCACCATCCTAGTGATGTGCGACGGCGCTTCTTCGGAAAAGGTGGGGGCGTATCAGCGCGGCCTCGA
TCTGTTCGACGGCAACGACCCGGACGCGGTCGAGAAGGCTCGGGAGCGCTGGAAGCGATGGAAATCCGAAGGTCATCAAT
TGGTCTATTACCAGCAAGGGGAGAGCGGCGGATGGGTGGAAAAATCAAGGACTTAG

Upstream 100 bases:

>100_bases
GCGGGTCACCTTGTAGCAGGGAATGATCACGGCGATCGTCATGATGGTGGGATTATACCCACGGCTCGCCGGAACGCCAT
TCCCATGGTAAAGGAGAAGC

Downstream 100 bases:

>100_bases
TGAATACACAATCATTACACATTGCCCGAAATCGGACGCTAAAGTAGTGTTTAATACACAGTCATTACACAGAAATGCGG
TTGCGTTAGCTTTGTGATTT

Product: DNA polymerase III subunit chi

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTQIGFYHLMRLPLEQALPKLLDKALAAGFRAVVLAGSPERVEALNDRLWTYEPESWLPHGSARDGEPEMQPIWLTHSDE
NPNGATILVMCDGASSEKVGAYQRGLDLFDGNDPDAVEKARERWKRWKSEGHQLVYYQQGESGGWVEKSRT

Sequences:

>Translated_151_residues
MTQIGFYHLMRLPLEQALPKLLDKALAAGFRAVVLAGSPERVEALNDRLWTYEPESWLPHGSARDGEPEMQPIWLTHSDE
NPNGATILVMCDGASSEKVGAYQRGLDLFDGNDPDAVEKARERWKRWKSEGHQLVYYQQGESGGWVEKSRT
>Mature_150_residues
TQIGFYHLMRLPLEQALPKLLDKALAAGFRAVVLAGSPERVEALNDRLWTYEPESWLPHGSARDGEPEMQPIWLTHSDEN
PNGATILVMCDGASSEKVGAYQRGLDLFDGNDPDAVEKARERWKRWKSEGHQLVYYQQGESGGWVEKSRT

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007459 [H]

Pfam domain/function: PF04364 DNA_pol3_chi [H]

EC number: 2.7.7.7

Molecular weight: Translated: 17054; Mature: 16923

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIGFYHLMRLPLEQALPKLLDKALAAGFRAVVLAGSPERVEALNDRLWTYEPESWLPH
CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCC
GSARDGEPEMQPIWLTHSDENPNGATILVMCDGASSEKVGAYQRGLDLFDGNDPDAVEKA
CCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHH
RERWKRWKSEGHQLVYYQQGESGGWVEKSRT
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TQIGFYHLMRLPLEQALPKLLDKALAAGFRAVVLAGSPERVEALNDRLWTYEPESWLPH
CCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCC
GSARDGEPEMQPIWLTHSDENPNGATILVMCDGASSEKVGAYQRGLDLFDGNDPDAVEKA
CCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHHHH
RERWKRWKSEGHQLVYYQQGESGGWVEKSRT
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]